Article
Neurosciences
Alexandra A. Sandberg, Evan Manning, Heather M. Wilkins, Randall Mazzarino, Taylor Minckley, Russell H. Swerdlow, David Patterson, Yan Qin, Daniel A. Linseman
Summary: In this study, the potential of mitochondrial-targeted AICD to induce neuronal apoptosis and its mechanism of neurotoxicity were examined. The results showed that only when AICD was targeted to the mitochondria, significant neuronal apoptosis was induced. Furthermore, AICD induced apoptosis via a mechanism that is distinct from that of A beta.
JOURNAL OF ALZHEIMERS DISEASE
(2022)
Article
Neurosciences
Filomena Iannuzzi, Vincenza Frisardi, Lucio Annunziato, Carmela Matrone
Summary: Alzheimer's disease is a devastating neurodegenerative disorder without a cure, and the challenge lies in identifying specific biomarkers for each patient before neurodegenerative processes begin. This study found that excessive phosphorylation of the APP Tyr(682) residue precedes amyloid beta accumulation and neuronal degeneration in AD neurons. It suggests using fibroblasts as a tool to assess APP Tyr(682) phosphorylation as a potential diagnostic strategy.
Article
Cell Biology
Haylee Mesa, Elaine Y. Y. Zhang, Yingcai Wang, Qi Zhang
Summary: In this study, APP-null iPSCs were generated using CRISPR/Cas9 genome editing technology and differentiated into matured human neurons with functional synapses. During hiN differentiation and maturation, APP-null cells showed reduced neurite growth and synaptogenesis in serum-free media. The developmental defects were rescued by cholesterol and coculture with wild-type mouse astrocytes. Patch-clamp recordings and live-cell imaging revealed that APP-null cells exhibited reduced synaptic transmission due to decreased synaptic vesicle release and retrieval, and this deficit was mitigated by adding cholesterol before stimulation. This study suggests that APP contributes to neurodevelopment, synaptogenesis, and neurotransmission by maintaining brain cholesterol homeostasis.
JOURNAL OF CELLULAR PHYSIOLOGY
(2023)
Review
Pharmacology & Pharmacy
Yoonsuk Cho, Han-Gyu Bae, Eitan Okun, Thiruma V. Arumugam, Dong-Gyu Jo
Summary: APP is an evolutionarily conserved transmembrane protein that serves as a precursor to amyloid-beta peptides, which are implicated in Alzheimer's disease. Studies have shown diverse pathological and physiological functions of APP and its cleavage products, but their roles are not fully understood. Current research focuses on APP processing and potential therapeutic approaches for Alzheimer's disease.
PHARMACOLOGY & THERAPEUTICS
(2022)
Article
Chemistry, Multidisciplinary
Ushasi Pramanik, Atanu Nandy, Laxmikanta Khamari, Saptarshi Mukherjee
Summary: Intrinsically disordered proteins (IDPs) possess unique dynamic characteristics that are difficult to study using traditional methods. Single-molecule measurements provide a better understanding of the conformational transitions of IDPs. These approaches are important for revealing the structural transitions of IDPs and future research directions.
Article
Biochemistry & Molecular Biology
Sebas D. Pronk, Erik Schooten, Jurgen Heinen, Esra Helfrich, Sabrina Oliveira, Paul M. P. van Bergen En Henegouwen
Summary: Antibody-drug conjugates (ADCs) are currently used for targeted drug delivery, but the large size and slow internalization of antibodies may limit their efficacy. By developing internalizing single domain antibodies (sdAbs) through phage display method, it is shown that sdAbs with high internalization rates have improved cytotoxicity when conjugated with cytotoxic drugs, indicating the importance of lysosomal trafficking for efficient drug release.
Article
Chemistry, Multidisciplinary
Esha Pandit, Lopamudra Das, Anoy Kumar Das, Sandip Dolui, Saumen Saha, Uttam Pal, Animesh Mondal, Joydeep Chowdhury, Subhas C. C. Biswas, Nakul C. C. Maiti
Summary: Parkinson's disease is an age-related neurological disorder caused by aggregates of alpha-synuclein (aS) proteins. In this study, the structure and aggregation behavior of two artificial single point mutants of aS were analyzed and compared to the wild-type. The mutants showed enhanced structural stability and alpha-helical propensity, resulting in slower fibril formation and reduced toxicity to neuronal cells.
FRONTIERS IN CHEMISTRY
(2023)
Article
Multidisciplinary Sciences
Hannah K. D'Ambrosio, Jack G. Ganley, Aaron M. Keeler, Emily R. Derbyshire
Summary: We reveal the sequences of three acyltransferase domains from a polyketide synthase in Toxoplasma gondii and find them distinct from domains in well-characterized microbial biosynthetic gene clusters. Biochemical investigations show that two domains, AT1 and AT2, hydrolyze malonyl-CoA while the terminal domain, AT3, is non-functional. Furthermore, we identify an on-off switch residue that controls activity, with a single amino acid change in AT3 conferring hydrolysis activity and the analogous mutation in AT2 eliminating activity. This study lays the foundation for further molecular and structural studies on polyketide synthases from T. gondii and other protists.
Article
Biochemistry & Molecular Biology
Dogus Murat Altintas, Simona Gallo, Cristina Basilico, Marina Cerqua, Alessio Bocedi, Annapia Vitacolonna, Orsola Botti, Elena Casanova, Ilaria Rancati, Chiara Milanese, Sara Notari, Giorgia Gambardella, Giorgio Ricci, Pier Giorgio Mastroberardino, Carla Boccaccio, Tiziana Crepaldi, Paolo Maria Comoglio
Summary: The PSI domain of the MET receptor regulates its disulfide isomerase activity and is essential for the cleavage, maturation, and biological functions of the MET protein.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2022)
Article
Geriatrics & Gerontology
Jacob W. Astroski, Leonora K. Akporyoe, Elliot J. Androphy, Sara K. Custer
Summary: Understanding the genetics of families with histories of AD is crucial in understanding the cellular processes involved in Alzheimer's disease. Mutations in the COPI complex have been found in these families, and recent studies suggest that components of the COPI complex can affect the metabolism of pathogenic AD proteins. Depletion of the COPI subunit a-COP has been shown to alter the processing of both APP and Tau, potentially leading to pathogenic changes associated with AD.
NEUROBIOLOGY OF AGING
(2021)
Article
Biochemistry & Molecular Biology
Chalatip Chompunud Na Ayudhya, Aetas Amponnawarat, Hydar Ali
Summary: The neuropeptide substance P activates mast cells through MrgprB2, contributing to neurogenic inflammation and pain in atopic dermatitis. Certain MRGPRX2 agonists lead to beta-arrestin recruitment, revealing a new pathway for receptor internalization and desensitization. The study highlights a tyrosine residue in the highly conserved NPxxY motif of MRGPRX2 that plays a role in both G protein- and beta-arrestin-mediated responses.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2021)
Article
Biochemistry & Molecular Biology
Ruth Maron, Yaron Vinik, Michael Tsoory, Meir Wilchek, Ruth Arnon
Summary: This study finds that the major proteins involved in Alzheimer's disease are amyloid precursor protein (APP) and Tau. It demonstrates that connecting the peptides APP1 (390-412) and Tau1 (19-34) with either a flexible or a rigid peptide bridge can inhibit the interaction between APP and Tau proteins in vitro. Moreover, in vivo studies in transgenic mice show that nasal administration of the flexible linked peptide reduces amyloid plaque burden and prevents cognitive deterioration.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2023)
Article
Multidisciplinary Sciences
Yang Wang, Wenjie Yuan, Siqi Guo, Qiqi Li, Xiaomei Chen, Cheng Li, Qianying Liu, Lei Sun, Zhenguo Chen, Zhenghong Yuan, Cheng Luo, Shijie Chen, Shuping Tong, Michael Nassal, Yu-Mei Wen, Yong-Xiang Wang
Summary: Researchers have discovered a 33-residue peptide that can improve the solubility and stability of multiple scFvs produced in Escherichia coli. This peptide tag, called P17, increases the solubility of scFvs up to 11.6 fold and enhances their thermostability. Additionally, scFvs with the P17 tag show higher antigen-binding affinity and virus-neutralizing activity. These findings have important implications for the research, production, and application of scFv.
NATURE COMMUNICATIONS
(2022)
Article
Biochemistry & Molecular Biology
Waka Sato, Miho Watanabe-Takahashi, Takashi Hamabata, Koichi Furukawa, Satoru Funamoto, Kiyotaka Nishikawa
Summary: Accumulation of amyloid-13 peptide in neuronal cells and in the extracellular regions in the brain is a major cause of Alzheimer's disease. Inhibiting A13 accumulation provides a promising therapeutic strategy against AD by modulating the intracellular transport of APP.
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
(2021)
Article
Multidisciplinary Sciences
Wenhao Fu, Huanyu Chi, Xin Dai, Hongni Zhu, Vince St. Dollente Mesias, Wei Liu, Jinqing Huang
Summary: This study utilizes optical plasmonic trapping to construct a dynamic nanocavity for high-throughput single-molecule surface-enhanced Raman spectroscopy (SERS) characterizations in aqueous environments. The results provide mechanistic insight into pH-regulated amyloidogenesis and introduce a new approach for investigating complex biological processes at the single-molecule level.
NATURE COMMUNICATIONS
(2023)
Article
Multidisciplinary Sciences
Marc D. Tambini, Luciano D'Adamio
SCIENTIFIC REPORTS
(2020)
Article
Biology
Marc D. Tambini, Kelly A. Norris, Luciano D'Adamio
Article
Oncology
Zilai Wang, Daochun Sun, Yu-Jung Chen, Xuanhua Xie, Yufeng Shi, Viviane Tabar, Cameron W. Brennan, Tejus A. Bale, Chenura D. Jayewickreme, Dan R. Laks, Sheila Alcantara Llaguno, Luis F. Parada
Article
Medicine, Research & Experimental
Daniela Puzzo, Elentina K. Argyrousi, Agnieszka Staniszewski, Hong Zhang, Elisa Calcagno, Elisa Zuccarello, Erica Acquarone, Mauro Fa', Domenica D. Li Puma, Claudio Grassi, Luciano D'Adamio, Nicholas M. Kanaan, Paul E. Fraser, Ottavio Arancio
JOURNAL OF CLINICAL INVESTIGATION
(2020)
Article
Biology
Siqiang Ren, Wen Yao, Marc D. Tambini, Tao Yin, Kelly A. Norris, Luciano D'Adamio
Review
Health Care Sciences & Services
Cristina D'Abramo, Luciano D'Adamio, Luca Giliberto
JOURNAL OF PERSONALIZED MEDICINE
(2020)
Article
Multidisciplinary Sciences
Xuanhua P. Xie, Dan R. Laks, Daochun Sun, Asaf Poran, Ashley M. Laughney, Zilai Wang, Jessica Sam, German Belenguer, Isabel Farinas, Olivier Elemento, Xiuping Zhou, Luis F. Parada
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
(2020)
Article
Cell & Tissue Engineering
Daochun Sun, Xuanhua P. Xie, Xiyuan Zhang, Zilai Wang, Sameer Farouk Sait, Swathi Iyer, Yu-Jung Chen, Rebecca Brown, Dan R. Laks, Mollie E. Chipman, Jack F. Shern, Luis F. Parada
Summary: NF1-associated MPNSTs originate from benign peripheral nerve neurofibromas and a rare stem-cell-like cell population within MPNSTs plays a crucial role in tumor initiation and relapse. By isolating and characterizing these cells, a cancer stem cell-specific gene expression signature has been identified, with potential therapeutic implications. Targeting cancer stem cells in combination with antimitotic chemotherapy shows promise in inhibiting tumor growth and prolonging survival, with implications for MPNST therapy development.
Article
Biochemistry & Molecular Biology
Tao Yin, Wen Yao, Kelly A. Norris, Luciano D'Adamio
Summary: The study of rats carrying the Danish mutation in the Itm2b gene revealed early pathogenic changes related to neuronal communication and synaptic transmission. These alterations may impair learning and memory processes, resembling the observations in mice carrying other related gene mutations.
JOURNAL OF BIOLOGICAL CHEMISTRY
(2021)
Review
Oncology
Zilai Wang, Norton P. Peet, Pin Zhang, Yuwei Jiang, Lijun Rong
Summary: GBM is the most common and aggressive malignant primary brain tumor in humans, with limited success in treatment. Identifying and understanding key molecules and barriers for treatment resistance is crucial for discovering new potential therapeutic targets.
MOLECULAR CANCER THERAPEUTICS
(2021)
Article
Cell Biology
Xuanhua P. Xie, Dan R. Laks, Daochun Sun, Mungunsarnai Ganbold, Zilai Wang, Alicia M. Pedraza, Tejus Bale, Viviane Tabar, Cameron Brennan, Xiuping Zhou, Luis F. Parada
Summary: This study confirms the existence of quiescent cancer stem cells in glioblastoma that can evade anti-proliferative therapies. By analyzing the functional characteristics of glioblastomas from genetically engineered mice, essential quiescent stem-like cells that can be directly isolated from tumors were identified. A specific gene expression signature related to quiescent cancer stem cells was found in both primary and recurrent human glioblastomas. These findings provide insights into the failure of conventional treatment and lay the foundation for alternative therapies.
DEVELOPMENTAL CELL
(2022)
Article
Multidisciplinary Sciences
Mollie E. Chipman, Zilai Wang, Daochun Sun, Alicia M. Pedraza, Tejus A. Bale, Luis F. Parada
Summary: By using genetically engineered mouse models and orthotopic transplantation-based GBM models, this study explores the influence of tumor cell lineage on the immune microenvironment and response to tumor-associated macrophage (TAM) depletion therapy. Results show that oligodendrocyte progenitor cell lineage-associated GBMs recruit more immune infiltrates compared to subventricular zone neural stem cell-associated GBMs. A TAM depletion system is devised, but extensive TAM depletion does not confer any survival benefit in these cell lineage-based GBM models. However, Type 1 and Type 2 GBMs exhibit unique molecular responses to TAM depletion.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
(2023)
Article
Multidisciplinary Sciences
Ruifan Wu, Jooman Park, Yanyu Qian, Zuoxiao Shi, Ruoci Hu, Yexian Yuan, Shaolei Xiong, Zilai Wang, Gege Yan, Sang-Ging Ong, Qing Song, Zhenyuan Song, Abeer M. Mahmoud, Pingwen Xu, Congcong He, Robert W. Arpke, Michael Kyba, Gang Shu, Qingyan Jiang, Yuwei Jiang
Summary: Inhibiting Cdkn2a-Becn1 mediated autophagy can maintain beige adipocytes and provide long term metabolic health benefits in mice.
NATURE COMMUNICATIONS
(2023)
Editorial Material
Medicine, Research & Experimental
Luciano D'Adamio
EMBO MOLECULAR MEDICINE
(2023)
Article
Biochemistry & Molecular Biology
Tao Yin, Wen Yao, Alexander D. Lemenze, Luciano D'Adamio
Summary: Mutations in the ITM2b gene associated with FDD and FBD lead to a reduction in BRI2 levels and function at synapses, resulting in decreased glutamatergic transmission. These mutations also impact the maturation of BRI2, leading to lower levels of functional mature BRI2 protein at synapses.
JOURNAL OF BIOLOGICAL CHEMISTRY
(2021)