Predictions versus high-throughput experiments in T-cell epitope discovery: competition or synergy?
出版年份 2011 全文链接
标题
Predictions versus high-throughput experiments in T-cell epitope discovery: competition or synergy?
作者
关键词
-
出版物
Expert Review of Vaccines
Volume 11, Issue 1, Pages 43-54
出版商
Informa UK Limited
发表日期
2011-12-08
DOI
10.1586/erv.11.160
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Insights into MHC class I antigen processing gained from large-scale analysis of class I ligands
- (2011) Gabor Mester et al. CELLULAR AND MOLECULAR LIFE SCIENCES
- Alternative pathways for MHC class I presentation: a new function for autophagy
- (2011) Magali Chemali et al. CELLULAR AND MOLECULAR LIFE SCIENCES
- Post-proteasomal and proteasome-independent generation of MHC class I ligands
- (2011) Peter van Endert CELLULAR AND MOLECULAR LIFE SCIENCES
- Generation of MHC class I ligands in the secretory and vesicular pathways
- (2011) Margarita Del Val et al. CELLULAR AND MOLECULAR LIFE SCIENCES
- The role of the proteasome in the generation of MHC class I ligands and immune responses
- (2011) E. J. A. M. Sijts et al. CELLULAR AND MOLECULAR LIFE SCIENCES
- Antigen cross-presentation: extending recent laboratory findings to therapeutic intervention
- (2011) T. W. H. Flinsenberg et al. CLINICAL AND EXPERIMENTAL IMMUNOLOGY
- First in humans: A new molecularly defined vaccine shows excellent safety and strong induction of long-livedMycobacterium tuberculosis-specific Th1-cell like responses
- (2011) Tom H. M. Ottenhoff et al. Human vaccines & immunotherapeutics
- Porcine major histocompatibility complex (MHC) class I molecules and analysis of their peptide-binding specificities
- (2011) Lasse Eggers Pedersen et al. IMMUNOGENETICS
- Machine learning competition in immunology – Prediction of HLA class I binding peptides
- (2011) Guang Lan Zhang et al. JOURNAL OF IMMUNOLOGICAL METHODS
- Proteasomes, TAP, and Endoplasmic Reticulum-Associated Aminopeptidase Associated with Antigen Processing Control CD4+ Th Cell Responses by Regulating Indirect Presentation of MHC Class II-Restricted Cytoplasmic Antigens
- (2011) S. M. Dragovic et al. JOURNAL OF IMMUNOLOGY
- Simultaneous Isolation of CD8+ and CD4+ T Cells Specific for Multiple Viruses for Broad Antiviral Immune Reconstitution After Allogeneic Stem Cell Transplantation
- (2011) Maarten L. Zandvliet et al. JOURNAL OF IMMUNOTHERAPY
- Small molecule modulators of MHC class II antigen presentation: Mechanistic insights and implications for therapeutic application
- (2011) Melissa J. Call MOLECULAR IMMUNOLOGY
- The genome sequence of Atlantic cod reveals a unique immune system
- (2011) Bastiaan Star et al. NATURE
- Immunological mechanisms of vaccination
- (2011) Bali Pulendran et al. NATURE IMMUNOLOGY
- Subdominant/Cryptic CD8 T Cell Epitopes Contribute to Resistance against Experimental Infection with a Human Protozoan Parasite
- (2011) Mariana R. Dominguez et al. PLoS One
- Therapeutic enzyme deimmunization by combinatorial T-cell epitope removal using neutral drift
- (2011) J. R. Cantor et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A Modular and Combinatorial View of the Antigen Cross-Presentation Pathway in Dendritic Cells
- (2011) Elodie Segura et al. TRAFFIC
- KIR Polymorphisms Modulate Peptide-Dependent Binding to an MHC Class I Ligand with a Bw6 Motif
- (2011) Arnaud D. Colantonio et al. PLoS Pathogens
- Protective Efficacy of Serially Up-Ranked Subdominant CD8+ T Cell Epitopes against Virus Challenges
- (2011) Eung-Jun Im et al. PLoS Pathogens
- Computational analysis and modeling of cleavage by the immunoproteasome and the constitutive proteasome
- (2010) Carmen M Diez-Rivero et al. BMC BIOINFORMATICS
- Peptide binding predictions for HLA DR, DP and DQ molecules
- (2010) Peng Wang et al. BMC BIOINFORMATICS
- Human Leukocyte Antigens A*3001 and A*3002 Show Distinct Peptide-Binding Patterns of theMycobacterium tuberculosisProtein TB10.4: Consequences for Immune Recognition
- (2010) Rebecca Axelsson-Robertson et al. Clinical and Vaccine Immunology
- Intracellular mechanisms of antigen cross presentation in dendritic cells
- (2010) Sebastian Amigorena et al. CURRENT OPINION IN IMMUNOLOGY
- Routes to manipulate MHC class II antigen presentation
- (2010) Tineke van den Hoorn et al. CURRENT OPINION IN IMMUNOLOGY
- HLArestrictor—a tool for patient-specific predictions of HLA restriction elements and optimal epitopes within peptides
- (2010) Malene Erup Larsen et al. IMMUNOGENETICS
- NetCTLpan: pan-specific MHC class I pathway epitope predictions
- (2010) Thomas Stranzl et al. IMMUNOGENETICS
- MHC Class II epitope predictive algorithms
- (2010) Morten Nielsen et al. IMMUNOLOGY
- Major histocompatibility complex class I binding predictions as a tool in epitope discovery
- (2010) Claus Lundegaard et al. IMMUNOLOGY
- Antigen-driven T-cell repertoire selection during adaptive immune responses
- (2010) Christina K Baumgartner et al. IMMUNOLOGY AND CELL BIOLOGY
- High Throughput T Epitope Mapping and Vaccine Development
- (2010) Giuseppina Li Pira et al. JOURNAL OF BIOMEDICINE AND BIOTECHNOLOGY
- A recombinant human HLA-class I antigen linked to dextran elicits innate and adaptive immune responses
- (2010) Jorgen Schøller et al. JOURNAL OF IMMUNOLOGICAL METHODS
- Prediction of epitopes using neural network based methods
- (2010) Claus Lundegaard et al. JOURNAL OF IMMUNOLOGICAL METHODS
- Real-time, high-throughput measurements of peptide–MHC-I dissociation using a scintillation proximity assay
- (2010) Mikkel Harndahl et al. JOURNAL OF IMMUNOLOGICAL METHODS
- Interdisciplinary Analysis of HIV-Specific CD8+ T Cell Responses against Variant Epitopes Reveals Restricted TCR Promiscuity
- (2010) I. Hoof et al. JOURNAL OF IMMUNOLOGY
- Responses against a Subdominant CD8+ T Cell Epitope Protect against Immunopathology Caused by a Dominant Epitope
- (2010) T. J. Ruckwardt et al. JOURNAL OF IMMUNOLOGY
- Technologies for MHC class I immunoproteomics
- (2010) Rieuwert Hoppes et al. Journal of Proteomics
- The safety and side effects of monoclonal antibodies
- (2010) Trevor T. Hansel et al. NATURE REVIEWS DRUG DISCOVERY
- The IMGT/HLA database
- (2010) J. Robinson et al. NUCLEIC ACIDS RESEARCH
- Allele frequency net: a database and online repository for immune gene frequencies in worldwide populations
- (2010) F. F. Gonzalez-Galarza et al. NUCLEIC ACIDS RESEARCH
- Database resources of the National Center for Biotechnology Information
- (2010) E. W. Sayers et al. NUCLEIC ACIDS RESEARCH
- Limitations of Ab Initio Predictions of Peptide Binding to MHC Class II Molecules
- (2010) Hao Zhang et al. PLoS One
- Towards Universal Structure-Based Prediction of Class II MHC Epitopes for Diverse Allotypes
- (2010) Andrew J. Bordner PLoS One
- Structural Properties of MHC Class II Ligands, Implications for the Prediction of MHC Class II Epitopes
- (2010) Kasper Winther Jørgensen et al. PLoS One
- Multimer technologies for detection and adoptive transfer of antigen-specific T cells
- (2009) Rosaely Casalegno-Garduño et al. CANCER IMMUNOLOGY IMMUNOTHERAPY
- The outermost N-terminal region of tapasin facilitates folding of major histocompatibility complex class I
- (2009) Gustav Roder et al. EUROPEAN JOURNAL OF IMMUNOLOGY
- In silicomethods for predicting T-cell epitopes: Dr Jekyll or Mr Hyde?
- (2009) Uthaman Gowthaman et al. Expert Review of Proteomics
- Elimination of Immunodominant Epitopes from Multispecific DNA-Based Vaccines Allows Induction of CD8 T Cells That Have a Striking Antiviral Potential
- (2009) P. Riedl et al. JOURNAL OF IMMUNOLOGY
- The Immune Epitope Database 2.0
- (2009) Randi Vita et al. NUCLEIC ACIDS RESEARCH
- Quantitative modeling of peptide binding to TAP using support vector machine
- (2009) Carmen M. Diez-Rivero et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- MHC II and the Endocytic Pathway: Regulation by Invariant Chain
- (2009) O. J. B. Landsverk et al. SCANDINAVIAN JOURNAL OF IMMUNOLOGY
- Enhancing Immunity Through Autophagy
- (2008) Christian Münz Annual Review of Immunology
- Accurate approximation method for prediction of class I MHC affinities for peptides of length 8, 10 and 11 using prediction tools trained on 9mers
- (2008) C. Lundegaard et al. BIOINFORMATICS
- Pan-specific MHC class I predictors: a benchmark of HLA class I pan-specific prediction methods
- (2008) Hao Zhang et al. BIOINFORMATICS
- HLA class I supertypes: a revised and updated classification
- (2008) John Sidney et al. BMC IMMUNOLOGY
- High-affinity human leucocyte antigen class I binding variola-derived peptides induce CD4+T cell responses more than 30 years post-vaccinia virus vaccination
- (2008) M. Wang et al. CLINICAL AND EXPERIMENTAL IMMUNOLOGY
- MHC motif viewer
- (2008) Nicolas Rapin et al. IMMUNOGENETICS
- NetMHCpan, a method for MHC class I binding prediction beyond humans
- (2008) Ilka Hoof et al. IMMUNOGENETICS
- The peptide-binding specificity of HLA-A*3001 demonstrates membership of the HLA-A3 supertype
- (2008) Kasper Lamberth et al. IMMUNOGENETICS
- Class II major histocompatibility complex tetramer staining: progress, problems, and prospects
- (2008) Sabrina S. Vollers et al. IMMUNOLOGY
- One-Pot, Mix-and-Read Peptide-MHC Tetramers
- (2008) Christian Leisner et al. PLoS One
- The Specificity and Polymorphism of the MHC Class I Prevents the Global Adaptation of HIV-1 to the Monomorphic Proteasome and TAP
- (2008) Boris Schmid et al. PLoS One
- A Systematic Assessment of MHC Class II Peptide Binding Predictions and Evaluation of a Consensus Approach
- (2008) Peng Wang et al. PLoS Computational Biology
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started