When the forest dies: the response of forest soil fungi to a bark beetle-induced tree dieback

Analysis of soil fungal communities by amplicon pyrosequencing: current approaches to data analysis and the introduction of the pipeline SEED

(2013) Tomáš Větrovský et al.   BIOLOGY AND FERTILITY OF SOILS

Persistent reduced ecosystem respiration after insect disturbance in high elevation forests

(2013) David J. P. Moore et al.   ECOLOGY LETTERS

Seasonal dynamics of fungal communities in a temperate oak forest soil

(2013) Jana Voříšková et al.   NEW PHYTOLOGIST

The production and turnover of extramatrical mycelium of ectomycorrhizal fungi in forest soils: role in carbon cycling

(2013) A. Ekblad et al.   PLANT AND SOIL

Roots and Associated Fungi Drive Long-Term Carbon Sequestration in Boreal Forest

(2013) K. E. Clemmensen et al.   SCIENCE

Response of soil chemistry to forest dieback after bark beetle infestation

(2012) Jiří Kaňa et al.   BIOGEOCHEMISTRY

Cellulose utilization in forest litter and soil: identification of bacterial and fungal decomposers

(2012) Martina Štursová et al.   FEMS MICROBIOLOGY ECOLOGY

Estimation of fungal biomass in forest litter and soil

(2012) Petr Baldrian et al.   Fungal Ecology

Significant and persistent impact of timber harvesting on soil microbial communities in Northern coniferous forests

(2012) Martin Hartmann et al.   ISME Journal

Neighboring Deschampsia flexuosa and Trientalis europaea harbor contrasting root fungal endophytic communities

(2012) Mysore V. Tejesvi et al.   MYCORRHIZA

Defining the core Arabidopsis thaliana root microbiome

(2012) Derek S. Lundberg et al.   NATURE

Fine-root turnover rates of European forests revisited: an analysis of data from sequential coring and ingrowth cores

(2012) I. Brunner et al.   PLANT AND SOIL

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Host species and strain combination determine growth reduction of spruce and birch seedlings colonized by root-associated dark septate endophytes

(2011) Vanessa Reininger et al.   ENVIRONMENTAL MICROBIOLOGY

Negative effects on survival and performance of Norway spruce seedlings colonized by dark septate root endophytes are primarily isolate-dependent

(2011) Christoph Tellenbach et al.   ENVIRONMENTAL MICROBIOLOGY

Saprotrophic basidiomycete mycelia and their interspecific interactions affect the spatial distribution of extracellular enzymes in soil

(2011) Jaroslav Šnajdr et al.   FEMS MICROBIOLOGY ECOLOGY

Natural regeneration in Central-European subalpine spruce forests: Which logs are suitable for seedling recruitment?

(2011) Radek Bače et al.   FOREST ECOLOGY AND MANAGEMENT

Enzyme activities of fungi associated with Picea abies needles

(2011) Lucia Žifčáková et al.   Fungal Ecology

Unraveling the drivers of intensifying forest disturbance regimes in Europe

(2011) RUPERT SEIDL et al.   GLOBAL CHANGE BIOLOGY

Effects of biotic disturbances on forest carbon cycling in the United States and Canada

(2011) Jeffrey A. Hicke et al.   GLOBAL CHANGE BIOLOGY

Active and total microbial communities in forest soil are largely different and highly stratified during decomposition

(2011) Petr Baldrian et al.   ISME Journal

Disturbance history of an old-growth sub-alpine Picea abies stand in the Bohemian Forest, Czech Republic

(2011) Miroslav Svoboda et al.   JOURNAL OF VEGETATION SCIENCE

Distinctive fungal and bacterial communities are associated with mats formed by ectomycorrhizal fungi

(2011) Laurel A. Kluber et al.   SOIL BIOLOGY & BIOCHEMISTRY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Transformation of Quercus petraea litter: successive changes in litter chemistry are reflected in differential enzyme activity and changes in the microbial community composition

(2010) Jaroslav Šnajdr et al.   FEMS MICROBIOLOGY ECOLOGY

Rapidly denoising pyrosequencing amplicon reads by exploiting rank-abundance distributions

(2010) Jens Reeder et al.   NATURE METHODS

Production of ectomycorrhizal mycelium peaks during canopy closure in Norway spruce forests

(2010) Håkan Wallander et al.   NEW PHYTOLOGIST

454 Pyrosequencing and Sanger sequencing of tropical mycorrhizal fungi provide similar results but reveal substantial methodological biases

(2010) Leho Tedersoo et al.   NEW PHYTOLOGIST

Effects of soil properties and management on the activity of soil organic matter transforming enzymes and the quantification of soil-bound and free activity

(2010) Martina Štursová et al.   PLANT AND SOIL

Effect of available P and phenolics on mineral N release in acidified spruce forest: connection with lignin-degrading enzymes and bacterial and fungal communities

(2009) Jiří Bárta et al.   BIOGEOCHEMISTRY

Termination of belowground C allocation by trees alters soil fungal and bacterial communities in a boreal forest

(2009) Stephanie A. Yarwood et al.   FEMS MICROBIOLOGY ECOLOGY

ClassII peroxidase-encoding genes are present in a phylogenetically wide range of ectomycorrhizal fungi

(2009) Inga T M Bödeker et al.   ISME Journal

Urgent preservation of boreal carbon stocks and biodiversity

(2009) Corey J.A. Bradshaw et al.   TRENDS IN ECOLOGY & EVOLUTION

Innovative Methods for Soil DNA Purification Tested in Soils with Widely Differing Characteristics

(2008) M. Sagova-Mareckova et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The influence of bark beetles outbreak vs. salvage logging on ground layer vegetation in Central European mountain spruce forests

(2008) Magda Jonášová et al.   BIOLOGICAL CONSERVATION

Tree die-off in response to global change-type drought: mortality insights from a decade of plant water potential measurements

(2008) David D Breshears et al.   FRONTIERS IN ECOLOGY AND THE ENVIRONMENT

Mountain pine beetle and forest carbon feedback to climate change

(2008) W. A. Kurz et al.   NATURE

Tree girdling increases soil N mineralisation in two spruce stands

(2008) Bernd Zeller et al.   SOIL BIOLOGY & BIOCHEMISTRY

Spatial variability of enzyme activities and microbial biomass in the upper layers of Quercus petraea forest soil

(2008) Jaroslav Šnajdr et al.   SOIL BIOLOGY & BIOCHEMISTRY

Introduction. The boreal forest and global change

(2007) K.E Ruckstuhl et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES