iRSpot-TNCPseAAC: Identify Recombination Spots with Trinucleotide Composition and Pseudo Amino Acid Components
出版年份 2014 全文链接
标题
iRSpot-TNCPseAAC: Identify Recombination Spots with Trinucleotide Composition and Pseudo Amino Acid Components
作者
关键词
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出版物
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
Volume 15, Issue 2, Pages 1746-1766
出版商
MDPI AG
发表日期
2014-01-25
DOI
10.3390/ijms15021746
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- iHSP-PseRAAAC: Identifying the heat shock protein families using pseudo reduced amino acid alphabet composition
- (2013) Peng-Mian Feng et al. ANALYTICAL BIOCHEMISTRY
- iAMP-2L: A two-level multi-label classifier for identifying antimicrobial peptides and their functional types
- (2013) Xuan Xiao et al. ANALYTICAL BIOCHEMISTRY
- Combining evolutionary information extracted from frequency profiles with sequence-based kernels for protein remote homology detection
- (2013) Bin Liu et al. BIOINFORMATICS
- propy: a tool to generate various modes of Chou’s PseAAC
- (2013) Dong-Sheng Cao et al. BIOINFORMATICS
- Using radial basis function on the general form of Chou's pseudo amino acid composition and PSSM to predict subcellular locations of proteins with both single and multiple sites
- (2013) Chao Huang et al. BIOSYSTEMS
- Meiotic and Mitotic Recombination in Meiosis
- (2013) K. P. Kohl et al. GENETICS
- EuLoc: a web-server for accurately predict protein subcellular localization in eukaryotes by incorporating various features of sequence segments into the general form of Chou’s PseAAC
- (2013) Tzu-Hao Chang et al. JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN
- A Multilabel Model Based on Chou’s Pseudo–Amino Acid Composition for Identifying Membrane Proteins with Both Single and Multiple Functional Types
- (2013) Chao Huang et al. JOURNAL OF MEMBRANE BIOLOGY
- Discriminating bioluminescent proteins by incorporating average chemical shift and evolutionary information into the general form of Chou's pseudo amino acid composition
- (2013) Guo-Liang Fan et al. JOURNAL OF THEORETICAL BIOLOGY
- Predicting protein subchloroplast locations with both single and multiple sites via three different modes of Chou's pseudo amino acid compositions
- (2013) Chao Huang et al. JOURNAL OF THEORETICAL BIOLOGY
- GOASVM: A subcellular location predictor by incorporating term-frequency gene ontology into the general form of Chou's pseudo-amino acid composition
- (2013) Shibiao Wan et al. JOURNAL OF THEORETICAL BIOLOGY
- iCDI-PseFpt: Identify the channel–drug interaction in cellular networking with PseAAC and molecular fingerprints
- (2013) Xuan Xiao et al. JOURNAL OF THEORETICAL BIOLOGY
- Predicting anticancer peptides with Chou′s pseudo amino acid composition and investigating their mutagenicity via Ames test
- (2013) Zohre Hajisharifi et al. JOURNAL OF THEORETICAL BIOLOGY
- iLoc-Animal: a multi-label learning classifier for predicting subcellular localization of animal proteins
- (2013) Wei-Zhong Lin et al. Molecular BioSystems
- Some remarks on predicting multi-label attributes in molecular biosystems
- (2013) Kuo-Chen Chou Molecular BioSystems
- Protein Remote Homology Detection by Combining Chou’s Pseudo Amino Acid Composition and Profile-Based Protein Representation
- (2013) Bin Liu et al. Molecular Informatics
- iRSpot-PseDNC: identify recombination spots with pseudo dinucleotide composition
- (2013) Wei Chen et al. NUCLEIC ACIDS RESEARCH
- iSNO-PseAAC: Predict Cysteine S-Nitrosylation Sites in Proteins by Incorporating Position Specific Amino Acid Propensity into Pseudo Amino Acid Composition
- (2013) Yan Xu et al. PLoS One
- iGPCR-Drug: A Web Server for Predicting Interaction between GPCRs and Drugs in Cellular Networking
- (2013) Xuan Xiao et al. PLoS One
- Predicting Antibacterial Peptides by the Concept of Chou's Pseudo-amino Acid Composition and Machine Learning Methods
- (2013) Maede Khosravian et al. PROTEIN AND PEPTIDE LETTERS
- Using ensemble SVM to identify human GPCRs N-linked glycosylation sites based on the general form of Chou's PseAAC
- (2013) H.-L. Xie et al. PROTEIN ENGINEERING DESIGN & SELECTION
- PREDICTING SUBCHLOROPLAST LOCATIONS OF PROTEINS BASED ON THE GENERAL FORM OF CHOU'S PSEUDO AMINO ACID COMPOSITION: APPROACHED FROM OPTIMAL TRIPEPTIDE COMPOSITION
- (2013) HAO LIN et al. International Journal of Biomathematics
- Signal Propagation in Protein Interaction Network during Colorectal Cancer Progression
- (2013) Yang Jiang et al. Biomed Research International
- iEzy-Drug: A Web Server for Identifying the Interaction between Enzymes and Drugs in Cellular Networking
- (2013) Jian-Liang Min et al. Biomed Research International
- iSNO-AAPair: incorporating amino acid pairwise coupling into PseAAC for predicting cysteineS-nitrosylation sites in proteins
- (2013) Yan Xu et al. PeerJ
- PseAAC-Builder: A cross-platform stand-alone program for generating various special Chou’s pseudo-amino acid compositions
- (2012) Pufeng Du et al. ANALYTICAL BIOCHEMISTRY
- Predict mycobacterial proteins subcellular locations by incorporating pseudo-average chemical shift into the general form of Chou’s pseudo amino acid composition
- (2012) Guo-Liang Fan et al. JOURNAL OF THEORETICAL BIOLOGY
- Predicting plant protein subcellular multi-localization by Chou's PseAAC formulation based multi-label homolog knowledge transfer learning
- (2012) Suyu Mei JOURNAL OF THEORETICAL BIOLOGY
- Predicting membrane protein types by incorporating protein topology, domains, signal peptides, and physicochemical properties into the general form of Chou’s pseudo amino acid composition
- (2012) Yen-Kuang Chen et al. JOURNAL OF THEORETICAL BIOLOGY
- Prediction of Allergenic Proteins by Means of the Concept of Chou's Pseudo Amino Acid Composition and a Machine Learning Approach
- (2012) Hassan Mohabatkar et al. Medicinal Chemistry
- Identifying protein quaternary structural attributes by incorporating physicochemical properties into the general form of Chou's PseAAC via discrete wavelet transform
- (2012) Xing-Yu Sun et al. Molecular BioSystems
- iNR-PhysChem: A Sequence-Based Predictor for Identifying Nuclear Receptors and Their Subfamilies via Physical-Chemical Property Matrix
- (2012) Xuan Xiao et al. PLoS One
- Hepatitis C Virus Network Based Classification of Hepatocellular Cirrhosis and Carcinoma
- (2012) Tao Huang et al. PLoS One
- Identification of Colorectal Cancer Related Genes with mRMR and Shortest Path in Protein-Protein Interaction Network
- (2012) Bi-Qing Li et al. PLoS One
- Predicting Anatomical Therapeutic Chemical (ATC) Classification of Drugs by Integrating Chemical-Chemical Interactions and Similarities
- (2012) Lei Chen et al. PLoS One
- Predicting Secretory Proteins of Malaria Parasite by Incorporating Sequence Evolution Information into Pseudo Amino Acid Composition via Grey System Model
- (2012) Wei-Zhong Lin et al. PLoS One
- iNuc-PhysChem: A Sequence-Based Predictor for Identifying Nucleosomes via Physicochemical Properties
- (2012) Wei Chen et al. PLoS One
- Prediction of Apoptosis Protein Locations with Genetic Algorithms and Support Vector Machines Through a New Mode of Pseudo Amino Acid Composition
- (2012) Krishna Kumar Kandaswamy et al. PROTEIN AND PEPTIDE LETTERS
- Identifying GPCRs and their Types with Chou's Pseudo Amino Acid Composition: An Approach from Multi-scale Energy Representation and Position Specific Scoring Matrix
- (2012) Zia-ur-Rehman et al. PROTEIN AND PEPTIDE LETTERS
- iLoc-Gpos: A Multi-Layer Classifier for Predicting the Subcellular Localization of Singleplex and Multiplex Gram-Positive Bacterial Proteins
- (2012) Zhi-Cheng Wu et al. PROTEIN AND PEPTIDE LETTERS
- Discriminating Outer Membrane Proteins with Fuzzy K-Nearest Neighbor Algorithms Based on the General Form of Chou’s PseAAC
- (2012) Maqsood Hayat et al. PROTEIN AND PEPTIDE LETTERS
- LIBSVM
- (2012) Chih-Chung Chang et al. ACM Transactions on Intelligent Systems and Technology
- Predicting protein submitochondria locations by combining different descriptors into the general form of Chou’s pseudo amino acid composition
- (2011) Guo-Liang Fan et al. AMINO ACIDS
- Meiotic recombination and male infertility: from basic science to clinical reality?
- (2011) Michael C Hann et al. ASIAN JOURNAL OF ANDROLOGY
- Identifying Bacterial Virulent Proteins by Fusing a Set of Classifiers Based on Variants of Chou's Pseudo Amino Acid Composition and on Evolutionary Information
- (2011) Loris Nanni et al. IEEE-ACM Transactions on Computational Biology and Bioinformatics
- iLoc-Virus: A multi-label learning classifier for identifying the subcellular localization of virus proteins with both single and multiple sites
- (2011) Xuan Xiao et al. JOURNAL OF THEORETICAL BIOLOGY
- Prediction of GABAA receptor proteins using the concept of Chou's pseudo-amino acid composition and support vector machine
- (2011) Hassan Mohabatkar et al. JOURNAL OF THEORETICAL BIOLOGY
- Multi-kernel transfer learning based on Chou's PseAAC formulation for protein submitochondria localization
- (2011) Suyu Mei JOURNAL OF THEORETICAL BIOLOGY
- Sequence-dependent prediction of recombination hotspots in Saccharomyces cerevisiae
- (2011) Guoqing Liu et al. JOURNAL OF THEORETICAL BIOLOGY
- iLoc-Plant: a multi-label classifier for predicting the subcellular localization of plant proteins with both single and multiple sites
- (2011) Zhi-Cheng Wu et al. Molecular BioSystems
- iLoc-Hum: using the accumulation-label scale to predict subcellular locations of human proteins with both single and multiple sites
- (2011) Kuo-Chen Chou et al. Molecular BioSystems
- iLoc-Euk: A Multi-Label Classifier for Predicting the Subcellular Localization of Singleplex and Multiplex Eukaryotic Proteins
- (2011) Kuo-Chen Chou et al. PLoS One
- A Multi-Label Classifier for Predicting the Subcellular Localization of Gram-Negative Bacterial Proteins with Both Single and Multiple Sites
- (2011) Xuan Xiao et al. PLoS One
- iDNA-Prot: Identification of DNA Binding Proteins Using Random Forest with Grey Model
- (2011) Wei-Zhong Lin et al. PLoS One
- Analysis of Biological Features Associated with Meiotic Recombination Hot and Cold Spots in Saccharomyces cerevisiae
- (2011) Loren Hansen et al. PLoS One
- A novel feature representation method based on Chou's pseudo amino acid composition for protein structural class prediction
- (2010) Sitanshu Sekhar Sahu et al. COMPUTATIONAL BIOLOGY AND CHEMISTRY
- Supersecondary structure prediction using Chou's pseudo amino acid composition
- (2010) Dongsheng Zou et al. JOURNAL OF COMPUTATIONAL CHEMISTRY
- SecretP: Identifying bacterial secreted proteins by fusing new features into Chou’s pseudo-amino acid composition
- (2010) Lezheng Yu et al. JOURNAL OF THEORETICAL BIOLOGY
- Predicting ion channels and their types by the dipeptide mode of pseudo amino acid composition
- (2010) Hao Lin et al. JOURNAL OF THEORETICAL BIOLOGY
- AFP-Pred: A random forest approach for predicting antifreeze proteins from sequence-derived properties
- (2010) Krishna Kumar Kandaswamy et al. JOURNAL OF THEORETICAL BIOLOGY
- Some remarks on protein attribute prediction and pseudo amino acid composition
- (2010) Kuo-Chen Chou JOURNAL OF THEORETICAL BIOLOGY
- GPCR-2L: predicting G protein-coupled receptors and their types by hybridizing two different modes of pseudo amino acid compositions
- (2010) Xuan Xiao et al. Molecular BioSystems
- Prediction of Cyclin Proteins Using Chous Pseudo Amino Acid Composition
- (2010) Hassan Mohabatkar PROTEIN AND PEPTIDE LETTERS
- Prediction of Subcellular Localization of Apoptosis Protein Using Chou’s Pseudo Amino Acid Composition
- (2009) Hao Lin et al. ACTA BIOTHEORETICA
- Prediction of G-protein-coupled receptor classes based on the concept of Chou’s pseudo amino acid composition: An approach from discrete wavelet transform
- (2009) Jian-Ding Qiu et al. ANALYTICAL BIOCHEMISTRY
- A top-down approach to enhance the power of predicting human protein subcellular localization: Hum-mPLoc 2.0
- (2009) Hong-Bin Shen et al. ANALYTICAL BIOCHEMISTRY
- Pseudo Amino Acid Composition and its Applications in Bioinformatics, Proteomics and System Biology
- (2009) Kuo-Chen Chou Current Proteomics
- Using the augmented Chou's pseudo amino acid composition for predicting protein submitochondria locations based on auto covariance approach
- (2009) Yu-hong Zeng et al. JOURNAL OF THEORETICAL BIOLOGY
- Using the concept of Chou's pseudo amino acid composition for risk type prediction of human papillomaviruses
- (2009) Maryam Esmaeili et al. JOURNAL OF THEORETICAL BIOLOGY
- Analysis of the Meiotic Recombination GeneREC8for Sequence Variations in a Population with Severe Male Factor Infertility
- (2009) Jeanine Griffin et al. Systems Biology in Reproductive Medicine
- Using Chou’s pseudo amino acid composition to predict protein quaternary structure: a sequence-segmented PseAAC approach
- (2008) Shao-Wu Zhang et al. AMINO ACIDS
- Genetic programming for creating Chou’s pseudo amino acid based features for submitochondria localization
- (2008) Loris Nanni et al. AMINO ACIDS
- Predicting the cofactors of oxidoreductases based on amino acid composition distribution and Chou's amphiphilic pseudo-amino acid composition
- (2008) Guang-Ya Zhang et al. JOURNAL OF THEORETICAL BIOLOGY
- Predicting protein structural classes with pseudo amino acid composition: An approach using geometric moments of cellular automaton image
- (2008) Xuan Xiao et al. JOURNAL OF THEORETICAL BIOLOGY
- Use of fuzzy clustering technique and matrices to classify amino acids and its impact to Chou's pseudo amino acid composition
- (2008) D.N. Georgiou et al. JOURNAL OF THEORETICAL BIOLOGY
- PseAAC: A flexible web server for generating various kinds of protein pseudo amino acid composition
- (2007) Hong-Bin Shen et al. ANALYTICAL BIOCHEMISTRY
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