Omics on bioleaching: current and future impacts

Comparison of environmental and isolate Sulfobacillus genomes reveals diverse carbon, sulfur, nitrogen, and hydrogen metabolisms

(2015) Nicholas B Justice et al.   BMC GENOMICS

Stoichiometric model and flux balance analysis for a mixed culture ofLeptospirillum ferriphilumandFerroplasma acidiphilum

(2014) M. P. Merino et al.   BIOTECHNOLOGY PROGRESS

Variation in microbial community from predominantly mesophilic to thermotolerant and moderately thermophilic species in an industrial copper heap bioleaching operation

(2014) Mauricio Acosta et al.   HYDROMETALLURGY

Elevated temperature alters proteomic responses of individual organisms within a biofilm community

(2014) Annika C Mosier et al.   ISME Journal

New Copper Resistance Determinants in the Extremophile Acidithiobacillus ferrooxidans: A Quantitative Proteomic Analysis

(2014) Rodrigo J. Almárcegui et al.   JOURNAL OF PROTEOME RESEARCH

Analysis of Anoxybacillus Genomes from the Aspects of Lifestyle Adaptations, Prophage Diversity, and Carbohydrate Metabolism

(2014) Kian Mau Goh et al.   PLoS One

Comparative Genome Analysis Reveals Metabolic Versatility and Environmental Adaptations of Sulfobacillus thermosulfidooxidans Strain ST

(2014) Xue Guo et al.   PLoS One

A new genome of Acidithiobacillus thiooxidans provides insights into adaptation to a bioleaching environment

(2014) Dante Travisany et al.   RESEARCH IN MICROBIOLOGY

Progress in bioleaching: fundamentals and mechanisms of bacterial metal sulfide oxidation—part A

(2013) Mario Vera et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Stoichiometric modeling of oxidation of reduced inorganic sulfur compounds (Riscs) inAcidithiobacillus thiooxidans

(2013) Roberto A. Bobadilla Fazzini et al.   BIOTECHNOLOGY AND BIOENGINEERING

DNA: Celebrate the unknowns

(2013) Philip Ball   NATURE

Account for the 'dark matter' of biology

(2013) Ajit Varki   NATURE

Shotgun proteomics study of early biofilm formation process ofAcidithiobacillus ferrooxidansATCC 23270 on pyrite

(2013) Mario Vera et al.   PROTEOMICS

Flavin Electron Shuttles Dominate Extracellular Electron Transfer by Shewanella oneidensis

(2013) N. J. Kotloski et al.   mBio

Metabolites Associated with Adaptation of Microorganisms to an Acidophilic, Metal-Rich Environment Identified by Stable-Isotope-Enabled Metabolomics

(2013) A. C. Mosier et al.   mBio

Analysis of bacterial biofilms using NMR-based metabolomics

(2012) Bo Zhang et al.   Future Medicinal Chemistry

Metabolomic study of Chilean biomining bacteria Acidithiobacillus ferrooxidans strain Wenelen and Acidithiobacillus thiooxidans strain Licanantay

(2012) Patricio Martínez et al.   Metabolomics

Acidithiobacillus caldus Sulfur Oxidation Model Based on Transcriptome Analysis between the Wild Type and Sulfur Oxygenase Reductase Defective Mutant

(2012) Linxu Chen et al.   PLoS One

A genomic island provides Acidithiobacillus ferrooxidans ATCC 53993 additional copper resistance: a possible competitive advantage

(2011) Luis H. Orellana et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Effects of Copper Exposure on Expression of Glutathione-Related Genes in Acidithiobacillus ferrooxidans

(2011) Jin-lan Xia et al.   CURRENT MICROBIOLOGY

Genomic insights into microbial iron oxidation and iron uptake strategies in extremely acidic environments

(2011) Violaine Bonnefoy et al.   ENVIRONMENTAL MICROBIOLOGY

Proteome changes in the initial bacterial colonist during ecological succession in an acid mine drainage biofilm community

(2011) Ryan S. Mueller et al.   ENVIRONMENTAL MICROBIOLOGY

Genomic analysis of Acidianus hospitalis W1 a host for studying crenarchaeal virus and plasmid life cycles

(2011) Xiao-Yan You et al.   EXTREMOPHILES

Quantitative proteomic analyses of the response of acidophilic microbial communities to different pH conditions

(2011) Christopher P Belnap et al.   ISME Journal

Genome Analyses of Icelandic Strains of Sulfolobus islandicus, Model Organisms for Genetic and Virus-Host Interaction Studies

(2011) L. Guo et al.   JOURNAL OF BACTERIOLOGY

Deuterium-exchange metabolomics identifies N-methyl lyso phosphatidylethanolamines as abundant lipids in acidophilic mixed microbial communities

(2011) Curt R. Fischer et al.   Metabolomics

Sulfur Metabolism in the Extreme Acidophile Acidithiobacillus Caldus

(2011) Stefanie Mangold et al.   Frontiers in Microbiology

The Genome Sequence of the Crenarchaeon Acidilobus saccharovorans Supports a New Order, Acidilobales, and Suggests an Important Ecological Role in Terrestrial Acidic Hot Springs

(2010) A. V. Mardanov et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Characterization of Extracellular Polymeric Substances from Acidophilic Microbial Biofilms

(2010) Y. Jiao et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Acidithiobacillus thiooxidans secretome containing a newly described lipoprotein Licanantase enhances chalcopyrite bioleaching rate

(2010) Roberto A. Bobadilla Fazzini et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Stoichiometric model and metabolic flux analysis for Leptospirillum ferrooxidans

(2010) M.P. Merino et al.   BIOTECHNOLOGY AND BIOENGINEERING

Microbial succession during a heap bioleaching cycle of low grade copper sulfides

(2010) C. Demergasso et al.   HYDROMETALLURGY

The biogeochemistry and microbiology of sulfidic mine waste and bioleaching dumps and heaps, and novel Fe(II)-oxidizing bacteria

(2010) A. Schippers et al.   HYDROMETALLURGY

Phylogenetic and genetic variation among Fe(II)-oxidizing acidithiobacilli supports the view that these comprise multiple species with different ferrous iron oxidation pathways

(2010) A. Amouric et al.   MICROBIOLOGY-SGM

Synthesis of 5-Hydroxyectoine from Ectoine: Crystal Structure of the Non-Heme Iron(II) and 2-Oxoglutarate-Dependent Dioxygenase EctD

(2010) Klaus Reuter et al.   PLoS One

Metabolome-Proteome Differentiation Coupled to Microbial Divergence

(2010) P. Wilmes et al.   mBio

Cultivation and quantitative proteomic analyses of acidophilic microbial communities

(2009) Christopher P Belnap et al.   ISME Journal

Dynamic of active microorganisms inhabiting a bioleaching industrial heap of low-grade copper sulfide ore monitored by real-time PCR and oligonucleotide prokaryotic acidophile microarray

(2009) Francisco Remonsellez et al.   Microbial Biotechnology

A stoichiometric model ofAcidithiobacillus ferrooxidansATCC 23270 for metabolic flux analysis

(2008) C. Hold et al.   BIOTECHNOLOGY AND BIOENGINEERING

Comparative genomic analysis of carbon and nitrogen assimilation mechanisms in three indigenous bioleaching bacteria: predictions and validations

(2008) Gloria Levicán et al.   BMC GENOMICS

Separation and mass spectrometry in microbial metabolomics

(2008) David E Garcia et al.   CURRENT OPINION IN MICROBIOLOGY

Proteomics-inferred genome typing (PIGT) demonstrates inter-population recombination as a strategy for environmental adaptation

(2008) Vincent J. Denef et al.   ENVIRONMENTAL MICROBIOLOGY

The diversity and abundance of bacteria inhabiting seafloor lavas positively correlate with rock alteration

(2008) Cara M. Santelli et al.   ENVIRONMENTAL MICROBIOLOGY