Noninvasive monitoring of infection and rejection after lung transplantation

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Deep sequencing: Becoming a critical tool in clinical virology

(2014) Miguel E. Quiñones-Mateu et al.   JOURNAL OF CLINICAL VIROLOGY

Torque Teno Virus Viremia Correlates With Intensity of Maintenance Immunosuppression in Adult Orthotopic Liver Transplant

(2014) Daniele Focosi et al.   JOURNAL OF INFECTIOUS DISEASES

Actionable Diagnosis of Neuroleptospirosis by Next-Generation Sequencing

(2014) Michael R. Wilson et al.   NEW ENGLAND JOURNAL OF MEDICINE

Detection of Circulating Tumor DNA in Early- and Late-Stage Human Malignancies

(2014) C. Bettegowda et al.   Science Translational Medicine

Circulating Cell-Free DNA Enables Noninvasive Diagnosis of Heart Transplant Rejection

(2014) I. De Vlaminck et al.   Science Translational Medicine

Human Herpesviruses 6, 7 and 8 in Solid Organ Transplant Recipients

(2013) R. R. Razonable   AMERICAN JOURNAL OF TRANSPLANTATION

Temporal Response of the Human Virome to Immunosuppression and Antiviral Therapy

(2013) Iwijn De Vlaminck et al.   CELL

Next-generation sequencing technologies in diagnostic virology

(2013) Luisa Barzon et al.   JOURNAL OF CLINICAL VIROLOGY

The Registry of the International Society for Heart and Lung Transplantation: Thirtieth Adult Lung and Heart-Lung Transplant Report—2013; Focus Theme: Age

(2013) Roger D. Yusen et al.   JOURNAL OF HEART AND LUNG TRANSPLANTATION

AIDS Alters the Commensal Plasma Virome

(2013) L. Li et al.   JOURNAL OF VIROLOGY

Analysis of Circulating Tumor DNA to Monitor Metastatic Breast Cancer

(2013) Sarah-Jane Dawson et al.   NEW ENGLAND JOURNAL OF MEDICINE

Lung-enriched Organisms and Aberrant Bacterial and Fungal Respiratory Microbiota after Lung Transplant

(2012) Emily S. Charlson et al.   AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE

Structure, function and diversity of the healthy human microbiome

(2012)   NATURE

Metagenomic microbial community profiling using unique clade-specific marker genes

(2012) Nicola Segata et al.   NATURE METHODS

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Emerging view of the human virome

(2012) Kristine M. Wylie et al.   Translational Research

Pathologic Interpretation of Transbronchial Biopsy for Acute Rejection of Lung Allograft Is Highly Variable

(2011) S. M. Arcasoy et al.   AMERICAN JOURNAL OF TRANSPLANTATION

Solid Organ Allograft Survival Improvement in the United States: The Long-Term Does Not Mirror the Dramatic Short-Term Success

(2011) S. A. Lodhi et al.   AMERICAN JOURNAL OF TRANSPLANTATION

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Pulmonary Complications of Lung Transplantation

(2011) Shahzad Ahmad et al.   CHEST

The Registry of the International Society for Heart and Lung Transplantation: Twenty-eighth Adult Heart Transplant Report—2011

(2011) Josef Stehlik et al.   JOURNAL OF HEART AND LUNG TRANSPLANTATION

Accurate Genome Relative Abundance Estimation Based on Shotgun Metagenomic Reads

(2011) Li C. Xia et al.   PLoS One

Universal noninvasive detection of solid organ transplant rejection

(2011) T. M. Snyder et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cardiomyogenesis in the Adult Human Heart

(2010) Jan Kajstura et al.   CIRCULATION RESEARCH

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Redefining Chronic Viral Infection

(2009) Herbert W. Virgin et al.   CELL

Evidence for Cardiomyocyte Renewal in Humans

(2009) Olaf Bergmann et al.   SCIENCE

Adenoviruses in Immunocompromised Hosts

(2008) M. Echavarria   CLINICAL MICROBIOLOGY REVIEWS

Noninvasive diagnosis of fetal aneuploidy by shotgun sequencing DNA from maternal blood

(2008) H. C. Fan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA