Cytokinin-induced promotion of root meristem size in the fern Azolla supports a shoot-like origin of euphyllophyte roots

Adventitious Roots and Lateral Roots: Similarities and Differences

(2014) Catherine Bellini et al.   Annual Review of Plant Biology

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Directional Auxin Transport Mechanisms in Early Diverging Land Plants

(2014) Tom Viaene et al.   CURRENT BIOLOGY

Plasma Membrane-Targeted PIN Proteins Drive Shoot Development in a Moss

(2014) Tom A. Bennett et al.   CURRENT BIOLOGY

Transcriptomic Evidence for the Evolution of Shoot Meristem Function in Sporophyte-Dominant Land Plants through Concerted Selection of Ancestral Gametophytic and Sporophytic Genetic Programs

(2014) Margaret H. Frank et al.   MOLECULAR BIOLOGY AND EVOLUTION

Azolladomestication towards a biobased economy?

(2014) Paul Brouwer et al.   NEW PHYTOLOGIST

Phylotranscriptomic analysis of the origin and early diversification of land plants

(2014) Norman J. Wickett et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A roadmap to embryo identity in plants

(2014) Tatyana Radoeva et al.   TRENDS IN PLANT SCIENCE

De novo characterization of the gametophyte transcriptome in bracken fern, Pteridium aquilinum

(2013) Joshua P Der et al.   BMC GENOMICS

Analysis of the WUSCHEL-RELATED HOMEOBOX gene family in the conifer picea abies reveals extensive conservation as well as dynamic patterns

(2013) Harald Hedman et al.   BMC PLANT BIOLOGY

Spatial Coordination between Stem Cell Activity and Cell Differentiation in the Root Meristem

(2013) Laila Moubayidin et al.   DEVELOPMENTAL CELL

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Is There a Metabolic Requirement for Photorespiratory Enzyme Activities in Heterotrophic Tissues?

(2013) Adriano Nunes-Nesi et al.   Molecular Plant

The Norway spruce genome sequence and conifer genome evolution

(2013) Björn Nystedt et al.   NATURE

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

(2013) Brian J Haas et al.   Nature Protocols

Conserved transport mechanisms but distinct auxin responses govern shoot patterning inSelaginella kraussiana

(2013) Heather L. Sanders et al.   NEW PHYTOLOGIST

The Moss Physcomitrella patens Reproductive Organ Development Is Highly Organized, Affected by the Two SHI/STY Genes and by the Level of Active Auxin in the SHI/STY Expression Domain

(2013) K. Landberg et al.   PLANT PHYSIOLOGY

The Amborella Genome and the Evolution of Flowering Plants

(2013) et al.   SCIENCE

RNA-seq analysis identifies potential modulators of gravity response in spores of Ceratopteris (Parkeriaceae): Evidence for modulation by calcium pumps and apyrase activity

(2012) Thomas J. Bushart et al.   AMERICAN JOURNAL OF BOTANY

The evolution of root hairs and rhizoids

(2012) Victor A.S. Jones et al.   ANNALS OF BOTANY

Control ofArabidopsisRoot Development

(2012) Jalean J. Petricka et al.   Annual Review of Plant Biology

Transcript profiling of cytokinin action in Arabidopsis roots and shoots discovers largely similar but also organ-specific responses

(2012) Wolfram G Brenner et al.   BMC PLANT BIOLOGY

A PHABULOSA/Cytokinin Feedback Loop Controls Root Growth in Arabidopsis

(2012) Raffaele Dello Ioio et al.   CURRENT BIOLOGY

Morphological evolution in land plants: new designs with old genes

(2012) N. D. Pires et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Auxin ControlsArabidopsisAdventitious Root Initiation by Regulating Jasmonic Acid Homeostasis

(2012) Laurent Gutierrez et al.   PLANT CELL

Auxin, cytokinin and the control of shoot branching

(2011) Dörte Müller et al.   ANNALS OF BOTANY

Origin of land plants: Do conjugating green algae hold the key?

(2011) Sabina Wodniok et al.   BMC EVOLUTIONARY BIOLOGY

A Mutually Inhibitory Interaction between Auxin and Cytokinin Specifies Vascular Pattern in Roots

(2011) Anthony Bishopp et al.   CURRENT BIOLOGY

Secondary cell wall patterning during xylem differentiation

(2011) Yoshihisa Oda et al.   CURRENT OPINION IN PLANT BIOLOGY

Growth and development of the root apical meristem

(2011) Serena Perilli et al.   CURRENT OPINION IN PLANT BIOLOGY

ABC transporters coordinately expressed during lignification of Arabidopsis stems include a set of ABCBs associated with auxin transport

(2011) M. Kaneda et al.   JOURNAL OF EXPERIMENTAL BOTANY

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genome sequence and analysis of the tuber crop potato

(2011) Xun Xu et al.   NATURE

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools

(2011) Philippe Lamesch et al.   NUCLEIC ACIDS RESEARCH

NCBI Reference Sequences (RefSeq): current status, new features and genome annotation policy

(2011) K. D. Pruitt et al.   NUCLEIC ACIDS RESEARCH

The invention of WUS-like stem cell-promoting functions in plants predates leptosporangiate ferns

(2011) Judith Nardmann et al.   PLANT MOLECULAR BIOLOGY

The Selaginella Genome Identifies Genetic Changes Associated with the Evolution of Vascular Plants

(2011) J. A. Banks et al.   SCIENCE

Uncovering the evolutionary origin of plant molecular processes: comparison of Coleochaete (Coleochaetales) and Spirogyra (Zygnematales) transcriptomes

(2010) Ruth E Timme et al.   BMC PLANT BIOLOGY

The Rate of Cell Differentiation Controls the Arabidopsis Root Meristem Growth Phase

(2010) Laila Moubayidin et al.   CURRENT BIOLOGY

Evolutionary crossroads in developmental biology: Physcomitrella patens

(2010) M. J. Prigge et al.   DEVELOPMENT

MONOPTEROS controls embryonic root initiation by regulating a mobile transcription factor

(2010) Alexandra Schlereth et al.   NATURE

Genome sequencing and analysis of the model grass Brachypodium distachyon

(2010) John P. Vogel et al.   NATURE

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists

(2009) Eran Eden et al.   BMC BIOINFORMATICS

Plant primary meristems: shared functions and regulatory mechanisms

(2009) Yvonne Stahl et al.   CURRENT OPINION IN PLANT BIOLOGY

Auxin transport routes in plant development

(2009) J. Petrasek et al.   DEVELOPMENT

Phenotypic Plasticity of Adventitious Rooting in Arabidopsis Is Controlled by Complex Regulation of AUXIN RESPONSE FACTOR Transcripts and MicroRNA Abundance

(2009) L. Gutierrez et al.   PLANT CELL

Cytokinin regulates root meristem activity via modulation of the polar auxin transport

(2009) K. Ruzicka et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The B73 Maize Genome: Complexity, Diversity, and Dynamics

(2009) P. S. Schnable et al.   SCIENCE

The Earliest Land Plants

(2008) Patricia G. Gensel   Annual Review of Ecology Evolution and Systematics

BREVIS RADIX is involved in cytokinin-mediated inhibition of lateral root initiation in Arabidopsis

(2008) Jing Li et al.   PLANTA

A Genetic Framework for the Control of Cell Division and Differentiation in the Root Meristem

(2008) R. D. Ioio et al.   SCIENCE

Three Type-B Response Regulators, ARR1, ARR10 and ARR12, Play Essential but Redundant Roles in Cytokinin Signal Transduction Throughout the Life Cycle of Arabidopsis thaliana

(2007) Kai Ishida et al.   PLANT AND CELL PHYSIOLOGY