A model of yeast glycolysis based on a consistent kinetic characterisation of all its enzymes

A community-driven global reconstruction of human metabolism

(2013) Ines Thiele et al.   NATURE BIOTECHNOLOGY

Improving metabolic flux predictions using absolute gene expression data

(2012) Dave Lee et al.   BMC Systems Biology

The genetic control of growth rate: a systems biology study in yeast

(2012) Pınar Pir et al.   BMC Systems Biology

Yeast 5 – an expanded reconstruction of the Saccharomyces cerevisiae metabolic network

(2012) Benjamin D Heavner et al.   BMC Systems Biology

Whyin vivomay not equalin vitro- new effectors revealed by measurement of enzymatic activities under the samein vivo-like assay conditions

(2012) Rodolfo García-Contreras et al.   FEBS Journal

Epistemic and methodological iteration in scientific research

(2012) Kevin C. Elliott   STUDIES IN HISTORY AND PHILOSOPHY OF SCIENCE

Testing Biochemistry Revisited: How In Vivo Metabolism Can Be Understood from In Vitro Enzyme Kinetics

(2012) Karen van Eunen et al.   PLoS Computational Biology

Fifteen years of large scale metabolic modeling of yeast: Developments and impacts

(2011) Tobias Österlund et al.   BIOTECHNOLOGY ADVANCES

How yeast re-programmes its transcriptional profile in response to different nutrient impulses

(2011) Duygu Dikicioglu et al.   BMC Systems Biology

Absolute Quantification of the Glycolytic Pathway in Yeast:

(2011) Kathleen M. Carroll et al.   MOLECULAR & CELLULAR PROTEOMICS

Controlled vocabularies and semantics in systems biology

(2011) M. Courtot et al.   Molecular Systems Biology

Further developments towards a genome-scale metabolic model of yeast

(2010) Paul D Dobson et al.   BMC Systems Biology

BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models

(2010) Chen Li et al.   BMC Systems Biology

Enzyme kinetics informatics: from instrument to browser

(2010) Neil Swainston et al.   FEBS Journal

The renaissance of continuous culture in the post-genomics age

(2010) Alan T. Bull   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

Parameter Balancing in Kinetic Models of Cell Metabolism†

(2010) Timo Lubitz et al.   JOURNAL OF PHYSICAL CHEMISTRY B

A probabilistic approach to identify putative drug targets in biochemical networks

(2010) E. Murabito et al.   Journal of the Royal Society Interface

A QconCAT informatics pipeline for the analysis, visualization and sharing of absolute quantitative proteomics data

(2010) Neil Swainston et al.   PROTEOMICS

Mass spectrometry tools and metabolite-specific databases for molecular identification in metabolomics

(2009) M. Brown et al.   ANALYST

Development and Performance of a Gas Chromatography−Time-of-Flight Mass Spectrometry Analysis for Large-Scale Nontargeted Metabolomic Studies of Human Serum

(2009) Paul Begley et al.   ANALYTICAL CHEMISTRY

Development of a Robust and Repeatable UPLC−MS Method for the Long-Term Metabolomic Study of Human Serum

(2009) Eva Zelena et al.   ANALYTICAL CHEMISTRY

libAnnotationSBML: a library for exploiting SBML annotations

(2009) N. Swainston et al.   BIOINFORMATICS

Systems Biology: The elements and principles of Life

(2009) Hans V. Westerhoff et al.   FEBS LETTERS

Progress in Metabolic Engineering of Saccharomyces cerevisiae

(2008) E. Nevoigt   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology

(2008) Markus J Herrgård et al.   NATURE BIOTECHNOLOGY

Impact of systems biology on metabolic engineering ofSaccharomyces cerevisiae

(2007) Jens Nielsen et al.   FEMS YEAST RESEARCH