The red coral (Corallium rubrum ) transcriptome: a new resource for population genetics and local adaptation studies
出版年份 2015 全文链接
标题
The red coral (Corallium rubrum
) transcriptome: a new resource for population genetics and local adaptation studies
作者
关键词
-
出版物
Molecular Ecology Resources
Volume 15, Issue 5, Pages 1205-1215
出版商
Wiley
发表日期
2015-02-04
DOI
10.1111/1755-0998.12383
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- (2014) Vaihiti Teaniniuraitemoana et al. BMC GENOMICS
- Production of a reference transcriptome and transcriptomic database (EdwardsiellaBase) for the lined sea anemone, Edwardsiella lineata, a parasitic cnidarian
- (2014) Derek J Stefanik et al. BMC GENOMICS
- Observing mixed layer depth, nitrate and chlorophyll concentrations in the northwestern Mediterranean: A combined satellite and NO3 profiling floats experiment
- (2014) Fabrizio D'Ortenzio et al. GEOPHYSICAL RESEARCH LETTERS
- Comparative population genomics in animals uncovers the determinants of genetic diversity
- (2014) J. Romiguier et al. NATURE
- Transcriptome Analysis of the Scleractinian Coral Stylophora pistillata
- (2014) Sarit Karako-Lampert et al. PLoS One
- Mechanisms of reef coral resistance to future climate change
- (2014) S. R. Palumbi et al. SCIENCE
- Translational environmental biology: cell biology informing conservation
- (2014) Nikki Traylor-Knowles et al. TRENDS IN CELL BIOLOGY
- Cnidarian phylogenetic relationships as revealed by mitogenomics
- (2013) Ehsan Kayal et al. BMC EVOLUTIONARY BIOLOGY
- Genotype – environment correlations in corals from the Great Barrier Reef
- (2013) Petra Lundgren et al. BMC GENETICS
- Adaptive abilities of the Mediterranean red coral Corallium rubrum in a heterogeneous and changing environment: from population to functional genetics
- (2013) A. Haguenauer et al. JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY
- Diagnostic gene expression biomarkers of coral thermal stress
- (2013) C. D. Kenkel et al. Molecular Ecology Resources
- Genes Related to Ion-Transport and Energy Production Are Upregulated in Response to CO2-Driven pH Decrease in Corals: New Insights from Transcriptome Analysis
- (2013) Jeremie Vidal-Dupiol et al. PLoS One
- Gene Expression Signatures of Energetic Acclimatisation in the Reef Building Coral Acropora millepora
- (2013) Line K. Bay et al. PLoS One
- Genomic basis for coral resilience to climate change
- (2013) Daniel J. Barshis et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Immune response of the Caribbean sea fan, Gorgonia ventalina, exposed to an Aplanochytrium parasite as revealed by transcriptome sequencing
- (2013) Colleen A. Burge et al. Frontiers in Physiology
- Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels
- (2012) Marcel H. Schulz et al. BIOINFORMATICS
- DIFFERENCES IN THE REGULATION OF GROWTH AND BIOMINERALIZATION GENES REVEALED THROUGH LONG-TERM COMMON-GARDEN ACCLIMATION AND EXPERIMENTAL GENOMICS IN THE PURPLE SEA URCHIN
- (2012) Melissa H. Pespeni et al. EVOLUTION
- Cell Biology of Cnidarian-Dinoflagellate Symbiosis
- (2012) S. K. Davy et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- Whole Transcriptome Analysis of the CoralAcropora milleporaReveals Complex Responses to CO2-driven Acidification during the Initiation of Calcification
- (2012) A. MOYA et al. MOLECULAR ECOLOGY
- Transcriptome-wide polymorphisms of red abalone (Haliotis rufescens) reveal patterns of gene flow and local adaptation
- (2012) Pierre De Wit et al. MOLECULAR ECOLOGY
- Low connectivity and declining genetic variability along a depth gradient in Corallium rubrum populations
- (2011) F. Costantini et al. CORAL REEFS
- Differential expression in RNA-seq: A matter of depth
- (2011) S. Tarazona et al. GENOME RESEARCH
- Estimation of divergence times in cnidarian evolution based on mitochondrial protein-coding genes and the fossil record
- (2011) Eunji Park et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- A framework for variation discovery and genotyping using next-generation DNA sequencing data
- (2011) Mark A DePristo et al. NATURE GENETICS
- Gene Discovery in the Threatened Elkhorn Coral: 454 Sequencing of the Acropora palmata Transcriptome
- (2011) Nicholas R. Polato et al. PLoS One
- The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
- (2010) A. McKenna et al. GENOME RESEARCH
- Fine-scale genetic structure and inferences on population biology in the threatened Mediterranean red coral, Corallium rubrum
- (2010) J.-B. LEDOUX et al. MOLECULAR ECOLOGY
- Genetic survey of shallow populations of the Mediterranean red coral [Corallium rubrum(Linnaeus, 1758)]: new insights into evolutionary processes shaping nuclear diversity and implications for conservation
- (2010) J.-B. LEDOUX et al. MOLECULAR ECOLOGY
- A scaling normalization method for differential expression analysis of RNA-seq data
- (2010) Mark D Robinson et al. GENOME BIOLOGY
- Differential expression analysis for sequence count data
- (2010) Simon Anders et al. GENOME BIOLOGY
- ABINs: A20 binding inhibitors of NF-κB and apoptosis signaling
- (2009) Lynn Verstrepen et al. BIOCHEMICAL PHARMACOLOGY
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
- (2009) M. D. Robinson et al. BIOINFORMATICS
- Sequencing and de novo analysis of a coral larval transcriptome using 454 GSFlx
- (2009) Eli Meyer et al. BMC GENOMICS
- Transcriptomic responses to heat stress and bleaching in the elkhorn coral Acropora palmata
- (2009) MK DeSalvo et al. MARINE ECOLOGY PROGRESS SERIES
- An ancient and variable mannose-binding lectin from the coral Acropora millepora binds both pathogens and symbionts
- (2008) E. Charlotte E. Kvennefors et al. DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY
- Upper thermal thresholds of shallow vs. deep populations of the precious Mediterranean red coral Corallium rubrum (L.): Assessing the potential effects of warming in the NW Mediterranean
- (2008) O. Torrents et al. JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY
- Mapping and quantifying mammalian transcriptomes by RNA-Seq
- (2008) Ali Mortazavi et al. NATURE METHODS
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