Vitamin B12 Synthesis and Salvage Pathways Were Acquired by Horizontal Gene Transfer to the Thermotogales

Mesotoga prima gen. nov., sp. nov., the first described mesophilic species of the Thermotogales

(2012) Camilla L. Nesbø et al.   EXTREMOPHILES

ProtTest 3: fast selection of best-fit models of protein evolution

(2011) Diego Darriba et al.   BIOINFORMATICS

A Rooted Net of Life

(2011) David Williams et al.   Biology Direct

An ABC-Type Cobalt Transport System Is Essential for Growth of Sinorhizobium melilotiat Trace Metal Concentrations

(2011) J. Cheng et al.   JOURNAL OF BACTERIOLOGY

Genome Sequence of Kosmotoga olearia Strain TBF 19.5.1, a Thermophilic Bacterium with a Wide Growth Temperature Range, Isolated from the Troll B Oil Platform in the North Sea

(2011) K. S. Swithers et al.   JOURNAL OF BACTERIOLOGY

Genome Sequence of Thermotoga sp. Strain RQ2, a Hyperthermophilic Bacterium Isolated from a Geothermally Heated Region of the Seafloor near Ribeira Quente, the Azores

(2011) K. S. Swithers et al.   JOURNAL OF BACTERIOLOGY

Phylogenomic Evidence for the Presence of a Flagellum and cbb3 Oxidase in the Free-Living Mitochondrial Ancestor

(2011) D. Sassera et al.   MOLECULAR BIOLOGY AND EVOLUTION

The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases

(2011) R. Caspi et al.   NUCLEIC ACIDS RESEARCH

Rooting the Ribosomal Tree of Life

(2010) G. P. Fournier et al.   MOLECULAR BIOLOGY AND EVOLUTION

CDD: a Conserved Domain Database for the functional annotation of proteins

(2010) A. Marchler-Bauer et al.   NUCLEIC ACIDS RESEARCH

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

Effect of Amino Acid Availability on Vitamin B12 Production in Lactobacillus reuteri

(2009) F. Santos et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Comparative genomic analyses of nickel, cobalt and vitamin B12 utilization

(2009) Yan Zhang et al.   BMC GENOMICS

Kosmotoga olearia gen. nov., sp. nov., a thermophilic, anaerobic heterotroph isolated from an oil production fluid

(2009) J. L. DiPippo et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

The Genome of Thermosipho africanus TCF52B: Lateral Genetic Connections to the Firmicutes and Archaea

(2009) C. L. Nesbo et al.   JOURNAL OF BACTERIOLOGY

On the chimeric nature, thermophilic origin, and phylogenetic placement of the Thermotogales

(2009) O. Zhaxybayeva et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Computational identification of riboswitches based on RNA conserved functional sequences and conformations

(2009) T.-H. Chang et al.   RNA

The RAST Server: Rapid Annotations using Subsystems Technology

(2008) Ramy K Aziz et al.   BMC GENOMICS

A seven-gene, multilocus, genus-wide approach to the phylogeny of mycobacteria using supertrees

(2008) S. Mignard et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY