EVIDENCE FOR REPEATED LOSS OF SELECTIVE CONSTRAINT IN RHODOPSIN OF AMBLYOPSID CAVEFISHES (TELEOSTEI: AMBLYOPSIDAE)

Gene flow and population structure in the Mexican blind cavefish complex (Astyanax mexicanus)

(2012) Martina Bradic et al.   BMC EVOLUTIONARY BIOLOGY

Differential expression of rhodopsin and Exo-rhodopsin genes in the retina and pineal gland of olive flounder (Paralichthys olivaceus)

(2012) Hyun Suk Shin et al.   JOURNAL OF APPLIED ANIMAL RESEARCH

DELIMITING SPECIES USING MULTILOCUS DATA: DIAGNOSING CRYPTIC DIVERSITY IN THE SOUTHERN CAVEFISH, TYPHLICHTHYS SUBTERRANEUS (TELEOSTEI: AMBLYOPSIDAE)

(2011) Matthew L. Niemiller et al.   EVOLUTION

RE-EVOLUTION OF LOST MANDIBULAR TEETH IN FROGS AFTER MORE THAN 200 MILLION YEARS, AND RE-EVALUATING DOLLO'S LAW

(2011) John J. Wiens   EVOLUTION

CONVERGENCE, ADAPTATION, AND CONSTRAINT

(2011) Jonathan B. Losos   EVOLUTION

Molecular phylogeny and phylogeography of the Cuban cave-fishes of the genus Lucifuga: Evidence for cryptic allopatric diversity

(2011) Erik García-Machado et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Genome sequencing reveals insights into physiology and longevity of the naked mole rat

(2011) Eun Bae Kim et al.   NATURE

Homoplasy: From Detecting Pattern to Determining Process and Mechanism of Evolution

(2011) D. B. Wake et al.   SCIENCE

Function of Rhodopsin in Temperature Discrimination in Drosophila

(2011) W. L. Shen et al.   SCIENCE

Dispersal between Shallow and Abyssal Seas and Evolutionary Loss and Regain of Compound Eyes in Cylindroleberidid Ostracods: Conflicting Conclusions from Different Comparative Methods

(2011) Anna E. Syme et al.   SYSTEMATIC BIOLOGY

A novel rhodopsin-like gene expressed in zebrafish retina

(2011) JAMES M. MORROW et al.   VISUAL NEUROSCIENCE

Cave-Dwelling Fish Provide Clues to the Circadian Cycle

(2011) Robin Mejia   PLOS BIOLOGY

A Blind Circadian Clock in Cavefish Reveals that Opsins Mediate Peripheral Clock Photoreception

(2011) Nicola Cavallari et al.   PLOS BIOLOGY

Structure and Activation of the Visual Pigment Rhodopsin

(2010) Steven O. Smith   Annual Review of Biophysics

EVOLUTIONARY CONSTRAINT AND ECOLOGICAL CONSEQUENCES

(2010) Douglas J. Futuyma   EVOLUTION

CALIBRATING DIVERGENCE TIMES ON SPECIES TREES VERSUS GENE TREES: IMPLICATIONS FOR SPECIATION HISTORY OF APHELOCOMA JAYS

(2010) John E. McCormack et al.   EVOLUTION

Genes, modules and the evolution of cave fish

(2010) H Wilkens   HEREDITY

Parallel amino acid replacements in the rhodopsins of the rockfishes (Sebastes spp.) associated with shifts in habitat depth

(2010) A. SIVASUNDAR et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Regressive progression, progressive regression or neither? Phylogeny and evolution of the Percopsiformes (Teleostei, Paracanthopterygii)

(2010) Casey B. Dillman et al.   ZOOLOGICA SCRIPTA

Regressive Evolution inAstyanaxCavefish

(2009) William R. Jeffery   Annual Review of Genetics

Automated inference of molecular mechanisms of disease from amino acid substitutions

(2009) B. Li et al.   BIOINFORMATICS

Troglomorphism, trichobothriotaxy and typhlochactid phylogeny (Scorpiones, Chactoidea): more evidence that troglobitism is not an evolutionary dead-end

(2009) Lorenzo Prendini et al.   CLADISTICS

DID EGG-LAYING BOAS BREAK DOLLO'S LAW? PHYLOGENETIC EVIDENCE FOR REVERSAL TO OVIPARITY IN SAND BOAS (ERYX: BOIDAE)

(2009) Vincent J. Lynch et al.   EVOLUTION

Relaxed purifying selection of rhodopsin gene within a Chinese endemic cavefish genus Sinocyclocheilus (Pisces: Cypriniformes)

(2009) Zhiqiang Li et al.   HYDROBIOLOGIA

Distinct Evolutionary Patterns Between Two Duplicated Color Vision Genes Within Cyprinid Fishes

(2009) Zhiqiang Li et al.   JOURNAL OF MOLECULAR EVOLUTION

Vertebrate Rhodopsin Adaptation to Dim Light via Rapid Meta-II Intermediate Formation

(2009) T. Sugawara et al.   MOLECULAR BIOLOGY AND EVOLUTION

Bayesian Inference of Species Trees from Multilocus Data

(2009) J. Heled et al.   MOLECULAR BIOLOGY AND EVOLUTION

Molecular genetic variation and population structure in morphologically differentiated cave and surface populations of the freshwater amphipodGammarus minus

(2009) DAVID B. CARLINI et al.   MOLECULAR ECOLOGY

Rhodopsin Molecular Evolution in Mammals Inhabiting Low Light Environments

(2009) Huabin Zhao et al.   PLoS One

The evolution of color vision in nocturnal mammals

(2009) H. Zhao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A G protein-coupled receptor at work: the rhodopsin model

(2009) Klaus Peter Hofmann et al.   TRENDS IN BIOCHEMICAL SCIENCES

RATES AND PATTERNS IN THE EVOLUTION OF SNAKE-LIKE BODY FORM IN SQUAMATE REPTILES: EVIDENCE FOR REPEATED RE-EVOLUTION OF LOST DIGITS AND LONG-TERM PERSISTENCE OF INTERMEDIATE BODY FORMS

(2008) Matthew C. Brandley et al.   EVOLUTION

ON PHYLOGENETIC TESTS OF IRREVERSIBLE EVOLUTION

(2008) Emma E. Goldberg et al.   EVOLUTION

Recent divergence with gene flow in Tennessee cave salamanders (Plethodontidae:Gyrinophilus) inferred from gene genealogies

(2008) MATTHEW L. NIEMILLER et al.   MOLECULAR ECOLOGY

Reversing opinions on Dollo’s Law

(2008) Rachel Collin et al.   TRENDS IN ECOLOGY & EVOLUTION