标题
Assigning and visualizing germline genes in antibody repertoires
作者
关键词
-
出版物
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
Volume 370, Issue 1676, Pages 20140240
出版商
The Royal Society
发表日期
2015-07-21
DOI
10.1098/rstb.2014.0240
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Quantifying evolutionary constraints on B-cell affinity maturation
- (2015) Connor O. McCoy et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Two Classes of Broadly Neutralizing Antibodies within a Single Lineage Directed to the High-Mannose Patch of HIV Envelope
- (2014) Katie J. Doores et al. JOURNAL OF VIROLOGY
- The promise and challenge of high-throughput sequencing of the antibody repertoire
- (2014) George Georgiou et al. NATURE BIOTECHNOLOGY
- High-resolution antibody dynamics of vaccine-induced immune responses
- (2014) Uri Laserson et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Bayesian Inference of Sampled Ancestor Trees for Epidemiology and Fossil Calibration
- (2014) Alexandra Gavryushkina et al. PLoS Computational Biology
- Convergent Antibody Signatures in Human Dengue
- (2013) Poornima Parameswaran et al. Cell Host & Microbe
- The antibody mining toolbox
- (2013) Sara D'Angelo et al. mAbs
- CodonPhyML: Fast Maximum Likelihood Phylogeny Estimation under Codon Substitution Models
- (2013) Manuel Gil et al. MOLECULAR BIOLOGY AND EVOLUTION
- IgBLAST: an immunoglobulin variable domain sequence analysis tool
- (2013) Jian Ye et al. NUCLEIC ACIDS RESEARCH
- Mining the antibodyome for HIV-1-neutralizing antibodies with next-generation sequencing and phylogenetic pairing of heavy/light chains
- (2013) J. Zhu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- IMGT/HighV QUEST paradigm for T cell receptor IMGT clonotype diversity and next generation repertoire immunoprofiling
- (2013) Shuo Li et al. Nature Communications
- The Effects of Somatic Hypermutation on Neutralization and Binding in the PGT121 Family of Broadly Neutralizing HIV Antibodies
- (2013) Devin Sok et al. PLoS Pathogens
- Models of Somatic Hypermutation Targeting and Substitution Based on Synonymous Mutations from High-Throughput Immunoglobulin Sequencing Data
- (2013) Gur Yaari et al. Frontiers in Immunology
- In Vivo VL-Targeted Microbial Superantigen Induced Global Shifts in the B Cell Repertoire
- (2012) C. Gronwall et al. JOURNAL OF IMMUNOLOGY
- Broad and potent neutralization of HIV-1 by a gp41-specific human antibody
- (2012) Jinghe Huang et al. NATURE
- MACSE: Multiple Alignment of Coding SEquences Accounting for Frameshifts and Stop Codons
- (2011) Vincent Ranwez et al. PLoS One
- Benchmarking the performance of human antibody gene alignment utilities using a 454 sequence dataset
- (2010) Katherine J. L. Jackson et al. BIOINFORMATICS
- SoDA2: a Hidden Markov Model approach for identification of immunoglobulin rearrangements
- (2010) S. Munshaw et al. BIOINFORMATICS
- DIVEIN: a web server to analyze phylogenies, sequence divergence, diversity, and informative sites
- (2010) Wenjie Deng et al. BIOTECHNIQUES
- pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree
- (2010) Frederick A Matsen et al. BMC BIOINFORMATICS
- An Evolutionary Model-Based Algorithm for Accurate Phylogenetic Breakpoint Mapping and Subtype Prediction in HIV-1
- (2009) Sergei L. Kosakovsky Pond et al. PLoS Computational Biology
- Ab-origin: an enhanced tool to identify the sourcing gene segments in germline for rearranged antibodies
- (2008) Xiaojing Wang et al. BMC BIOINFORMATICS
- IMGT/V-QUEST: the highly customized and integrated system for IG and TR standardized V-J and V-D-J sequence analysis
- (2008) X. Brochet et al. NUCLEIC ACIDS RESEARCH
- Estimating selection pressures on HIV-1 using phylogenetic likelihood models
- (2008) S. L. Kosakovsky Pond et al. STATISTICS IN MEDICINE
Create your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create NowAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started