Evolution of variety-specific regulatory schema for expression of osa-miR408 inindicarice varieties under drought stress

Identification of conserved and novel microRNAs in Aquilaria sinensis based on small RNA sequencing and transcriptome sequence data

(2012) Zhi-Hui Gao et al.   GENE

Modulation of chlorophyll biosynthesis by water stress in rice seedlings during chloroplast biogenesis*

(2012) VIJAY K. DALAL et al.   PLANT CELL AND ENVIRONMENT

Identification of sucrose-responsive microRNAs reveals sucrose-regulated copper accumulations in an SPL7-dependent and independent manner in Arabidopsis thaliana

(2012) Ligang Ren et al.   PLANT SCIENCE

GsAPK, an ABA-Activated and Calcium-Independent SnRK2-Type Kinase from G. soja, Mediates the Regulation of Plant Tolerance to Salinity and ABA Stress

(2012) Liang Yang et al.   PLoS One

Characterization of miRNAs in Response to Short-Term Waterlogging in Three Inbred Lines of Zea mays

(2012) Zhijie Liu et al.   PLoS One

Functions of microRNAs in plant stress responses

(2012) Ramanjulu Sunkar et al.   TRENDS IN PLANT SCIENCE

Identification of drought-responsive microRNAs in Medicago truncatula by genome-wide high-throughput sequencing

(2011) Tianzuo Wang et al.   BMC GENOMICS

Conservation and Diversity of MicroRNA-associated Copper-regulatory Networks in Populus trichocarpaF

(2011) Shanfa Lu et al.   Journal of Integrative Plant Biology

MicroRNA regulated defense responses in Triticum aestivum L. during Puccinia graminis f.sp. tritici infection

(2011) Om Prakash Gupta et al.   MOLECULAR BIOLOGY REPORTS

psRNATarget: a plant small RNA target analysis server

(2011) Xinbin Dai et al.   NUCLEIC ACIDS RESEARCH

Expression and tissue-specific localization of nitrate-responsive miRNAs in roots of maize seedlings

(2011) SARA TREVISAN et al.   PLANT CELL AND ENVIRONMENT

AGO1 and AGO2 Act Redundantly in miR408-Mediated Plantacyanin Regulation

(2011) Nicolas Maunoury et al.   PLoS One

Genome-Wide Identification of MicroRNAs in Response to Low Nitrate Availability in Maize Leaves and Roots

(2011) Zhenhua Xu et al.   PLoS One

The Phytocyanin Gene Family in Rice (Oryza sativa L.): Genome-Wide Identification, Classification and Transcriptional Analysis

(2011) Haoli Ma et al.   PLoS One

Regulation of barley miRNAs upon dehydration stress correlated with target gene expression

(2010) Melda Kantar et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Drought-induced site-specific DNA methylation and its association with drought tolerance in rice (Oryza sativa L.)

(2010) Wen-Sheng Wang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genome-wide identification and analysis of drought-responsive microRNAs in Oryza sativa

(2010) Liguo Zhou et al.   JOURNAL OF EXPERIMENTAL BOTANY

Global expression profiling of rice microRNAs by one-tube stem-loop reverse transcription quantitative PCR revealed important roles of microRNAs in abiotic stress responses

(2010) Jianqiang Shen et al.   MOLECULAR GENETICS AND GENOMICS

starBase: a database for exploring microRNA–mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data

(2010) Jian-Hua Yang et al.   NUCLEIC ACIDS RESEARCH

Comparative analysis of drought-responsive transcriptome in Indica rice genotypes with contrasting drought tolerance

(2010) Sangram K. Lenka et al.   PLANT BIOTECHNOLOGY JOURNAL

Genome-wide mapping of the HY5-mediated genenetworks in Arabidopsis that involve both transcriptional and post-transcriptional regulation

(2010) Huiyong Zhang et al.   PLANT JOURNAL

Transcriptome-wide identification of microRNA targets in rice

(2010) Yong-Fang Li et al.   PLANT JOURNAL

Research on plant abiotic stress responses in the post-genome era: past, present and future

(2010) Takashi Hirayama et al.   PLANT JOURNAL

Bacteria-responsive microRNAs regulate plant innate immunity by modulating plant hormone networks

(2010) Weixiong Zhang et al.   PLANT MOLECULAR BIOLOGY

The biosynthetic pathways and biological scopes of plant small RNAs

(2010) Franck Vazquez et al.   TRENDS IN PLANT SCIENCE

Construction of Parallel Analysis of RNA Ends (PARE) libraries for the study of cleaved miRNA targets and the RNA degradome

(2009) Marcelo A German et al.   Nature Protocols

PMRD: plant microRNA database

(2009) Zhenhai Zhang et al.   NUCLEIC ACIDS RESEARCH

Rice MicroRNA Effector Complexes and Targets

(2009) L. Wu et al.   PLANT CELL

SQUAMOSA Promoter Binding Protein-Like7 Is a Central Regulator for Copper Homeostasis in Arabidopsis

(2009) H. Yamasaki et al.   PLANT CELL

Differential and dynamic regulation of miR398 in response to ABA and salt stress in Populus tremula and Arabidopsis thaliana

(2009) Xiaoyun Jia et al.   PLANT MOLECULAR BIOLOGY

Identification of Nutrient-Responsive Arabidopsis and Rapeseed MicroRNAs by Comprehensive Real-Time Polymerase Chain Reaction Profiling and Small RNA Sequencing

(2009) B. D. Pant et al.   PLANT PHYSIOLOGY

Uncovering Small RNA-Mediated Responses to Phosphate Deficiency in Arabidopsis by Deep Sequencing

(2009) L.-C. Hsieh et al.   PLANT PHYSIOLOGY

Heat shock factor gene family in rice: Genomic organization and transcript expression profiling in response to high temperature, low temperature and oxidative stresses

(2009) Dheeraj Mittal et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

miR398 and miR408 are up-regulated in response to water deficit in Medicago truncatula

(2009) Inês Trindade et al.   PLANTA

MicroRNA-mediated Systemic Down-regulation of Copper Protein Expression in Response to Low Copper Availability inArabidopsis

(2008) Salah E. Abdel-Ghany et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Heavy metal-regulated new microRNAs from rice

(2008) Si Qi Huang et al.   JOURNAL OF INORGANIC BIOCHEMISTRY

Microarray-based analysis of stress-regulated microRNAs in Arabidopsis thaliana

(2008) H.-H. Liu et al.   RNA

Comparative study of SBP-box gene family in Arabidopsis and rice

(2007) Zefeng Yang et al.   GENE