A SIMPLE MODEL EXPLAINS THE DYNAMICS OF PREFERENTIAL HOST SWITCHING AMONG MAMMAL RNA VIRUSES

Receptor-Binding Profiles of H7 Subtype Influenza Viruses in Different Host Species

(2012) Alexandra S. Gambaryan et al.   JOURNAL OF VIROLOGY

Evolutionary History and Phylodynamics of Influenza A and B Neuraminidase (NA) Genes Inferred from Large-Scale Sequence Analyses

(2012) Jianpeng Xu et al.   PLoS One

Phylogenomic datasets provide both precision and accuracy in estimating the timescale of placental mammal phylogeny

(2012) M. dos Reis et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Bats host major mammalian paramyxoviruses

(2012) Jan Felix Drexler et al.   Nature Communications

abc: an R package for approximate Bayesian computation (ABC)

(2012) Katalin Csilléry et al.   Methods in Ecology and Evolution

Genetic Characterization of Zika Virus Strains: Geographic Expansion of the Asian Lineage

(2012) Andrew D. Haddow et al.   PLoS Neglected Tropical Diseases

Yellow fever outbreak affecting Alouatta populations in southern Brazil (Rio Grande do Sul State), 2008-2009

(2011) Marco Antônio Barreto de Almeida et al.   AMERICAN JOURNAL OF PRIMATOLOGY

The Evolution of Endogenous Viral Elements

(2011) Edward C. Holmes   Cell Host & Microbe

Emergence of Divergent Zaire Ebola Virus Strains in Democratic Republic of the Congo in 2007 and 2008

(2011) G. Grard et al.   JOURNAL OF INFECTIOUS DISEASES

Genome-Scale Phylogeny of the Alphavirus Genus Suggests a Marine Origin

(2011) N. L. Forrester et al.   JOURNAL OF VIROLOGY

Purifying Selection Can Obscure the Ancient Age of Viral Lineages

(2011) Joel O. Wertheim et al.   MOLECULAR BIOLOGY AND EVOLUTION

Molecular Epidemiology and Evolution of Human Respiratory Syncytial Virus and Human Metapneumovirus

(2011) Eleanor R. Gaunt et al.   PLoS One

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(2011) Robert Poulin et al.   TRENDS IN PARASITOLOGY

Host Phylogeny Determines Viral Persistence and Replication in Novel Hosts

(2011) Ben Longdon et al.   PLoS Pathogens

Jane: a new tool for the cophylogeny reconstruction problem

(2010) Chris Conow et al.   Algorithms for Molecular Biology

Full genomic analysis of a simian SA11-like G3P[2] rotavirus strain isolated from an asymptomatic infant: Identification of novel VP1, VP6 and NSP4 genotypes

(2010) Souvik Ghosh et al.   INFECTION GENETICS AND EVOLUTION

The Evolutionary Dynamics of Bluetongue Virus

(2010) Giovanna Carpi et al.   JOURNAL OF MOLECULAR EVOLUTION

Identification of Simian Agent 10 as Human Parainfluenza Virus Type 3 Suggests Transmission of a Human Virus to an African Monkey

(2010) S. Kumar et al.   JOURNAL OF VIROLOGY

Genome-Scale Phylogenetic Analyses of Chikungunya Virus Reveal Independent Emergences of Recent Epidemics and Various Evolutionary Rates

(2010) S. M. Volk et al.   JOURNAL OF VIROLOGY

Phylogeography of West Nile Virus: from the Cradle of Evolution in Africa to Eurasia, Australia, and the Americas

(2010) F. J. May et al.   JOURNAL OF VIROLOGY

Overview: Japanese encephalitis

(2010) Usha Kant Misra et al.   PROGRESS IN NEUROBIOLOGY

Approximate Bayesian Computation (ABC) in practice

(2010) Katalin Csilléry et al.   TRENDS IN ECOLOGY & EVOLUTION

Re-emergence of bluetongue, African horse sickness, and other Orbivirus diseases

(2010) N. James MacLachlan et al.   VETERINARY RESEARCH

Origin of measles virus: divergence from rinderpest virus between the 11th and 12th centuries

(2010) Yuki Furuse et al.   Virology Journal

Management measures to control a feline leukemia virus outbreak in the endangered Iberian lynx

(2009) G. López et al.   ANIMAL CONSERVATION

Understanding the alphaviruses: Recent research on important emerging pathogens and progress towards their control

(2009) E.A. Gould et al.   ANTIVIRAL RESEARCH

Molecular evolution of dengue viruses: Contributions of phylogenetics to understanding the history and epidemiology of the preeminent arboviral disease

(2009) Scott C. Weaver et al.   INFECTION GENETICS AND EVOLUTION

Pathological manifestations of feline immunodeficiency virus (FIV) infection in wild African lions

(2009) Melody E. Roelke et al.   VIROLOGY

Dating the Age of the SIV Lineages That Gave Rise to HIV-1 and HIV-2

(2009) Joel O. Wertheim et al.   PLoS Computational Biology

Evolutionary History and Phylogeography of Human Viruses

(2008) Edward C. Holmes   Annual Review of Microbiology

Host–virus specificity of morbilliviruses predicted by structural modeling of the marine mammal SLAM, a receptor

(2008) Kazue Ohishi et al.   COMPARATIVE IMMUNOLOGY MICROBIOLOGY AND INFECTIOUS DISEASES

Pandemic Human Viruses Cause Decline of Endangered Great Apes

(2008) Sophie Köndgen et al.   CURRENT BIOLOGY

Evolution and dispersal of St. Louis encephalitis virus in the Americas

(2008) Albert J. Auguste et al.   INFECTION GENETICS AND EVOLUTION

Molecular characterization of medically important viruses of the genus Orthobunyavirus

(2008) A. J. Lambert et al.   JOURNAL OF GENERAL VIROLOGY

Global trends in emerging infectious diseases

(2008) Kate E. Jones et al.   NATURE

Phylogeny and geography predict pathogen community similarity in wild primates and humans

(2008) T. J. Davies et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The tale of a modern animal plague: Tracing the evolutionary history and determining the time-scale for foot and mouth disease virus

(2008) Damien C. Tully et al.   VIROLOGY

The Evolutionary Genetics and Emergence of Avian Influenza Viruses in Wild Birds

(2008) Vivien G. Dugan et al.   PLoS Pathogens