A phylomedicine approach to understanding the evolution of auditory sensory perception and disease in mammals

Human genomic disease variants: A neutral evolutionary explanation

(2012) J. T. Dudley et al.   GENOME RESEARCH

Evolutionary diagnosis method for variants in personal exomes

(2012) Sudhir Kumar et al.   NATURE METHODS

Parallel Evolution of Auditory Genes for Echolocation in Bats and Toothed Whales

(2012) Yong-Yi Shen et al.   PLoS Genetics

Detecting Individual Sites Subject to Episodic Diversifying Selection

(2012) Ben Murrell et al.   PLoS Genetics

Hereditary hearing loss: From human mutation to mechanism

(2011) Danielle R. Lenz et al.   HEARING RESEARCH

Parallel signatures of sequence evolution among hearing genes in echolocating mammals: an emerging model of genetic convergence

(2011) K T J Davies et al.   HEREDITY

The Voltage-Gated Potassium Channel Subfamily KQT Member 4 (KCNQ4) Displays Parallel Evolution in Echolocating Bats

(2011) Y. Liu et al.   MOLECULAR BIOLOGY AND EVOLUTION

Needles in stacks of needles: finding disease-causal variants in a wealth of genomic data

(2011) Gregory M. Cooper et al.   NATURE REVIEWS GENETICS

Predicting the functional impact of protein mutations: application to cancer genomics

(2011) Boris Reva et al.   NUCLEIC ACIDS RESEARCH

Parallel Evolution of KCNQ4 in Echolocating Bats

(2011) Zhen Liu et al.   PLoS One

Impacts of the Cretaceous Terrestrial Revolution and KPg Extinction on Mammal Diversification

(2011) R. W. Meredith et al.   SCIENCE

Phylomedicine: an evolutionary telescope to explore and diagnose the universe of disease mutations

(2011) Sudhir Kumar et al.   TRENDS IN GENETICS

UniProt Knowledgebase: a hub of integrated protein data

(2011) M. Magrane et al.   Database-The Journal of Biological Databases and Curation

Hearing loss: a common disorder caused by many rare alleles

(2010) Dorith Raviv et al.   Annals of the New York Academy of Sciences

Convergent sequence evolution between echolocating bats and dolphins

(2010) Yang Liu et al.   CURRENT BIOLOGY

Cetaceans on a Molecular Fast Track to Ultrasonic Hearing

(2010) Yang Liu et al.   CURRENT BIOLOGY

The hearing gene Prestin unites echolocating bats and whales

(2010) Ying Li et al.   CURRENT BIOLOGY

Genetics and pathological mechanisms of Usher syndrome

(2010) Denise Yan et al.   JOURNAL OF HUMAN GENETICS

A method and server for predicting damaging missense mutations

(2010) Ivan A Adzhubei et al.   NATURE METHODS

Hearing Impairment: A Panoply of Genes and Functions

(2010) Amiel A. Dror et al.   NEURON

Finding New Genes for Non-Syndromic Hearing Loss through an In Silico Prioritization Study

(2010) Matteo Accetturo et al.   PLoS One

Genome 10K: A Proposal to Obtain Whole-Genome Sequence for 10 000 Vertebrate Species

(2009)   JOURNAL OF HEREDITY

Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm

(2009) Prateek Kumar et al.   Nature Protocols

Hear, hear: the convergent evolution of echolocation in bats?

(2009) Emma C. Teeling   TRENDS IN ECOLOGY & EVOLUTION

MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences

(2008) S. Kumar et al.   BRIEFINGS IN BIOINFORMATICS

Quiet as a mouse: dissecting the molecular and genetic basis of hearing

(2008) Steve D. M. Brown et al.   NATURE REVIEWS GENETICS

UniPrime: a workflow-based platform for improved universal primer design

(2008) Michaël Bekaert et al.   NUCLEIC ACIDS RESEARCH

Ensembl 2009

(2008) T. J. P. Hubbard et al.   NUCLEIC ACIDS RESEARCH

The hearing gene Prestin reunites echolocating bats

(2008) G. Li et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Rapid Bootstrap Algorithm for the RAxML Web Servers

(2008) Alexandros Stamatakis et al.   SYSTEMATIC BIOLOGY