Deep sequencing reveals important roles of microRNAs in response to drought and salinity stress in cotton

MicroRNA-Based Biotechnology for Plant Improvement

(2014) Baohong Zhang et al.   JOURNAL OF CELLULAR PHYSIOLOGY

A non-canonical plant microRNA target site

(2014) Cécile Brousse et al.   NUCLEIC ACIDS RESEARCH

Molecular cloning and functional characterization of a novel cotton CBL-interacting protein kinase gene (GhCIPK6) reveals its involvement in multiple abiotic stress tolerance in transgenic plants

(2013) Liangrong He et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Linkage mapping and expression analysis of miRNAs and their target genes during fiber development in cotton

(2013) Xuemei Chen et al.   BMC GENOMICS

Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells

(2013) Wei Xue et al.   BMC GENOMICS

A receptor-like kinase gene (GbRLK) from Gossypium barbadense enhances salinity and drought-stress tolerance in Arabidopsis

(2013) Jun Zhao et al.   BMC PLANT BIOLOGY

Response of miRNAs and their targets to salt and drought stresses in cotton (Gossypium hirsutum L.)

(2013) Min Wang et al.   GENE

Composition and Expression of Conserved MicroRNA Genes in Diploid Cotton (Gossypium) Species

(2013) Lei Gong et al.   Genome Biology and Evolution

Small RNA and degradome sequencing reveal complex miRNA regulation during cotton somatic embryogenesis

(2013) Xiyan Yang et al.   JOURNAL OF EXPERIMENTAL BOTANY

High-throughput deep sequencing shows that microRNAs play important roles in switchgrass responses to drought and salinity stress

(2013) Fuliang Xie et al.   PLANT BIOTECHNOLOGY JOURNAL

Genome-Wide Analysis of Small RNA and Novel MicroRNA Discovery during Fiber and Seed Initial Development in Gossypium hirsutum. L

(2013) Hua Zhang et al.   PLoS One

Cotton GhMKK1 Induces the Tolerance of Salt and Drought Stress, and Mediates Defence Responses to Pathogen Infection in Transgenic Nicotiana benthamiana

(2013) Wenjing Lu et al.   PLoS One

Comparative transcriptomic analysis of roots of contrasting Gossypium herbaceum genotypes revealing adaptation to drought

(2012) Alok Ranjan et al.   BMC GENOMICS

Drought, salt, and temperature stress-induced metabolic rearrangements and regulatory networks

(2012) J. Krasensky et al.   JOURNAL OF EXPERIMENTAL BOTANY

Identification and Analyses of miRNA Genes in Allotetraploid Gossypium hirsutum Fiber Cells Based on the Sequenced Diploid G. raimondii Genome

(2012) Qin Li et al.   Journal of Genetics and Genomics

Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres

(2012) Andrew H. Paterson et al.   NATURE

miRDeepFinder: a miRNA analysis tool for deep sequencing of plant small RNAs

(2012) Fuliang Xie et al.   PLANT MOLECULAR BIOLOGY

Identification and Characterization of MicroRNAs in Asiatic Cotton (Gossypium arboreum L.)

(2012) Min Wang et al.   PLoS One

The Histone H1 Variant Accumulates in Response to Water Stress in the Drought Tolerant Genotype of Gossypium herbaceum L.

(2012) Ila Trivedi et al.   PROTEIN JOURNAL

Balancing metabolites in drought: the sulfur assimilation conundrum

(2012) Kai Xun Chan et al.   TRENDS IN PLANT SCIENCE

Difference in miRNA expression profiles between two cotton cultivars with distinct salt sensitivity

(2011) Zujun Yin et al.   MOLECULAR BIOLOGY REPORTS

Signal transduction during cold, salt, and drought stresses in plants

(2011) Guo-Tao Huang et al.   MOLECULAR BIOLOGY REPORTS

Profiling of short RNAs during fleshy fruit development reveals stage-specific sRNAome expression patterns

(2011) Irina Mohorianu et al.   PLANT JOURNAL

A cotton group C MAP kinase gene, GhMPK2, positively regulates salt and drought tolerance in tobacco

(2011) Liang Zhang et al.   PLANT MOLECULAR BIOLOGY

Small RNA Profiling in Two Brassica napus Cultivars Identifies MicroRNAs with Oil Production- and Development-Correlated Expression and New Small RNA Classes

(2011) Y.-T. Zhao et al.   PLANT PHYSIOLOGY

Genome-Wide Functional Analysis of the Cotton Transcriptome by Creating an Integrated EST Database

(2011) Fuliang Xie et al.   PLoS One

Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa

(2011) Li Wei et al.   GENOME BIOLOGY

A draft physical map of a D-genome cotton species (Gossypium raimondii)

(2010) Lifeng Lin et al.   BMC GENOMICS

Identification of the family of aquaporin genes and their expression in upland cotton (Gossypium hirsutum L.)

(2010) Wonkeun Park et al.   BMC PLANT BIOLOGY

osa-MIR393: a salinity- and alkaline stress-related microRNA gene

(2010) Peng Gao et al.   MOLECULAR BIOLOGY REPORTS

Identification and analysis of seven H2O2-responsive miRNAs and 32 new miRNAs in the seedlings of rice (Oryza sativa L. ssp. indica)

(2010) Tian Li et al.   NUCLEIC ACIDS RESEARCH

Rfam: Wikipedia, clans and the "decimal" release

(2010) P. P. Gardner et al.   NUCLEIC ACIDS RESEARCH

miRBase: integrating microRNA annotation and deep-sequencing data

(2010) A. Kozomara et al.   NUCLEIC ACIDS RESEARCH

A set of miRNAs from Brassica napus in response to sulphate deficiency and cadmium stress

(2010) Si Qi Huang et al.   PLANT BIOTECHNOLOGY JOURNAL

GhMYB25-like: a key factor in early cotton fibre development

(2010) Sally-Ann Walford et al.   PLANT JOURNAL

MicroRNAs with macro-effects on plant stress responses

(2010) Ramanjulu Sunkar   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

A CitationRank algorithm inheriting Google technology designed to highlight genes responsible for serious adverse drug reaction

(2009) Lun Yang et al.   BIOINFORMATICS

Post-transcriptional gene regulation of salinity and drought responses by plant microRNAs

(2009) ALEJANDRA A. COVARRUBIAS et al.   PLANT CELL AND ENVIRONMENT

Genome-wide analysis reveals rapid and dynamic changes in miRNA and siRNA sequence and expression during ovule and fiber development in allotetraploid cotton (Gossypium hirsutum L.)

(2009) Mingxiong Pang et al.   GENOME BIOLOGY

CleaveLand: a pipeline for using degradome data to find cleaved small RNA targets

(2008) C. Addo-Quaye et al.   BIOINFORMATICS

The R2R3 MYB Transcription Factor GhMYB109 Is Required for Cotton Fiber Development

(2008) L. Pu et al.   GENETICS

Arabidopsis Protein Disulfide Isomerase-5 Inhibits Cysteine Proteases during Trafficking to Vacuoles before Programmed Cell Death of the Endothelium in Developing Seeds

(2008) C. Andeme Ondzighi et al.   PLANT CELL

Isolation of Rh-TIP1;1, an aquaporin gene and its expression in rose flowers in response to ethylene and water deficit

(2008) Jingqi Xue et al.   POSTHARVEST BIOLOGY AND TECHNOLOGY