Computational analysis of high-throughput flow cytometry data

Update for the logicle data scale including operational code implementations

(2012) Wayne A. Moore et al.   CYTOMETRY PART A

flowPhyto: enabling automated analysis of microscopic algae from continuous flow cytometric data

(2011) F. Ribalet et al.   BIOINFORMATICS

Hyperspectral cytometry at the single-cell level using a 32-channel photodetector

(2011) Gérald Grégori et al.   CYTOMETRY PART A

High-Throughput Flow Cytometry

(2011) J. Paul Robinson et al.   Genetic Engineering & Biotechnology News

Phagocytosis and nitric oxide levels in rheumatic inflammatory states in elderly women

(2011) Iêda Maria Martinez Paino et al.   JOURNAL OF CLINICAL LABORATORY ANALYSIS

Extracting a cellular hierarchy from high-dimensional cytometry data with SPADE

(2011) Peng Qiu et al.   NATURE BIOTECHNOLOGY

Single-Cell Mass Cytometry of Differential Immune and Drug Responses Across a Human Hematopoietic Continuum

(2011) S. C. Bendall et al.   SCIENCE

Optimizing transformations for automated, high throughput analysis of flow cytometry data

(2010) Greg Finak et al.   BMC BIOINFORMATICS

Data reduction for spectral clustering to analyze high throughput flow cytometry data

(2010) Habil Zare et al.   BMC BIOINFORMATICS

Rapid cell population identification in flow cytometry data

(2010) Nima Aghaeepour et al.   CYTOMETRY PART A

Highly multiparametric analysis by mass cytometry

(2010) Olga Ornatsky et al.   JOURNAL OF IMMUNOLOGICAL METHODS

Phenotypic profiling of the human genome by time-lapse microscopy reveals cell division genes

(2010) Beate Neumann et al.   NATURE

CellCognition: time-resolved phenotype annotation in high-throughput live cell imaging

(2010) Michael Held et al.   NATURE METHODS

Mitochondrial function is altered in articular chondrocytes of an endemic osteoarthritis, Kashin–Beck disease

(2010) J.T. Liu et al.   OSTEOARTHRITIS AND CARTILAGE

Determining the distribution of probes between different subcellular locations through automated unmixing of subcellular patterns

(2010) T. Peng et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ultrahigh-throughput screening in drop-based microfluidics for directed evolution

(2010) J. J. Agresti et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

WebFlow: A Software Package for High-Throughput Analysis of Flow Cytometry Data

(2009) Mark M. Hammer et al.   ASSAY AND DRUG DEVELOPMENT TECHNOLOGIES

flowClust: a Bioconductor package for automated gating of flow cytometry data

(2009) Kenneth Lo et al.   BMC BIOINFORMATICS

flowCore: a Bioconductor package for high throughput flow cytometry

(2009) Florian Hahne et al.   BMC BIOINFORMATICS

Spectral measurements of large particles by flow cytometry

(2009) Dakota A. Watson et al.   CYTOMETRY PART A

Glutamine attenuates nitric oxide synthase expression and mitochondria membrane potential decrease in interleukin-1β-activated rat hepatocytes

(2009) Jun Lu et al.   EUROPEAN JOURNAL OF NUTRITION

Learning Signaling Network Structures with Sparsely Distributed Data

(2009) Karen Sachs et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Using flowViz to visualize flow cytometry data

(2008) D. Sarkar et al.   BIOINFORMATICS

Automated gating of flow cytometry data via robust model-based clustering

(2008) Kenneth Lo et al.   CYTOMETRY PART A

Cytometric fingerprinting: Quantitative characterization of multivariate distributions

(2008) Wade T. Rogers et al.   CYTOMETRY PART A

Development of an automated analysis system for data from flow cytometric intracellular cytokine staining assays from clinical vaccine trials

(2008) Nicholas Shulman et al.   CYTOMETRY PART A

Automated classification of bacterial particles in flow by multiangle scatter measurement and support vector machine classifier

(2007) Bartek Rajwa et al.   CYTOMETRY PART A