Evolution and Classification of Myosins, a Paneukaryotic Whole-Genome Approach

Genome reduction as the dominant mode of evolution

(2013) Yuri I. Wolf et al.   BIOESSAYS

Stability along with Extreme Variability in Core Genome Evolution

(2013) Yuri I. Wolf et al.   Genome Biology and Evolution

A Genomic Survey of HECT Ubiquitin Ligases in Eukaryotes Reveals Independent Expansions of the HECT System in Several Lineages

(2013) Xavier Grau-Bové et al.   Genome Biology and Evolution

The Ancient and Widespread Nature of the ER–Mitochondria Encounter Structure

(2013) Jeremy G. Wideman et al.   MOLECULAR BIOLOGY AND EVOLUTION

Functional and evolutionary implications of gene orthology

(2013) Toni Gabaldón et al.   NATURE REVIEWS GENETICS

Coiled coils and SAH domains in cytoskeletal molecular motors

(2012) Michelle Peckham   BIOCHEMICAL SOCIETY TRANSACTIONS

Origin of land plants revisited in the light of sequence contamination and missing data

(2012) Simon Laurin-Lemay et al.   CURRENT BIOLOGY

The myosin superfamily at a glance

(2012) M. A. Hartman et al.   JOURNAL OF CELL SCIENCE

Deep relationships of Rhizaria revealed by phylogenomics: A farewell to Haeckel’s Radiolaria

(2012) Roberto Sierra et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Independent evolution of striated muscles in cnidarians and bilaterians

(2012) Patrick R. H. Steinmetz et al.   NATURE

Genome-scale comparative analysis of gene fusions, gene fissions, and the fungal tree of life

(2012) G. Leonard et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Gain and loss of multiple functionally related, horizontally transferred genes in the reduced genomes of two microsporidian parasites

(2012) J.-F. Pombert et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The evolutionary history of haptophytes and cryptophytes: phylogenomic evidence for separate origins

(2012) F. Burki et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Genomic Survey of Premetazoans Shows Deep Conservation of Cytoplasmic Tyrosine Kinases and Multiple Radiations of Receptor Tyrosine Kinases

(2012) H. Suga et al.   Science Signaling

This Déjà Vu Feeling—Analysis of Multidomain Protein Evolution in Eukaryotic Genomes

(2012) Christian M. Zmasek et al.   PLoS Computational Biology

Principles of Unconventional Myosin Function and Targeting

(2011) M. Amanda Hartman et al.   Annual Review of Cell and Developmental Biology

No jacket required - new fungal lineage defies dress code

(2011) Timothy Y. James et al.   BIOESSAYS

Ortholog identification in the presence of domain architecture rearrangement

(2011) K. Sjolander et al.   BRIEFINGS IN BIOINFORMATICS

A genomic survey shows that the haloarchaeal type tyrosyl tRNA synthetase is not a synapomorphy of opisthokonts

(2011) John D.L. Shadwick et al.   EUROPEAN JOURNAL OF PROTISTOLOGY

Regulation and function of the fission yeast myosins

(2011) D. A. East et al.   JOURNAL OF CELL SCIENCE

Evolution of Patchily Distributed Proteins Shared between Eukaryotes and Prokaryotes: Dictyostelium as a Case Study

(2011) Jan O. Andersson   JOURNAL OF MOLECULAR MICROBIOLOGY AND BIOTECHNOLOGY

Rooting the Eukaryotic Tree with Mitochondrial and Bacterial Proteins

(2011) R. Derelle et al.   MOLECULAR BIOLOGY AND EVOLUTION

Phylogenetic Relationships within the Opisthokonta Based on Phylogenomic Analyses of Conserved Single-Copy Protein Domains

(2011) G. Torruella et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Pfam protein families database

(2011) M. Punta et al.   NUCLEIC ACIDS RESEARCH

Expression, Splicing, and Evolution of the Myosin Gene Family in Plants

(2011) V. V. Peremyslov et al.   PLANT PHYSIOLOGY

Horizontal gene transfer facilitated the evolution of plant parasitic mechanisms in the oomycetes

(2011) T. A. Richards et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Extreme reduction and compaction of microsporidian genomes

(2011) Eric Peyretaillade et al.   RESEARCH IN MICROBIOLOGY

The SH2 Domain-Containing Proteins in 21 Species Establish the Provenance and Scope of Phosphotyrosine Signaling in Eukaryotes

(2011) B. A. Liu et al.   Science Signaling

Shaking the myosin family tree: Biochemical kinetics defines four types of myosin motor

(2011) Marieke J. Bloemink et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Strong functional patterns in the evolution of eukaryotic genomes revealed by the reconstruction of ancestral protein domain repertoires

(2011) Christian M Zmasek et al.   GENOME BIOLOGY

Patterns of kinesin evolution reveal a complex ancestral eukaryote with a multifunctional cytoskeleton

(2010) Bill Wickstead et al.   BMC EVOLUTIONARY BIOLOGY

Myosin VI Rewrites the Rules for Myosin Motors

(2010) H. Lee Sweeney et al.   CELL

The Genome of Naegleria gruberi Illuminates Early Eukaryotic Versatility

(2010) Lillian K. Fritz-Laylin et al.   CELL

The Complexity Hypothesis Revisited: Connectivity Rather Than Function Constitutes a Barrier to Horizontal Gene Transfer

(2010) O. Cohen et al.   MOLECULAR BIOLOGY AND EVOLUTION

Unexpected Repertoire of Metazoan Transcription Factors in the Unicellular Holozoan Capsaspora owczarzaki

(2010) A. Sebe-Pedros et al.   MOLECULAR BIOLOGY AND EVOLUTION

An unconventional myosin required for cell polarization and chemotaxis

(2010) L. M. Breshears et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

PhyloBayes 3: a Bayesian software package for phylogenetic reconstruction and molecular dating

(2009) Nicolas Lartillot et al.   BIOINFORMATICS

Evolution: Revisiting the Root of the Eukaryote Tree

(2009) Andrew J. Roger et al.   CURRENT BIOLOGY

Ancient animal ancestry for nuclear myosin

(2009) W. A. Hofmann et al.   JOURNAL OF CELL SCIENCE

Phylogenomic analyses support the monophyly of Excavata and resolve relationships among eukaryotic "supergroups"

(2009) V. Hampl et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Acquisition of prokaryotic genes by fungal genomes

(2009) Marina Marcet-Houben et al.   TRENDS IN GENETICS

Membrane traffic in the secretory pathway

(2008) S. Loubéry et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

An Improved General Amino Acid Replacement Matrix

(2008) S. Q. Le et al.   MOLECULAR BIOLOGY AND EVOLUTION

Broad phylogenomic sampling improves resolution of the animal tree of life

(2008) Casey W. Dunn et al.   NATURE

The protist, Monosiga brevicollis, has a tyrosine kinase signaling network more elaborate and diverse than found in any known metazoan

(2008) G. Manning et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Tail that Wags the Dog: The Globular Tail Domain Defines the Function of Myosin V/XI

(2008) Jian-Feng Li et al.   TRAFFIC