ROSics: Chemistry and proteomics of cysteine modifications in redox biology

Structure of Nm23-H1 under oxidative conditions

(2013) Mi-Sun Kim et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Cysteine-Mediated Redox Signaling: Chemistry, Biology, and Tools for Discovery

(2013) Candice E. Paulsen et al.   CHEMICAL REVIEWS

Reversible inactivation of deubiquitinases by reactive oxygen species in vitro and in cells

(2013) Jin-Gu Lee et al.   Nature Communications

Redox Regulation of Epidermal Growth Factor Receptor Signaling through Cysteine Oxidation

(2012) Thu H. Truong et al.   BIOCHEMISTRY

Order out of Disorder: Working Cycle of an Intrinsically Unfolded Chaperone

(2012) Dana Reichmann et al.   CELL

Reactive oxygen species (ROS) homeostasis and redox regulation in cellular signaling

(2012) Paul D. Ray et al.   CELLULAR SIGNALLING

Endothelial Cell Palmitoylproteomic Identifies Novel Lipid-Modified Targets and Potential Substrates for Protein Acyl Transferases

(2012) Ethan P. Marin et al.   CIRCULATION RESEARCH

Oxidative Stress Responses Involve Oxidation of a Conserved Ubiquitin Pathway Enzyme

(2012) K. S. Doris et al.   MOLECULAR AND CELLULAR BIOLOGY

Upsides and Downsides of Reactive Oxygen Species for Cancer: The Roles of Reactive Oxygen Species in Tumorigenesis, Prevention, and Therapy

(2011) Subash C. Gupta et al.   ANTIOXIDANTS & REDOX SIGNALING

15-Deoxy-Δ12,14-prostaglandin J2, an electrophilic lipid mediator of anti-inflammatory and pro-resolving signaling

(2011) Young-Joon Surh et al.   BIOCHEMICAL PHARMACOLOGY

Global Proteomic Assessment of the Classical Protein-Tyrosine Phosphatome and “Redoxome”

(2011) Robert Karisch et al.   CELL

Purification and identification of endogenous polySUMO conjugates

(2011) Roland Bruderer et al.   EMBO REPORTS

Generation of reactive oxygen species (ROS) is a key factor for stimulation of macrophage proliferation by ceramide 1-phosphate

(2011) Lide Arana et al.   EXPERIMENTAL CELL RESEARCH

Protein sulfenic acid formation: From cellular damage to redox regulation

(2011) Goedele Roos et al.   FREE RADICAL BIOLOGY AND MEDICINE

Analysis and Functional Prediction of Reactive Cysteine Residues

(2011) Stefano M. Marino et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Fast Multi-blind Modification Search through Tandem Mass Spectrometry

(2011) Seungjin Na et al.   MOLECULAR & CELLULAR PROTEOMICS

Regulation of reactive oxygen species generation in cell signaling

(2011) Yun Soo Bae et al.   MOLECULES AND CELLS

Global profiling of dynamic protein palmitoylation

(2011) Brent R Martin et al.   NATURE METHODS

Systemic Analysis of Heat Shock Response Induced by Heat Shock and a Proteasome Inhibitor MG132

(2011) Hee-Jung Kim et al.   PLoS One

Proteome-Wide Mapping of the Drosophila Acetylome Demonstrates a High Degree of Conservation of Lysine Acetylation

(2011) B. T. Weinert et al.   Science Signaling

Methods for converting cysteine to dehydroalanine on peptides and proteins

(2011) Justin M. Chalker et al.   Chemical Science

Redox regulation of the stability of the SUMO protease SENP3 via interactions with CHIP and Hsp90

(2010) Shan Yan et al.   EMBO JOURNAL

The Protein-disulfide Isomerase DsbC Cooperates with SurA and DsbA in the Assembly of the Essential β-Barrel Protein LptD

(2010) Katleen Denoncin et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

In VivoIdentification of Sumoylation Sites by a Signature Tag and Cysteine-targeted Affinity Purification

(2010) Henri A. Blomster et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Proteomic Profiling of Perturbed Protein Sulfenation in Renal Medulla of the Spontaneously Hypertensive Rat

(2010) Raymond Tyther et al.   JOURNAL OF PROTEOME RESEARCH

Combined Proteomic Approaches for the Identification of Specific Amino Acid Residues Modified by 4-Hydroxy-2-Nonenal under Physiological Conditions

(2010) Darío Méndez et al.   JOURNAL OF PROTEOME RESEARCH

Nucleophilicity and Nucleofugality of Phenylsulfinate (PhSO2−): A Key to Understanding its Ambident Reactivity

(2010) Mahiuddin Baidya et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Cysteine tagging for MS-based proteomics

(2010) Priscille Giron et al.   MASS SPECTROMETRY REVIEWS

Novel Oxidative Modifications in Redox-Active Cysteine Residues

(2010) Jaeho Jeong et al.   MOLECULAR & CELLULAR PROTEOMICS

A Novel Proteomics Approach to Identify SUMOylated Proteins and Their Modification Sites in Human Cells

(2010) Frederic Galisson et al.   MOLECULAR & CELLULAR PROTEOMICS

Mass Spectrometric Analysis of Lysine Ubiquitylation Reveals Promiscuity at Site Level

(2010) Jannie M. R. Danielsen et al.   MOLECULAR & CELLULAR PROTEOMICS

Quantitative reactivity profiling predicts functional cysteines in proteomes

(2010) Eranthie Weerapana et al.   NATURE

Generation of acetyllysine antibodies and affinity enrichment of acetylated peptides

(2010) Kun-Liang Guan et al.   Nature Protocols

Cyclopentenone prostaglandin-induced unfolding and aggregation of the Parkinson disease-associated UCH-L1

(2010) L. M. I. Koharudin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Quantitative phosphoproteomic analysis reveals cAMP/vasopressin-dependent signaling pathways in native renal thick ascending limb cells

(2010) R. Gunaratne et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Extensive Crosstalk Between O-GlcNAcylation and Phosphorylation Regulates Cytokinesis

(2010) Z. Wang et al.   Science Signaling

Quantitative Phosphoproteomics Reveals Widespread Full Phosphorylation Site Occupancy During Mitosis

(2010) J. V. Olsen et al.   Science Signaling

Mining the Thiol Proteome for Sulfenic Acid Modifications Reveals New Targets for Oxidation in Cells

(2009) Stephen E. Leonard et al.   ACS Chemical Biology

NOX Enzymes in the Central Nervous System: From Signaling to Disease

(2009) Silvia Sorce et al.   ANTIOXIDANTS & REDOX SIGNALING

Oxidative modifications of glyceraldehyde-3-phosphate dehydrogenase play a key role in its multiple cellular functions

(2009) Na Rae Hwang et al.   BIOCHEMICAL JOURNAL

N-Tosyl-l-phenylalanine Chloromethyl Ketone Inhibits NF-κB Activation by Blocking Specific Cysteine Residues of IκB Kinase β and p65/RelA

(2009) Kyung-Ho Ha et al.   BIOCHEMISTRY

Redox-Regulated Chaperones

(2009) Caroline Kumsta et al.   BIOCHEMISTRY

Chemical Modification of Proteins at Cysteine: Opportunities in Chemistry and Biology

(2009) Justin M. Chalker et al.   Chemistry-An Asian Journal

Protein Cysteine Modifications: (2) Reactivity Specificity and Topics of Medicinal Chemistry and Protein Engineering

(2009) N. Nagahara et al.   CURRENT MEDICINAL CHEMISTRY

Efficient Substitution Reaction from Cysteine to the Serine Residue of Glycosylated Polypeptide: Repetitive Peptide Segment Ligation Strategy and the Synthesis of Glycosylated Tetracontapeptide Having Acid Labile Sialyl-TNAntigens

(2009) Ryo Okamoto et al.   JOURNAL OF ORGANIC CHEMISTRY

New Algorithm for the Identification of Intact Disulfide Linkages Based on Fragmentation Characteristics in Tandem Mass Spectra

(2009) Seonhwa Choi et al.   JOURNAL OF PROTEOME RESEARCH

Facile Formation of Dehydroalanine FromS-Nitrosocysteines

(2009) Hua Wang et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Reactive oxygen species prime Drosophila haematopoietic progenitors for differentiation

(2009) Edward Owusu-Ansah et al.   NATURE

Redox-sensitive cysteines bridge p300/CBP-mediated acetylation and FoxO4 activity

(2009) Tobias B Dansen et al.   Nature Chemical Biology

Catalyst-Free Alkylation of Sulfinic Acids with Sulfonamides via sp3C−N Bond Cleavage at Room Temperature

(2009) Cong-Rong Liu et al.   ORGANIC LETTERS

Multiple Functions of Nm23-H1 Are Regulated by Oxido-Reduction System

(2009) Eunsun Lee et al.   PLoS One

Profiling protein thiol oxidation in tumor cells using sulfenic acid-specific antibodies

(2009) Y. H. Seo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Analytical strategies for phosphoproteomics

(2009) Tine E. Thingholm et al.   PROTEOMICS

Lysine Acetylation Targets Protein Complexes and Co-Regulates Major Cellular Functions

(2009) C. Choudhary et al.   SCIENCE

Thiol-Based Redox Switches in Eukaryotic Proteins

(2008) Nicolas Brandes et al.   ANTIOXIDANTS & REDOX SIGNALING

Reactive oxygen species in tumor metastasis

(2008) Makiya Nishikawa   CANCER LETTERS

A Redox-Dependent Pathway for Regulating Class II HDACs and Cardiac Hypertrophy

(2008) Tetsuro Ago et al.   CELL

Identification of a Novel Palmitylation Site Essential for Membrane Association and Isomerohydrolase Activity of RPE65

(2008) Yusuke Takahashi et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Strategy for Comprehensive Identification of Post-translational Modifications in Cellular Proteins, Including Low Abundant Modifications: Application to Glyceraldehyde-3-phosphate Dehydrogenase

(2008) Jawon Seo et al.   JOURNAL OF PROTEOME RESEARCH

Unrestrictive Identification of Multiple Post-translational Modifications from Tandem Mass Spectrometry Using an Error-tolerant Algorithm Based on an Extended Sequence Tag Approach

(2008) Seungjin Na et al.   MOLECULAR & CELLULAR PROTEOMICS

A quantitative atlas of mitotic phosphorylation

(2008) N. Dephoure et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Functional site profiling and electrostatic analysis of cysteines modifiable to cysteine sulfenic acid

(2008) Freddie R. Salsbury et al.   PROTEIN SCIENCE

15-Deoxy-Δ12,14-prostaglandin J2: An Electrophilic Trigger of Cellular Responses

(2007) Koji Uchida et al.   CHEMICAL RESEARCH IN TOXICOLOGY

Molecular basis of the redox regulation of SUMO proteases: a protective mechanism of intermolecular disulfide linkage against irreversible sulfhydryl oxidation

(2007) Zheng Xu et al.   FASEB JOURNAL