Analysis of cbbL, nifH, and pufLM in Soils from the Sør Rondane Mountains, Antarctica, Reveals a Large Diversity of Autotrophic and Phototrophic Bacteria

Chemolithotrophic Primary Production in a Subglacial Ecosystem

(2014) Eric S. Boyd et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Bacterial Diversity Assessment in Antarctic Terrestrial and Aquatic Microbial Mats: A Comparison between Bidirectional Pyrosequencing and Cultivation

(2014) Bjorn Tytgat et al.   PLoS One

Stimulation of growth by proteorhodopsin phototrophy involves regulation of central metabolic pathways in marine planktonic bacteria

(2014) J. Palovaara et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Nature's toolkit for microbial rhodopsin ion pumps

(2014) O. Beja et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

pH is a good predictor of the distribution of anoxygenic purple phototrophic bacteria in Arctic soils

(2014) Youzhi Feng et al.   SOIL BIOLOGY & BIOCHEMISTRY

Proteorhodopsin

(2013) Christian Bamann et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Abundance and Genetic Diversity of Aerobic Anoxygenic Phototrophic Bacteria of Coastal Regions of the Pacific Ocean

(2012) Anna E. Ritchie et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Influence of Light on Carbon Utilization in Aerobic Anoxygenic Phototrophs

(2012) Dzmitry Hauruseu et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Significant Role for Microbial Autotrophy in the Sequestration of Soil Carbon

(2012) Hongzhao Yuan et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Diversity and functional analysis of proteorhodopsin in marine Flavobacteria

(2012) Susumu Yoshizawa et al.   ENVIRONMENTAL MICROBIOLOGY

Distribution and phylogenetic diversity of cbbM genes encoding RubisCO form II in a deep-sea hydrothermal field revealed by newly designed PCR primers

(2012) Shingo Kato et al.   EXTREMOPHILES

Evidence of form II RubisCO (cbbM) in a perennially ice-covered Antarctic lake

(2012) Weidong Kong et al.   FEMS MICROBIOLOGY ECOLOGY

Application of targeted metagenomics to explore abundance and diversity of CO2-fixing bacterial community using cbbL gene from the rhizosphere of Arachis hypogaea

(2012) Basit Yousuf et al.   GENE

A Comprehensive Evaluation of PCR Primers to Amplify the nifH Gene of Nitrogenase

(2012) John Christian Gaby et al.   PLoS One

Diversity of RuBisCO gene responsible for CO2 fixation in an Antarctic moss pillar

(2012) Ryosuke Nakai et al.   POLAR BIOLOGY

High cyanobacterial nifH gene diversity in Arctic seawater and sea ice brine

(2012) Beatriz Díez et al.   Environmental Microbiology Reports

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Rhodoferax-related pufM gene cluster dominates the aerobic anoxygenic phototrophic communities in German freshwater lakes

(2011) Ivette Salka et al.   ENVIRONMENTAL MICROBIOLOGY

Soil purple phototrophic bacterial diversity under double cropping (rice-wheat) with free-air CO2 enrichment (FACE)

(2011) Y. Feng et al.   EUROPEAN JOURNAL OF SOIL SCIENCE

Autotrophic Methanotrophy in Verrucomicrobia: Methylacidiphilum fumariolicumSolV Uses the Calvin-Benson-Bassham Cycle for Carbon Dioxide Fixation

(2011) A. F. Khadem et al.   JOURNAL OF BACTERIOLOGY

Elevated Ground-Level O3 Changes the Diversity of Anoxygenic Purple Phototrophic Bacteria in Paddy Field

(2011) Youzhi Feng et al.   MICROBIAL ECOLOGY

Application of ribulose-1,5-bisphosphate carboxylase/oxygenase genes as molecular markers for assessment of the diversity of autotrophic microbial communities inhabiting the upper sediment horizons of the saline and soda lakes of the Kulunda Steppe

(2011) T. P. Tourova et al.   MICROBIOLOGY

Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

(2011) F. Sievers et al.   Molecular Systems Biology

IMG: the integrated microbial genomes database and comparative analysis system

(2011) V. M. Markowitz et al.   NUCLEIC ACIDS RESEARCH

Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy

(2011) I. Letunic et al.   NUCLEIC ACIDS RESEARCH

Culturable bacterial diversity at the Princess Elisabeth Station (Utsteinen, Sør Rondane Mountains, East Antarctica) harbours many new taxa

(2011) Karolien Peeters et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Aerobic anoxygenic phototrophic bacteria in Antarctic sea ice and seawater

(2011) Eileen Y. Koh et al.   Environmental Microbiology Reports

Hypolithic communities: important nitrogen sources in Antarctic desert soils

(2011) D. A. Cowan et al.   Environmental Microbiology Reports

Proteorhodopsin-Bearing Bacteria in Antarctic Sea Ice

(2010) E. Y. Koh et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Diversity of RuBisCO and ATP citrate lyase genes in soda lake sediments

(2010) Olga L. Kovaleva et al.   FEMS MICROBIOLOGY ECOLOGY

Summer distribution and diversity of aerobic anoxygenic phototrophic bacteria in the Mediterranean Sea in relation to environmental variables

(2010) Anne-Catherine Lehours et al.   FEMS MICROBIOLOGY ECOLOGY

Response of Aerobic Anoxygenic Phototrophic Bacterial Diversity to Environment Conditions in Saline Lakes and Daotang River on the Tibetan Plateau, NW China

(2010) Hongchen Jiang et al.   GEOMICROBIOLOGY JOURNAL

Bacterial diversity in rhizosphere soil from Antarctic vascular plants of Admiralty Bay, maritime Antarctica

(2010) Lia C R S Teixeira et al.   ISME Journal

Ribulose-1,5-bisphosphate carboxylase/oxygenase genes as a functional marker for chemolithoautotrophic halophilic sulfur-oxidizing bacteria in hypersaline habitats

(2010) T. P. Tourova et al.   MICROBIOLOGY-SGM

A new bioinformatics analysis tools framework at EMBL-EBI

(2010) M. Goujon et al.   NUCLEIC ACIDS RESEARCH

Diversity of aerobic anoxygenic phototrophic bacteria in paddy soil and their response to elevated atmospheric CO2

(2010) Youzhi Feng et al.   Microbial Biotechnology

Photoheterotrophic Microbes in the Arctic Ocean in Summer and Winter

(2009) M. T. Cottrell et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Phylogeny and evolution of the ribulose 1,5-bisphosphate carboxylase/oxygenase genes in prokaryotes

(2009) T. P. Tourova et al.   MOLECULAR BIOLOGY

Free-air CO2 enrichment (FACE) enhances the biodiversity of purple phototrophic bacteria in flooded paddy soil

(2009) Youzhi Feng et al.   PLANT AND SOIL

Community structure of microorganisms associated with reddish-brown iron-rich snow

(2009) Hisaya Kojima et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Heterotrophic and Autotrophic Microbial Populations in Cold Perennial Springs of the High Arctic

(2008) N. N. Perreault et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Diversity and Distribution of Ecotypes of the Aerobic Anoxygenic Phototrophy Gene pufM in the Delaware Estuary

(2008) L. A. Waidner et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Antarctic terrestrial life – challenging the history of the frozen continent?

(2008) Peter Convey et al.   BIOLOGICAL REVIEWS

Distribution of aerobic anoxygenic phototrophs in temperate freshwater systems

(2008) Michal Man et al.   ENVIRONMENTAL MICROBIOLOGY

Spectroscopic and photochemical analysis of proteorhodopsin variants from the surface of the Arctic Ocean

(2008) Jae Yong Jung et al.   FEBS LETTERS

Abundance and diversity of aerobic anoxygenic phototrophic bacteria in saline lakes on the Tibetan plateau

(2008) Hongchen Jiang et al.   FEMS MICROBIOLOGY ECOLOGY

Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems

(2008) Nof Atamna-Ismaeel et al.   ISME Journal

Multiple Rubisco forms in proteobacteria: their functional significance in relation to CO2 acquisition by the CBB cycle

(2008) Murray Ronald Badger et al.   JOURNAL OF EXPERIMENTAL BOTANY

Presence of duplicate genes encoding a phylogenetically new subgroup of form I ribulose 1,5-bisphosphate carboxylase/oxygenase in Mycobacterium sp. strain JC1 DSM 3803

(2008) Sae Woong Park et al.   RESEARCH IN MICROBIOLOGY