Review
Immunology
Chen Dong
Summary: T lymphocytes play a key role in cellular immunity, with significant heterogeneity in CD4(+) T cells leading to the identification of various subsets with unique roles in immunity and pathology. Understanding cytokine regulation and function has provided innovative treatment options for many human diseases.
ANNUAL REVIEW OF IMMUNOLOGY, VOL 39
(2021)
Review
Immunology
Wenjing Xiang, Nanyan Yu, Aihua Lei, Xiaofang Li, Shui Tan, Lijun Huang, Zhou Zhou
Summary: Chlamydial infection causes clinically relevant diseases and significant morbidity in humans. Immune and inflammatory responses play crucial roles in both clearing the infection and causing pathology in host tissues. Cytokines produced in response to Chlamydia infection can regulate immune responses, but excessive production can lead to overreactive inflammation, affecting host and Chlamydia metabolism.
FRONTIERS IN IMMUNOLOGY
(2021)
Article
Immunology
Kusuma Sai Davuluri, Shoor Vir Singh, D. S. Chauhan
Summary: This study found that dysregulation of pro-inflammatory cytokines allows Mycobacterium tuberculosis to escape macrophage attack. Despite the protective immunity generated by T-cells and cytokines, the bacteria may spread to other organs due to inflammation induced by these immune components.
INDIAN JOURNAL OF MEDICAL RESEARCH
(2023)
Review
Biochemistry & Molecular Biology
Ji Won Han, Eui-Cheol Shin
Summary: Tissue-resident memory CD8(+) T (T-RM) cells, a population that resides in peripheral tissues and does not recirculate, have important implications for the treatment of chronic HBV infection. Liver T-RM cells have distinct characteristics compared to T cells in peripheral blood or other tissues, possibly due to the unique microenvironment of the liver. Liver T-RM cells can be a potential immunotherapeutic target for chronic HBV infection.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2021)
Review
Immunology
Can Lu, Huihui Chen, Chang Wang, Fei Yang, Jun Li, Hong Liu, Guochun Chen
Summary: TIM3 plays a crucial role in immune cell-mediated inflammatory responses and its overexpression has been observed in chronic kidney disease, although clinical evidence is still lacking.
FRONTIERS IN IMMUNOLOGY
(2022)
Article
Pharmacology & Pharmacy
Zhiwen Liu, Huihui Chen, Chongqing Tan, Jie Zha, Hong Liu, Guochun Chen
Summary: This study investigated the effects of long-term glucocorticoid (GC) exposure on circulating T cells in patients with primary glomerular diseases. The results showed that GCs altered the composition and correlation of circulating leukocytes and lymphocytes, as well as the subsets of CD4 + T cells. Long-term GC exposure exacerbated apoptosis of CD4 + T cells and cytokine storm during sepsis, which was mechanistically linked to the increase of CD3 + TIM3 + T cells. CD3 + TIM3 + T cells expressed high levels of multiple cytokine genes during infections and engagement of anti-TIM3 treatment enhanced the inflammatory activity of CD3 + T cells.
BIOCHEMICAL PHARMACOLOGY
(2023)
Article
Biochemistry & Molecular Biology
Jiong Yu, Xiaowei Shi, Jing Ma, Ronggao Chen, Siyi Dong, Sen Lu, Jian Wu, Cuilin Yan, Shusen Zheng, Lanjuan Li, Xiao Xu, Hongcui Cao
Summary: The study showed that baseline C-reactive protein (CRP) is independently associated with clinically significant bacterial infections 30 days post-liver transplantation (LT). The combination of CRP and organ failure number can effectively predict the risk of bacterial infection post-LT.
Review
Cell Biology
Ke-jia Wu, Qu-fei Qian, Jin-ren Zhou, Dong-lin Sun, Yun-fei Duan, Xi Zhu, Kurt Sartorius, Yun-jie Lu
Summary: The human liver plays crucial roles in synthesizing extracellular matrix (ECM) and regulating fibrogenesis for maintaining homeostasis. Chronic liver injury induces fibrogenesis due to the imbalance between ECM accumulation and fibrosis resolution. Liver diseases that cause fibrogenesis are associated with various risk factors, including hepatitis infection, schistosomiasis, alcohol, certain drugs, toxicants, diabetes, and obesity. Hepatic stellate cells (HSCs) activation, which generate and accumulate ECM, is a key event in liver fibrosis. The paper reviews the dual role of regulatory T-cells (Tregs) in liver fibrogenesis, including their promotion of immunosuppression and activation of fibrosis. Understanding the contradictory roles of Tregs in different immune microenvironments and molecular pathways is important for managing liver fibrosis.
CELL DEATH DISCOVERY
(2023)
Article
Dentistry, Oral Surgery & Medicine
C. Cantiga-Silva, C. Estrela, J. J. Segura-Egea, J. P. Azevedo, P. H. C. de Oliveira, C. B. M. Cardoso, T. N. Pinheiro, E. Ervolino, G. Sivieri-Araujo, L. T. A. Cintra
Summary: In the presence of liver fibrosis, rats with exposed pulps showed more intense inflammatory infiltrate, higher levels of pro-inflammatory cytokines, and increased periapical bone resorption compared to rats with apical periodontitis alone.
INTERNATIONAL ENDODONTIC JOURNAL
(2021)
Article
Immunology
Vincent D. Giacalone, Diego Moncada Giraldo, George L. Silva, Justin Hosten, Limin Peng, Lokesh Guglani, Rabindra Tirouvanziam
Summary: This study found that early-life pulmonary exacerbations (PEs) activate airway T cells and shift CF airway immunity towards neutrophil dominance.
FRONTIERS IN IMMUNOLOGY
(2023)
Review
Immunology
Beata Tokarz-Deptula, Joanna Palma, Lukasz Baraniecki, Michal Stosik, Roman Kolacz, Wieslaw Deptula
Summary: Platelets play a role in inflammation and infections by reacting with the endovascular environment and cells of the immune system. This role is influenced by biologically active substances present in platelet granules and EV structures.
FRONTIERS IN IMMUNOLOGY
(2021)
Article
Immunology
Di Wang, Yu Jiang, Yangzi Song, Yongqin Zeng, Cuilin Li, Xinyue Wang, Ying Liu, Jiang Xiao, Yaxian Kong, Hongxin Zhao
Summary: The study revealed that CD4(+) T cells in PLHIV exhibited enhanced secretion of proinflammatory cytokines and polyfunctionality due to HIV disease progression, while altered T-cell subsets led to discordant results in total and CD4(+) T-cell subsets.
JOURNAL OF INFLAMMATION RESEARCH
(2021)
Article
Gastroenterology & Hepatology
Pajau Vangay, Tonya Ward, Sarah Lucas, Lalit K. Beura, Dominique Sabas, Max Abramson, Lisa Till, Susan L. Hoops, Purna Kashyap, Ryan C. Hunter, David Masopust, Dan Knights
Summary: In this study, the differential effects of human gut microbiota from the United States and rural Thailand on the murine gut mucosa and immune system were assessed. The results suggest that Western-associated human gut microbes contribute to a pro-inflammatory immune response.
Article
Gastroenterology & Hepatology
Chenyang Han, Hongyan Pei, Yongjia Sheng, Jin Wang, Xiaohong Zhou, Wenyan Li, Shasha Wu, Yi Yang, Jian Sheng, Chenxi Cao
Summary: Our study focused on investigating the role and mechanism of double negative T cells (DNTs) in regulating Th9 cells differentiation in liver fibrosis. We found that DNTs could promote the activation of the TNFR2-STAT5-NF-κB pathway and the differentiation of Th9 cells, thus facilitating the progression of liver fibrosis. The use of IL-9 and TNF-a monoclonal antibodies (mAbs) inhibited the effect of DNTs and lowered the proportion of Th9 cells in tissues.
LIVER INTERNATIONAL
(2023)
Article
Mathematics, Interdisciplinary Applications
Naveen Sharma, Ram Singh, Carlo Cattani, Rachana Pathak
Summary: This study presents a mathematical model for the dynamics of T-cells and cytokines in dengue infection based on antiviral treatment, discussing the crucial role of cytokines in eliminating dengue infection and the impact of reproduction number on virus infection.
CHAOS SOLITONS & FRACTALS
(2021)
Article
Microbiology
Lydia Durant, Regis Stentz, Alistair Noble, Johanne Brooks, Nadezhda Gicheva, Durga Reddi, Matthew J. O'Connor, Lesley Hoyles, Anne L. McCartney, Ripple Man, E. Tobias Pring, Stella Dilke, Philip Hendy, Jonathan P. Segal, Dennis N. F. Lim, Ravi Misra, Ailsa L. Hart, Naila Arebi, Simon R. Carding, Stella C. Knight
Article
Gastroenterology & Hepatology
Rubina Aktar, Nabil Parkar, Regis Stentz, Lucas Baumard, Aimee Parker, Andrew Goldson, Arlaine Brion, Simon Carding, Ashley Blackshaw, Madusha Peiris
Article
Microbiology
Mohammad A. Tariq, Fiona Newberry, Rik Haagmans, Catherine Booth, Tom Wileman, Lesley Hoyles, Martha R. J. Clokie, James Ebdon, Simon R. Carding
FRONTIERS IN MICROBIOLOGY
(2020)
Article
Multidisciplinary Sciences
Bradlee L. Heckmann, Brett J. W. Teubner, Emilio Boada-Romero, Bart Tummers, Clifford Guy, Patrick Fitzgerald, Ulrike Mayer, Simon Carding, Stanislav S. Zakharenko, Thomas Wileman, Douglas R. Green
Article
Multidisciplinary Sciences
Inmaculada Serramito-Gomez, Emilio Boada-Romero, Raquel Villamuera, Alvaro Fernandez-Cabrera, Jose Luis Cedillo, Angela Martin-Regalado, Simon Carding, Uli Mayer, Penny P. Powell, Thomas Wileman, Irene Garcia-Higuera, Felipe X. Pimentel-Muinos
NATURE COMMUNICATIONS
(2020)
Article
Biochemistry & Molecular Biology
Yingxue Wang, Parul Sharma, Matthew Jefferson, Weijiao Zhang, Ben Bone, Anja Kipar, David Bitto, Janine L. Coombes, Timothy Pearson, Angela Man, Alex Zhekova, Yongping Bao, Ralph A. Tripp, Simon R. Carding, Yohei Yamauchi, Ulrike Mayer, Penny P. Powell, James P. Stewart, Thomas Wileman
Summary: The study demonstrates that non-canonical autophagy in airway epithelial cells is a novel innate defense mechanism that restricts influenza virus infection and reduces lethal inflammation.
Article
Microbiology
Mohammad A. Tariq, Simon R. Carding
Summary: Bacteroides fragilis is a common gut commensal bacterium and an important opportunistic pathogen. The circularly permuted B. fragilis bacteriophage vB_BfrS_NCTC has a complete genome sequence with 47,160 bp and 69 open reading frames.
MICROBIOLOGY RESOURCE ANNOUNCEMENTS
(2021)
Article
Virology
Shen-Yuan Hsieh, Mohammad A. Tariq, Andrea Telatin, Rebecca Ansorge, Evelien M. Adriaenssens, George M. Savva, Catherine Booth, Tom Wileman, Lesley Hoyles, Simon R. Carding
Summary: The human intestinal microbiota contains a diverse virome, mainly consisting of bacteriophages, with sequencing methods influencing the recovery of low-abundance viral genomes. PCR and PCR-free library preparation methods show differences in characterizing the faecal virome, affecting the alpha-diversity indices.
Article
Genetics & Heredity
Emily Jones, Regis Stentz, Andrea Telatin, George M. Savva, Catherine Booth, David Baker, Steven Rudder, Stella C. Knight, Alistair Noble, Simon R. Carding
Summary: The study found that there were no significant differences in the blood microbiota richness, diversity, or composition between patients with inflammatory bowel disease (IBD) and healthy controls, highlighting the issue of 'kit-ome' contamination in low-biomass studies. The results of the study provide a basis for further exploration of the potential use of blood microbiota profiling as a diagnostic aid in IBD.
Article
Microbiology
Lesley Hoyles, Matthew G. Pontifex, Ildefonso Rodriguez-Ramiro, M. Areeb Anis-Alavi, Khadija S. Jelane, Tom Snelling, Egle Solito, Sonia Fonseca, Ana L. Carvalho, Simon R. Carding, Michael Muller, Robert C. Glen, David Vauzour, Simon McArthur
Summary: The study shows that methylamine substances can directly affect the integrity of the blood-brain barrier in mammals by improving its function through regulation of tight junction proteins. Long-term exposure to trimethylamine N-oxide helps protect cognitive function, reducing astrocyte and microglial reactivity in specific brain regions.
Article
Microbiology
Steve A. James, Aimee Parker, Catherine Purse, Andrea Telatin, David Baker, Sandy Holmes, James Durham, Simon G. P. Funnell, Simon R. Carding
Summary: The intestinal mycobiota of cynomolgus macaque, Macaca fascicularis, is dominated by fungi from the Ascomycota phylum, with the budding yeast genus Kazachstania being the most abundant and the thermotolerant species K. pintolopesii being highly prevalent in both the small and large intestines. This is different from humans, whose intestinal mycobiota is characterized by other fungal genera such as Candida and Saccharomyces.
Article
Biochemistry & Molecular Biology
Katharine A. Seton, Marianne Defernez, Andrea Telatin, Sumeet K. Tiwari, George M. Savva, Antonietta Hayhoe, Alistair Noble, Ana L. S. de Carvalho-KoK, Steve A. James, Amolak Bansal, Thomas Wileman, Simon R. Carding
Summary: This study investigates the relationship between gut microbiome and immune function in patients with myalgic encephalomyelitis/chronic fatigue syndrome (ME/CFS). The results show immune dysfunction and reduced immune response to gut microbiota in these patients, providing a theoretical basis for further research on immune-microbiome interactions in ME/CFS patients.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2023)
Article
Microbiology
Stephen A. James, Sarah Phillips, Andrea Telatin, David Baker, Rebecca Ansorge, Paul Clarke, Lindsay J. Hall, Simon R. Carding
Article
Microbiology
Amisha Modasia, Aimee Parker, Emily Jones, Regis Stentz, Arlaine Brion, Andrew Goldson, Marianne Defernez, Tom Wileman, L. Ashley Blackshaw, Simon R. Carding
FRONTIERS IN MICROBIOLOGY
(2020)
Article
Biochemistry & Molecular Biology
A. Treveil, P. Sudhakar, Z. J. Matthews, T. Wrzesinski, E. J. Jones, J. Brooks, M. Olbei, I Hautefort, L. J. Hall, S. R. Carding, U. Mayer, P. P. Powell, T. Wileman, F. Di Palma, W. Haerty, T. Korcsmaros