Article
Chemistry, Medicinal
Laura Pascazio, Simon Rihm, Ali Naseri, Sebastian Mosbach, Jethro Akroyd, Markus Kraft
Summary: This paper presents OntoSpecies, a web ontology for representing chemical species and their properties. It serves as a core component of The World Avatar knowledge graph chemistry domain and provides reliable access to chemical data. OntoSpecies can solve complex tasks that require integrated semantically searchable chemical data, making it a significant advancement in chemical data management and scientific research.
JOURNAL OF CHEMICAL INFORMATION AND MODELING
(2023)
Article
Mathematics
Xiao Liu
Summary: This paper designs an enterprise economic information management system to address the inconsistencies and irregularities of enterprise economic information data and improve data management efficiency. By utilizing big data technology, the system achieves practicality, stability, and security, providing a theoretical basis and technical support for online decision analysis.
JOURNAL OF MATHEMATICS
(2022)
Article
Computer Science, Interdisciplinary Applications
Mostafa D. Fard, Hessam S. Sarjoughian
Summary: The WEAP system is a modeling and simulation tool that offers certain advantages for studying water systems. By embedding the WEAP system in a RESTful framework, the Componentized-WEAP (C-WEAP) system allows for integration with other software systems, providing a complete set of meta-components for water system entities.
SIMULATION MODELLING PRACTICE AND THEORY
(2021)
Article
Computer Science, Information Systems
Yuping Yan, Yutian Hong
Summary: This article introduces an implementation information management platform for distributed generation in distribution network based on information integration, aiming to improve the management and scheduling capability of distributed generation. By simulating load changes and distributed generation output, a planning model for distribution network expansion is established, considering line loss calculation and interface type confirmation. Test results show that the platform can accurately realize the information fusion and management of distributed generation, and solve related problems.
CLUSTER COMPUTING-THE JOURNAL OF NETWORKS SOFTWARE TOOLS AND APPLICATIONS
(2023)
Article
Ecology
Brenda Daly, Fhatani Ranwashe
Summary: Researchers and policymakers have urged the South African National Biodiversity Institute (SANBI) to develop a coordinated biodiversity informatics hub to access comprehensive biodiversity information. SANBI is redeveloping the Biodiversity Advisor platform to integrate various biodiversity datasets into a single source to address operational challenges such as limited infrastructure and taxonomic identifiers. The goal is to create a recognized platform for users to easily access most biodiversity data within South Africa.
FRONTIERS IN ECOLOGY AND EVOLUTION
(2023)
Article
Mathematics
Nahla Mohammed Elzein, Mazlina Abdul Majid, Ibrahim Abaker Targio Hashem, Ashraf Osman Ibrahim, Anas W. Abulfaraj, Faisal Binzagr
Summary: In the past decade, the volume of semantic data has exponentially increased, with trillions of triples in RDF repositories. Complex multiple RDF queries are in high demand, leading to the development of the JQPro model which outperforms other popular algorithms in terms of execution time.
Article
Computer Science, Information Systems
Gyan Prakash Tiwary, Eleni Stroulia, Abhishek Srivastava
Summary: The de-facto standard mechanism for data service providers to share services is through web-service interfaces, while data service composition method relies on a mediator to ensure communication security and privacy maintenance. Data integrity and privacy security are ensured by validating the source and destination of data.
Article
Chemistry, Analytical
Marzia Ciampittiello, Dario Manca, Claudia Dresti, Stefano Grisoni, Andrea Lami, Helmi Saidi
Summary: Climate change and human activities have significant impacts on lakes and their catchments, requiring a well-distributed and high frequency network to monitor environmental variables and share data efficiently. The PITAGORA project developed low-cost, easily implementable, and reliable instruments for measuring various environmental parameters, adaptable to different monitoring purposes.
Article
Computer Science, Information Systems
Soheila Sadeghiram, Hui Ma, Gang Chen
Summary: Web Service Composition (WSC) allows for effective reuse of services and added value, but current methods neglect the impact of data communication and service distribution on performance. Our proposed priority-based local search selection method for Distributed Data-intensive Web Service Composition (DDWSC) overcomes this issue and outperforms recent methods.
IEEE TRANSACTIONS ON SERVICES COMPUTING
(2022)
Article
Biochemistry & Molecular Biology
Rodrigo Honorato, Panagiotis Koukos, Brian Jimenez-Garcia, Andrei Tsaregorodtsev, Marco Verlato, Andrea Giachetti, Antonio Rosato, Alexandre M. J. J. Bonvin
Summary: Structural biology focuses on studying the structural and dynamic properties of biological macromolecules at atomic level, which is crucial for understanding cellular processes and has applications in health and food sciences. The WeNMR project has provided web-based services and high throughput computing infrastructure to over 23,000 users worldwide for 10 years, facilitating complex workflows in structural biology research.
FRONTIERS IN MOLECULAR BIOSCIENCES
(2021)
Article
Computer Science, Theory & Methods
Diego Serrano, Eleni Stroulia
Summary: The number of Web APIs is increasing, yet tools to automate the process of invoking APIs and composing responses are lacking. The LRA methodology relies on RDF service specifications to automate Web API development, with the LRAWbench simplifying the formulation of LRA-compliant SPARQL queries. Empirical evaluation shows that the LRAWbench significantly improves developers' performance in formulating SPARQL queries for LRA.
JOURNAL OF BIG DATA
(2021)
Article
Biochemical Research Methods
Zilong Zhang, Feifei Cui, Wei Su, Lijun Dou, Anqi Xu, Chen Cao, Quan Zou
Summary: In this study, a web-based scRNA-seq analysis tool called webSCST is introduced, which integrates well-organized spatial transcriptome sequencing datasets classified by species and organs. It provides a user-friendly interface for raw single-cell processing and popular integration methods, allowing users to obtain predicted spatial locations for each cell type by submitting their raw scRNA-seq data once.
Article
Business
Animesh Chaturvedi, Aruna Tiwari, Dave Binkley, Shubhangi Chaturvedi
Summary: This article presents an approach based on interface slicing and service evolution metrics for analyzing evolving distributed systems. Through experiments, it demonstrates the ability of the AWSCM tool to exploit change and evolution mining.
IEEE TRANSACTIONS ON ENGINEERING MANAGEMENT
(2021)
Article
Computer Science, Hardware & Architecture
Fan Zhou, Weifeng Zhang, Yong Wang, Ting Zhong, Goce Trajcevski, Ashfaq Khokhar
Summary: Understanding the initial assignment and predicting the potential usage of an IP address can improve the efficiency of IP-based applications. However, there is a lack of research and benchmark datasets in this area. This paper collects large-scale real-world data and uses sophisticated networking tools to extract features, introducing a series of tabular information retrieval methods to learn network signals and identify IP usage scenarios.
Article
Physics, Multidisciplinary
Alexa J. Halford, Thomas Y. Chen, Lutz Rastaetter
Summary: FAIR data principles are crucial for heliophysics and scientific research, ensuring data reusability and findability. However, there are still challenges with data findability and lack of DOIs for data in archives that need to be addressed.
FRONTIERS IN PHYSICS
(2022)
Article
Agronomy
Anthony J. Travis, Gareth J. Norton, Sutapa Datta, Ramendra Sarma, Tapash Dasgupta, Filipe L. Savio, Malcolm Macaulay, Peter E. Hedley, Kenneth L. McNally, Mahmud H. Sumon, M. Rafiqul Islam, Adam H. Price
Article
Immunology
Angela M. Patterson, Imke E. Mulder, Anthony J. Travis, Annaig Lan, Nadine Cerf-Bensussan, Valerie Gaboriau-Routhiau, Karen Garden, Elizabeth Logan, Margaret I. Delday, Alistair G. P. Coutts, Edouard Monnais, Vanessa C. Ferraria, Ryo Inoue, George Grant, Rustam I. Aminov
FRONTIERS IN IMMUNOLOGY
(2017)
Article
Agronomy
Gareth J. Norton, Anthony J. Travis, John M. C. Danku, David E. Salt, Mahmud Hossain, Md. Rafiqul Islam, Adam H. Price
FOOD AND ENERGY SECURITY
(2017)
Article
Biochemical Research Methods
Steffen Moeller, Enis Afgan, Michael Banck, Raoul J. P. Bonnal, Timothy Booth, John Chilton, Peter J. A. Cock, Markus Gumbel, Nomi Harris, Richard Holland, Matus Kalas, Laszlo Kajan, Eri Kibukawa, David R. Powel, Pjotr Prins, Jacqueline Quinn, Olivier Sallou, Francesco Strozzi, Torsten Seemann, Clare Sloggett, Stian Soiland-Reyes, William Spooner, Sascha Steinbiss, Andreas Tille, Anthony J. Travis, Roman Valls Guimera, Toshiaki Katayama, Brad A. Chapman
BMC BIOINFORMATICS
(2014)
Review
Genetics & Heredity
Ben van Ommen, Jildau Bouwman, Lars O. Dragsted, Christian A. Drevon, Ruan Elliott, Philip de Groot, Jim Kaput, John C. Mathers, Michael Mueller, Fre Pepping, Jahn Saito, Augustin Scalbert, Marijana Radonjic, Philippe Rocca-Serra, Anthony Travis, Suzan Wopereis, Chris T. Evelo
GENES AND NUTRITION
(2010)
Article
Chemistry, Physical
Geraldo M. de Lima, Bruce F. Milne, Robson P. Pereira, Ana Maria Rocco, Janet M. S. Skakle, Anthony J. Travis, James L. Wardell, Solange M. S. V. Wardell
JOURNAL OF MOLECULAR STRUCTURE
(2009)
Article
Biochemical Research Methods
Anthony J. Travis, Jonathan Moody, Aleksandra Helwak, David Tollervey, Grzegorz Kudla
Article
Multidisciplinary Sciences
Marco T. Rincon, Bareket Dassa, Harry J. Flint, Anthony J. Travis, Sadanari Jindou, Ilya Borovok, Raphael Lamed, Edward A. Bayer, Bernard Henrissat, Pedro M. Coutinho, Dion A. Antonopoulos, Margret E. Berg Miller, Bryan A. White
Article
Plant Sciences
Gareth J. Norton, Anthony J. Travis, Alex Douglas, Susan Fairley, Eduardo De Paiva Alves, Panthita Ruang-areerate, Ma. Elizabeth B. Naredo, Kenneth L. McNally, Mahmud Hossain, Md. Rafiqul Islam, Adam H. Price
FRONTIERS IN PLANT SCIENCE
(2018)
Article
Ecology
Panthita Ruang-areerate, Anthony J. Travis, Shannon R. M. Pinson, Lee Tarpley, Georgia C. Eizenga, Mary Lou Guerinot, David E. Salt, Alex Douglas, Adam H. Price, Gareth J. Norton
Summary: This study utilized two genome-wide association study approaches to identify valuable quantitative trait loci (QTL) and candidate genes responsible for the concentration of grain Mn in diverse rice cultivars. Major QTLs and candidate genes were located on chromosomes 3 and 7, demonstrating the utility of multi-experiment analysis to facilitate genomic breeding programs.
Article
Agronomy
Gareth J. Norton, Mohammad Shafaei, Anthony J. Travis, Claire M. Deacon, John Danku, Dawn Pond, Nicole Cochrane, Keith Lockhart, David Salt, Hao Zhang, Ian C. Dodd, Mahmud Hossain, M. Rafiqul Islam, Adam H. Price
FIELD CROPS RESEARCH
(2017)
Article
Microbiology
Anthony J. Travis, Denise Kelly, Harry J. Flint, Rustam I. Aminov
GENOME ANNOUNCEMENTS
(2015)
Article
Microbiology
CJ Newbold, NR McEwan, RE Calza, EN Chareyron, SM Duval, SCP Eschenlauer, FM McIntosh, N Nelson, AJ Travis, RJ Wallace
FEMS MICROBIOLOGY LETTERS
(2005)
Article
Chemistry, Applied
BF Milne, RP Pereira, AM Rocco, JMS Skakle, AJ Travis, JL Wardell, SMSV Wardell
APPLIED ORGANOMETALLIC CHEMISTRY
(2005)