Systematic Analysis of the Phosphoproteome and Kinase-substrate Networks in the Mouse Testis

Phosphoproteomics-based network medicine

(2013) Zexian Liu et al.   FEBS Journal

The Mouse Genome Database: integration of and access to knowledge about the laboratory mouse

(2013) Judith A. Blake et al.   NUCLEIC ACIDS RESEARCH

Polo kinase Cdc5 is a central regulator of meiosis I

(2013) M. A. Attner et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Scanning of novel cancer/testis proteins by human testis proteomic analysis

(2013) Mingxi Liu et al.   PROTEOMICS

Kinase-Substrate Enrichment Analysis Provides Insights into the Heterogeneity of Signaling Pathway Activation in Leukemia Cells

(2013) P. Casado et al.   Science Signaling

Testicular phosphoproteome in perfluorododecanoic acid-exposed rats

(2013) Zhimin Shi et al.   TOXICOLOGY LETTERS

In Vivo SILAC-Based Proteomics Reveals Phosphoproteome Changes during Mouse Skin Carcinogenesis

(2013) Sara Zanivan et al.   Cell Reports

Systematic analysis of the Plk-mediated phosphoregulation in eukaryotes

(2012) Z. Liu et al.   BRIEFINGS IN BIOINFORMATICS

Computational Analysis of Phosphoproteomics: Progresses and Perspectives

(2012) Jian Ren et al.   CURRENT PROTEIN & PEPTIDE SCIENCE

Sperm phosphoproteomics: historical perspectives and current methodologies

(2012) James R Porambo et al.   Expert Review of Proteomics

Polo-like kinase is required for synaptonemal complex disassembly and phosphorylation in mouse spermatocytes

(2012) P. W. Jordan et al.   JOURNAL OF CELL SCIENCE

Phosphorylation network dynamics in the control of cell cycle transitions

(2012) D. Fisher et al.   JOURNAL OF CELL SCIENCE

Sperm phosphoproteome profiling by ultra performance liquid chromatography followed by data independent analysis (LC–MSE) reveals altered proteomic signatures in asthenozoospermia

(2012) Priyanka P. Parte et al.   Journal of Proteomics

Systematic Analysis of Protein Phosphorylation Networks From Phosphoproteomic Data

(2012) Chunxia Song et al.   MOLECULAR & CELLULAR PROTEOMICS

Making PTMs a priority

(2012) Allison Doerr   NATURE METHODS

SpermatogenesisOnline 1.0: a resource for spermatogenesis based on manual literature curation and genome-wide data mining

(2012) Yuanwei Zhang et al.   NUCLEIC ACIDS RESEARCH

The Proteomics Identifications (PRIDE) database and associated tools: status in 2013

(2012) Juan Antonio Vizcaíno et al.   NUCLEIC ACIDS RESEARCH

Update on activities at the Universal Protein Resource (UniProt) in 2013

(2012)   NUCLEIC ACIDS RESEARCH

From Plk1 to Plk5

(2011) Guillermo de Cárcer et al.   CELL CYCLE

Cytoscape 2.8: new features for data integration and network visualization

(2010) M. E. Smoot et al.   BIOINFORMATICS

A Tissue-Specific Atlas of Mouse Protein Phosphorylation and Expression

(2010) Edward L. Huttlin et al.   CELL

A Summary of Computational Resources for Protein Phosphorylation

(2010) Yu Xue et al.   CURRENT PROTEIN & PEPTIDE SCIENCE

Investigation of Human Testis Protein Heterogeneity Using 2-Dimensional Electrophoresis

(2010) X. Guo et al.   JOURNAL OF ANDROLOGY

Use of Titanium Dioxide To Find Phosphopeptide and Total Protein Changes During Epididymal Sperm Maturation

(2010) Mark A. Baker et al.   JOURNAL OF PROTEOME RESEARCH

QuickGO: a web-based tool for Gene Ontology searching

(2009) D. Binns et al.   BIOINFORMATICS

CDK2 is required for proper homologous pairing, recombination and sex-body formation during male mouse meiosis

(2009) A. Viera et al.   JOURNAL OF CELL SCIENCE

Effect of Peptide-to-TiO2Beads Ratio on Phosphopeptide Enrichment Selectivity

(2009) Qing-run Li et al.   JOURNAL OF PROTEOME RESEARCH

Label-Free Quantitation of Phosphopeptide Changes During Rat Sperm Capacitation

(2009) Mark A. Baker et al.   JOURNAL OF PROTEOME RESEARCH

Sensitive multiplexed analysis of kinase activities and activity-based kinase identification

(2009) Kazuishi Kubota et al.   NATURE BIOTECHNOLOGY

ToppGene Suite for gene list enrichment analysis and candidate gene prioritization

(2009) J. Chen et al.   NUCLEIC ACIDS RESEARCH

A site-specific, multiplexed kinase activity assay using stable-isotope dilution and high-resolution mass spectrometry

(2009) Yonghao Yu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mitogen-activated protein kinases in male reproductive function

(2009) Michelle W.M. Li et al.   TRENDS IN MOLECULAR MEDICINE

Polo-like kinase-1 is activated by aurora A to promote checkpoint recovery

(2008) Libor Macůrek et al.   NATURE

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

(2008) Jürgen Cox et al.   NATURE BIOTECHNOLOGY

The SCX/IMAC enrichment approach for global phosphorylation analysis by mass spectrometry

(2008) Judit Villén et al.   Nature Protocols

Analysis of the human testis proteome by mass spectrometry and bioinformatics

(2008) Xuejiang Guo et al.   Proteomics Clinical Applications