Characterization of transcriptional responses mediated by benzo[a]pyrene stress in a new marine fish model of goby, Mugilogobius chulae

Comparative transcriptome analysis reveals the gene expression profiling in bighead carp ( Aristichthys nobilis ) in response to acute nitrite toxicity

(2018) Ling-Hong Miao et al.   FISH & SHELLFISH IMMUNOLOGY

De novo transcriptome assembly of the new marine fish model of goby, Mugilogobius chulae

(2018) Lei Cai et al.   Marine Genomics

The simultaneous uptake of dietary and waterborne Cd in gastrointestinal tracts of marine yellowstripe goby Mugilogobius chulae

(2017) Zhiqiang Guo et al.   ENVIRONMENTAL POLLUTION

Novel transcriptome assembly and comparative toxicity pathway analysis in mahi-mahi (Coryphaena hippurus) embryos and larvae exposed to Deepwater Horizon oil

(2017) Elvis Genbo Xu et al.   Scientific Reports

Short-term exposure to benzo[a]pyrene causes oxidative damage and affects haemolymph steroid levels in female crab Portunus trituberculatus

(2016) Jianmin Wen et al.   ENVIRONMENTAL POLLUTION

Transcriptional response to heat shock in liver of snow trout (Schizothorax richardsonii)—a vulnerable Himalayan Cyprinid fish

(2016) Ashoktaru Barat et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

De novo assembly and annotation of the European abalone Haliotis tuberculata transcriptome

(2016) Ewan Harney et al.   Marine Genomics

Liver transcriptome sequencing and de novo annotation of the large yellow croaker ( Larimichthy crocea ) under heat and cold stress

(2016) Baoying Qian et al.   Marine Genomics

Tissue-specific in vivo genetic toxicity of nine polycyclic aromatic hydrocarbons assessed using the Muta™Mouse transgenic rodent assay

(2016) Alexandra S. Long et al.   TOXICOLOGY AND APPLIED PHARMACOLOGY

Effects of crude oil exposure and elevated temperature on the liver transcriptome of polar cod (Boreogadus saida)

(2015) Øivind Andersen et al.   AQUATIC TOXICOLOGY

Differential gene expression analysis of benzo(a)pyrene toxicity in the clam, Ruditapes philippinarum

(2015) Tong Liu et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Transcriptome profiling analysis of naked carp (Gymnocypris przewalskii) provides insights into the immune-related genes in highland fish

(2015) Chao Tong et al.   FISH & SHELLFISH IMMUNOLOGY

De novo characterization of the liver transcriptome of javelin goby Synechogobius hasta and analysis of its transcriptomic profile following waterborne copper exposure

(2015) Qi-Liang Chen et al.   FISH PHYSIOLOGY AND BIOCHEMISTRY

Transcriptome characterization and SSR discovery in large-scale loach Paramisgurnus dabryanus (Cobitidae, Cypriniformes)

(2015) Caijuan Li et al.   GENE

Life-history transitions of the coral-reef fishElacatinus lori

(2015) A. J. Rickborn et al.   JOURNAL OF FISH BIOLOGY

Deep sequencing of the scallop Chlamys farreri transcriptome response to tetrabromobisphenol A (TBBPA) stress

(2015) Fengxiao Hu et al.   Marine Genomics

Complete mitochondrial genome of Mugilogobius chulae (Perciformes: Gobiidae)

(2015) Lei Cai et al.   Mitochondrial DNA Part A

Fatty Acid Binding Protein 7 Regulates Phagocytosis and Cytokine Production in Kupffer Cells during Liver Injury

(2014) Hirofumi Miyazaki et al.   AMERICAN JOURNAL OF PATHOLOGY

Impaired liver function in Xenopus tropicalis exposed to benzo[a]pyrene: transcriptomic and metabolic evidence

(2014) Christophe Regnault et al.   BMC GENOMICS

Use of toxicogenomics to predict the potential toxic effect of Benzo(a)pyrene on zebrafish embryos: Ocular developmental toxicity

(2014) Lixing Huang et al.   CHEMOSPHERE

Concentrations and sources of polycyclic aromatic hydrocarbons in surface coastal sediments of the northern Gulf of Mexico

(2014) Zucheng Wang et al.   GEOCHEMICAL TRANSACTIONS

Adiponectin is essential for lipid homeostasis and survival under insulin deficiency and promotes β-cell regeneration

(2014) Risheng Ye et al.   eLife

Polycyclic aromatic hydrocarbons in the coastal sea water, the surface sediment and Mudskipper Boleophthalmus dussumieri from coastal areas of the Persian Gulf: source investigation, composition pattern and spatial distribution

(2014) Mahmood Sinaei et al.   Journal of Environmental Health Science and Engineering

An investigation of endocrine disrupting effects and toxic mechanisms modulated by benzo[a]pyrene in female scallop Chlamys farreri

(2013) Shuangmei Tian et al.   AQUATIC TOXICOLOGY

A review of airborne polycyclic aromatic hydrocarbons (PAHs) and their human health effects

(2013) Ki-Hyun Kim et al.   ENVIRONMENT INTERNATIONAL

Polycyclic aromatic hydrocarbon levels in European catfish from the upper Po River basin

(2013) Stefania Squadrone et al.   ENVIRONMENTAL MONITORING AND ASSESSMENT

Toxicogenomic outcomes predictive of forestomach carcinogenesis following exposure to benzo(a)pyrene: Relevance to human cancer risk

(2013) Sarah Labib et al.   TOXICOLOGY AND APPLIED PHARMACOLOGY

Deep sequencing-based transcriptome profiling analysis of Oryzias melastigma exposed to PFOS

(2012) Qiansheng Huang et al.   AQUATIC TOXICOLOGY

Phosphatidate phosphatase, a key regulator of lipid homeostasis

(2012) Florencia Pascual et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS

Lycopene inhibits hepatic steatosis via microRNA-21-induced downregulation of fatty acid-binding protein 7 in mice fed a high-fat diet

(2012) Jiyun Ahn et al.   MOLECULAR NUTRITION & FOOD RESEARCH

Cytochrome P450 1C1 complementary DNA cloning, sequence analysis and constitutive expression induced by benzo-a-pyrene in Nile tilapia (Oreochromis niloticus)

(2011) Abeer A.I. Hassanin et al.   AQUATIC TOXICOLOGY

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Analysis of the regulation of fatty acid binding protein 7 expression in human renal carcinoma cell lines

(2011) Naohisa Takaoka et al.   BMC MOLECULAR BIOLOGY

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Transcriptomics Responses in Marine Diatom Thalassiosira pseudonana Exposed to the Polycyclic Aromatic Hydrocarbon Benzo[a]pyrene

(2011) Raquel N. Carvalho et al.   PLoS One

PHOSPHATIDIC ACID PHOSPHOHYDROLASE1 and 2 Regulate Phospholipid Synthesis at the Endoplasmic Reticulum in Arabidopsis

(2010) P. J. Eastmond et al.   PLANT CELL

Polycyclic Aromatic Hydrocarbon Contamination of Recent Sediments and Marine Organisms from Xiamen Bay, China

(2009) Qingzhao Li et al.   ARCHIVES OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY

Phosphatidate degradation: Phosphatidate phosphatases (lipins) and lipid phosphate phosphatases

(2009) David N. Brindley et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS

DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

(2009) Likun Wang et al.   BIOINFORMATICS

Distributions of polycyclic aromatic hydrocarbons in the Daliao River Estuary of Liaodong Bay, Bohai Sea (China)

(2009) Bin Men et al.   MARINE POLLUTION BULLETIN

RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays

(2008) J. C. Marioni et al.   GENOME RESEARCH