4.6 Article

Performance of Quasi-Degenerate Scaled Opposite Spin Perturbation Corrections to Single Excitation Configuration Interaction for Excited State Structures and Excitation Energies with Application to the Stokes Shift of 9-Methyl-9,10-dihydro-9-silaphenanthrene

期刊

JOURNAL OF PHYSICAL CHEMISTRY A
卷 113, 期 39, 页码 10564-10576

出版社

AMER CHEMICAL SOC
DOI: 10.1021/jp903659u

关键词

-

资金

  1. U.S. Department of Energy [DE-AC0376SF00098]
  2. NERSC
  3. Korea Institute of Science and Technology Information (KISTI) [KSC-2009-S01-0008]
  4. Fulbright Fellowship

向作者/读者索取更多资源

The quasi-degenerate scaled opposite spin perturbation correction to single excitation configuration interaction (SOS-CIS(D-0)) is a promising electronic structure method that can describe electronically excited states of sizable molecular systems. In this article, we report an assessment of the performance of SOS-CIS(DD0) for adiabatic electronic transition energies and excited state equilibrium geometries for various small molecules. These tests allow optimization of the empirical scaling parameter in SOS-CIS(DD0), and it is shown that one universal scaling parameter (chosen as 1.4) can satisfactorily reproduce the experimental results for all the tested molecules. The method is then applied to examine the large Stokes shift observed with a dihydrosilaphenanthrene derivative. The main features of the experimental absorption and emission spectra of this molecule are well reproduced by SOS-CIS(D-0).

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.6
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

Review Chemistry, Organic

Deciphering the role of (anti)aromaticity in cofacial excimers of linear acenes

Akhilesh Krishnan, Aitor Diaz-Andres, Keerthy P. Sudhakaran, Athira T. John, Mahesh Hariharan, David Casanova

Summary: Excited state aromaticity is an important area of research, and this review focuses on the aromatic stabilization in spin singlet excimer and through-space aromatic character in triplet excimers of a series of linear [n]acenes. The study investigates the aromatic stabilization profile of singlet benzene excimer formation and the through-space ring current in triplet cofacial excimers. The results provide insights into the (anti)aromatic properties of polycyclic aromatic hydrocarbon excimers and their connection to the electronic structure.

JOURNAL OF PHYSICAL ORGANIC CHEMISTRY (2023)

Article Chemistry, Multidisciplinary

Synthesis of a Dicyclohepta[a,g]heptalene-Containing Polycyclic Conjugated Hydrocarbon and the Impact of Non-Alternant Topologies

Junting Wang, Fernando Gordillo Gamez, Jose Marin-Beloqui, Aitor Diaz-Andres, Xiaohe Miao, David Casanova, Juan Casado, Junzhi Liu

Summary: We report the first bottom-up synthesis of a dicyclohepta[a,g]heptalene-embedded polycyclic conjugated hydrocarbon (PCH) with four continuous heptagons. Compound 1 exhibits a distinct antiaromatic character, especially the inner heptalene core. Furthermore, PCH 1 has a narrower highest occupied molecular orbital (HOMO)-lowest unoccupied molecular orbital (LUMO) energy gap compared to its benzenoid counterpart, as confirmed by experimental measurements and theoretical calculations. This work not only provides a new method to synthesize PCHs with non-alternant topologies but also offers the potential to tune their electronic and optical properties.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2023)

Article Chemistry, Multidisciplinary

Molecular mechanism of binding between a therapeutic RNA aptamer and its protein target VEGF: A molecular dynamics study

Mahroof Kalathingal, Young Min Rhee

Summary: Macugen is a therapeutic RNA aptamer that specifically binds to the heparin binding domain (HBD) of VEGF165 to inhibit angiogenesis. Molecular dynamics simulations reveal that Macugen recognizes HBD through an induced-fit mechanism, resulting in major conformational changes in Macugen, while HBD recognizes Macugen through a conformational selection mechanism.

JOURNAL OF COMPUTATIONAL CHEMISTRY (2023)

Article Chemistry, Physical

Stable Room Temperature Nitrenes Created by Photolysis of Crystalline 4-Azido-2,3,5,6-tetrafluorobenzoic Acid

Thomas J. Gately, Roberto A. Boto, Michael J. Tauber, David Casanova, Christopher J. Bardeen

Summary: The structure, spectroscopy, and photochemistry of two compounds, 4-azidobenzoic acid (4ABC) and 4-azido-2,3,5,6-tetrafluorobenzoic acid (4F4ABC), were characterized in frozen glasses and crystals. Photolysis of the parent compounds produced nitrenes and other spin species, with higher yield of triplet nitrene in 4F4ABC and higher yield of quintet nitrene in 4ABC. The stability of the nitrene in the 4F4ABC crystal, with a 1/e lifetime of 20 days at room temperature, provides potential for creating stable, solid-state nitrene samples for applications in spintronics and quantum information science.

JOURNAL OF PHYSICAL CHEMISTRY C (2023)

Article Chemistry, Multidisciplinary

Tuning the Diradical Character of Pentacene Derivatives via Non- Benzenoid Coupling Motifs

Tao Wang, Paula Angulo-Portugal, Alejandro Berdonces-Layunta, Andrej Jancarik, Andre Gourdon, Jan Holec, Manish Kumar, Diego Soler, Pavel Jelinek, David Casanova, Martina Corso, Dimas G. de Oteyza, Jan Patrick Calupitan

Summary: The coupling of a sterically demanded pentacene derivative on Au(111) into fused dimers connected by non-benzenoid rings was studied using high-resolution scanning tunneling microscopy/spectroscopy and density functional theory. The diradical character of the products was tuned by modifying the coupling section, with the antiaromaticity of cyclobutadiene and its position within the structure playing a significant role. Understanding these structure-property relationships is crucial for designing new complex and functional molecular structures.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2023)

Article Multidisciplinary Sciences

Elucidating activation and deactivation dynamics of VEGFR-2 transmembrane domain with coarse-grained molecular dynamics simulations

Yeon Ju Go, Mahroof Kalathingal, Young Min Rhee

Summary: This study investigated the activation and inactivation process of vascular endothelial growth factor receptor 2 (VEGFR-2) through coarse-grained molecular dynamics simulations. The results showed that the interconversion of helix structures and the change in crossing angle between helices are crucial for the transition from active to inactive TMD form. These findings not only shed light on the activation process of VEGFR-2, but also provide insights into the activation processes of other receptor tyrosine kinases.

PLOS ONE (2023)

Article Quantum Science & Technology

Orbital-optimized pair-correlated electron simulations on trapped-ion quantum computers

Luning Zhao, Joshua Goings, Kyujin Shin, Woomin Kyoung, Johanna I. Fuks, June-Koo Kevin Rhee, Young Min Rhee, Kenneth Wright, Jason Nguyen, Jungsang Kim, Sonika Johri

Summary: Variational quantum eigensolvers (VQE) are a promising approach for solving electronic structure problems on near-term quantum computers. In this work, an efficient quantum circuit implementation for orbital-optimized pair-correlated approximation to the unitary coupled cluster with singles and doubles (uCCSD) ansatz is reported. The method recovers additional electron correlation energy without sacrificing efficiency through measurements of low-order reduced density matrices (RDMs). The predicted relative energies across different molecular geometries on trapped-ion quantum computers are in excellent agreement with noise-free simulators.

NPJ QUANTUM INFORMATION (2023)

Article Chemistry, Physical

Kohn-Sham time-dependent density functional theory with Tamm-Dancoff approximation on massively parallel GPUs

Inkoo Kim, Daun Jeong, Won-Joon Son, Hyung-Jin Kim, Young Min Rhee, Yongsik Jung, Hyeonho Choi, Jinkyu Yim, Inkook Jang, Dae Sin Kim

Summary: We present a high-performance multi-GPU implementation of Kohn-Sham time-dependent density functional theory (TDDFT) within the Tamm-Dancoff approximation. Our algorithm scales optimally with material size on massively parallel computing systems, significantly reducing computational wall time. By performing a benchmark TDDFT study on a large green fluorescent protein complex, we demonstrated the efficiency of our approach, which utilized up to 256 GPUs on a state-of-the-art GPU computing system with Nvidia A100 GPUs. We believe that our GPU-oriented algorithms can enable first-principles simulations for very large-scale applications, leading to a deeper understanding of material behaviors and breakthrough designs.

NPJ COMPUTATIONAL MATERIALS (2023)

Article Chemistry, Multidisciplinary

A Single-Crystal Monomer to Single-Crystal Polymer Reaction Activated by a Triplet Excimer in a Zipper Mechanism

Lanxin Long, Samara Medina Rivero, Fanxi Sun, Dongsheng Wang, Dimitri Chekulaev, Claire Tonnele, David Casanova, Juan Casado, Yonghao Zheng

Summary: A combined experimental and theoretical study was conducted to elucidate the polymerization mechanism of a bisindenedione compound in the solid state. The study revealed the reaction pathway, starting from the formation of a triplet excimer state to an intermolecularly bonded triplet state that initiates the polymerization. Various spectroscopic techniques and quantum chemical calculations were employed to analyze the process. The presented mechanistic insight is valuable for understanding the complexity of this important reaction and for predicting and diversifying the resulting products.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2023)

Article Chemistry, Physical

State-Interaction Approach for Evaluating g-Tensors within EOM-CC and RAS-CI Frameworks: Theory and Benchmarks

Sven Kahler, Antonio Cebreiro-Gallardo, Pavel Pokhilko, David Casanova, Anna I. Krylov

Summary: Electron paramagnetic resonance (EPR) spectroscopy is an important technique for studying open-shell species. This study describes and benchmarks the state-interaction approach for calculating the coupling between molecular electronic spin and an external magnetic field (g-tensor), using response theory and restricted-active-space configuration interaction wave functions. The analysis confirms the accuracy and applicability of this approach while identifying important considerations.

JOURNAL OF PHYSICAL CHEMISTRY A (2023)

Article Chemistry, Physical

Efficient Modeling of Quantum Dynamics of Charge Carriers in Materials Using Short Nonequilibrium Molecular Dynamics

Bipeng Wang, Yifan Wu, Dongyu Liu, Andrey S. Vasenko, David Casanova, Oleg V. Prezhdo

Summary: Nonadiabatic molecular dynamics provides important insights into excited-state processes, and practical results can be obtained using short, partially equilibrated ab initio trajectories. This enables rapid exploration of excited-state dynamics for new materials.

JOURNAL OF PHYSICAL CHEMISTRY LETTERS (2023)

Article Chemistry, Multidisciplinary

Effect of choosing coordinate systems on computationally predicting nonradiative transition rates of flexible thermally activated delayed fluorescence molecules

Byeong Ki Min, Donggeon Kim, Dongwook Kim, Young Min Rhee

Summary: Understanding nonradiative transition mechanisms is important for designing optoelectronic materials. The correlation function formalism is a useful method for predicting nonradiative rate. Using internal coordinates can improve the reliability of nonradiative rate predictions, especially for transitions involving substantial structural changes.

BULLETIN OF THE KOREAN CHEMICAL SOCIETY (2023)

Article Chemistry, Multidisciplinary

Rational design of anti-Kasha photoemission from a biazulene core embedded in an antiaromatic/aromatic hybrid

Aitor Diaz-Andres, Jose Marin-Beloqui, Junting Wang, Junzhi Liu, Juan Casado, David Casanova

Summary: The violation of the Kasha photoemission rule in organic molecules has intrigued chemists. However, the relationship between the molecular structure and anti-Kasha property in organic materials has not been well-established. In this study, a novel strategy is introduced to design organic emitters from high excited states by combining intramolecular J-coupling of anti-Kasha chromophores with the hindering of vibrationally-induced non-radiative decay channels through molecular rigidity. The photophysical properties of a pre-designed chemical derivative are validated by steady fluorescence and transient absorption spectroscopy studies.

CHEMICAL SCIENCE (2023)

Article Chemistry, Physical

Correlation vs. exchange competition drives the singlet-triplet excited-state inversion in non-alternant hydrocarbons

M. E. Sandoval-Salinas, G. Ricci, A. J. Perez-Jimenez, D. Casanova, Y. Olivier, J. C. Sancho-Garcia

Summary: In this work, we investigate the driving force and energy inversion mechanism behind the S-1-T-1 excited-state energy inversion of two non-benzenoid non-alternant hydrocarbons. By utilizing state-of-the-art calculations and post-HF methods, we accurately predict and analyze the delicate interplay between structural and electronic factors that induce inversion. The results obtained highlight the importance of theoretical methods in guiding and rationalizing the search for molecules violating Hund's rule.

PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2023)

Article Chemistry, Multidisciplinary

Electron-Binding Dynamics of the Dipole-Bound State: Correlation Effect on the Autodetachment Dynamics

Do Hyung Kang, Kwang Hyun Cho, Jinwoo Kim, Han Jun Eun, Young Min Rhee, Sang Kyu Kim

Summary: The nature of electron-binding forces in dipole-bound states of anions was examined through experimental and theoretical investigations. It was found that the conventional charge-dipole electrostatic potential alone could not rationalize the observed autodetachment dynamics. Nonclassical electron correlation and interaction among electrons played a significant role in the binding of excess electrons to the neutral core.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2023)

暂无数据