Coregulation and modulation of NF B-related genes in celiac disease: uncovered aspects of gut mucosal inflammation

Transcriptome comparison and gene coexpression network analysis provide a systems view of citrus response to ‘Candidatus Liberibacter asiaticus’ infection

(2013) Zhi-Liang Zheng et al.   BMC GENOMICS

DNA co-methylation analysis suggests novel functional associations between gene pairs in breast cancer samples

(2013) Ruslan Akulenko et al.   HUMAN MOLECULAR GENETICS

Gene Expression Profiling of Gliadin Effects on Intestinal Epithelial Cells Suggests Novel Non-Enzymatic Functions of Pepsin and Trypsin

(2013) Amarjit Parmar et al.   PLoS One

Prolongation of carrageenan-induced inflammation in human colonic epithelial cells by activation of an NFκB‐BCL10 loop

(2012) Alip Borthakur et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE

Inflammation, DNA methylation and colitis-associated cancer

(2012) L. Hartnett et al.   CARCINOGENESIS

Cubic regression-based degree of correction predicts the performance of whole bisulfitome amplified DNA methylation analysis

(2012) Nora Fernandez-Jimenez et al.   Epigenetics

Charting the NF-κB Pathway Interactome Map

(2012) Paolo Tieri et al.   PLoS One

Reproducibility and Concordance of Differential DNA Methylation and Gene Expression in Cancer

(2012) Chen Yao et al.   PLoS One

Relationship between Tumor DNA Methylation Status and Patient Characteristics in African-American and European-American Women with Breast Cancer

(2012) Songping Wang et al.   PLoS One

Distinct Functional Patterns of Gene Promoter Hypomethylation and Hypermethylation in Cancer Genomes

(2012) Xiaopei Shen et al.   PLoS One

Coexpression network analysis in chronic hepatitis B and C hepatic lesions reveals distinct patterns of disease progression to hepatocellular carcinoma

(2012) Danning He et al.   Journal of Molecular Cell Biology

CpG island methylation profiling in human salivary gland adenoid cystic carcinoma

(2011) Achim Bell et al.   CANCER

From MALT lymphoma to the CBM signalosome

(2011) Shaun Rosebeck et al.   CELL CYCLE

NF-κB in immunobiology

(2011) Matthew S Hayden et al.   CELL RESEARCH

NFĸB is an Unexpected Major Mediator of Interleukin-15 Signaling in Cerebral Endothelia

(2011) Kirsten P. Stone et al.   CELLULAR PHYSIOLOGY AND BIOCHEMISTRY

Dense genotyping identifies and localizes multiple common and rare variant association signals in celiac disease

(2011) Gosia Trynka et al.   NATURE GENETICS

Correction of PCR-bias in quantitative DNA methylation studies by means of cubic polynomial regression

(2011) Evgeny A. Moskalev et al.   NUCLEIC ACIDS RESEARCH

DNA Methylation of the First Exon Is Tightly Linked to Transcriptional Silencing

(2011) Fabienne Brenet et al.   PLoS One

Malt1-dependent RelB cleavage promotes canonical NF- B activation in lymphocytes and lymphoma cell lines

(2011) S. Hailfinger et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Long-term and acute effects of gliadin on small intestine of patients on potentially pathogenic networks in celiac disease

(2010) Ainara Castellanos-Rubio et al.   AUTOIMMUNITY

Multiple common variants for celiac disease influencing immune gene expression

(2010) Patrick C A Dubois et al.   NATURE GENETICS

Babelomics: an integrative platform for the analysis of transcriptomics, proteomics and genomic data with advanced functional profiling

(2010) Ignacio Medina et al.   NUCLEIC ACIDS RESEARCH

From ‘differential expression’ to ‘differential networking’ – identification of dysfunctional regulatory networks in diseases

(2010) Alberto de la Fuente   TRENDS IN GENETICS

Coeliac disease-associated risk variants in TNFAIP3 and REL implicate altered NF- B signalling

(2009) G. Trynka et al.   GUT

Methylation status of normal background mucosa is correlated with occurrence and development of neoplasia in the distal colon

(2009) Sakiko Hiraoka et al.   HUMAN PATHOLOGY

Epigenomic Profiling Reveals DNA-Methylation Changes Associated with Major Psychosis

(2008) Jonathan Mill et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Shared Principles in NF-κB Signaling

(2008) Matthew S. Hayden et al.   CELL

The Paracaspase MALT1 Controls Caspase-8 Activation during Lymphocyte Proliferation

(2008) Holli Kawadler et al.   MOLECULAR CELL

The proteolytic activity of the paracaspase MALT1 is key in T cell activation

(2008) Fabien Rebeaud et al.   NATURE IMMUNOLOGY