Introducing insoluble wheat bran as a gut microbiota niche in an in vitro dynamic gut model stimulates propionate and butyrate production and induces colon region specific shifts in the luminal and mucosal microbial community
出版年份 2018 全文链接
标题
Introducing insoluble wheat bran as a gut microbiota niche in an in vitro
dynamic gut model stimulates propionate and butyrate production and induces colon region specific shifts in the luminal and mucosal microbial community
作者
关键词
-
出版物
ENVIRONMENTAL MICROBIOLOGY
Volume 20, Issue 9, Pages 3406-3426
出版商
Wiley
发表日期
2018-08-21
DOI
10.1111/1462-2920.14381
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Inter-individual differences determine the outcome of wheat bran colonization by the human gut microbiome
- (2017) Kim De Paepe et al. ENVIRONMENTAL MICROBIOLOGY
- Complex heatmaps reveal patterns and correlations in multidimensional genomic data
- (2016) Zuguang Gu et al. BIOINFORMATICS
- Modulation of the human gut microbiota by dietary fibres occurs at the species level
- (2016) Wing Sun Faith Chung et al. BMC BIOLOGY
- Wheat bran promotes enrichment within the human colonic microbiota of butyrate-producing bacteria that release ferulic acid
- (2016) Sylvia H. Duncan et al. ENVIRONMENTAL MICROBIOLOGY
- Morganella morganii, a non-negligent opportunistic pathogen
- (2016) Hui Liu et al. INTERNATIONAL JOURNAL OF INFECTIOUS DISEASES
- Population-level analysis of gut microbiome variation
- (2016) Gwen Falony et al. SCIENCE
- Interpreting Prevotella and Bacteroides as biomarkers of diet and lifestyle
- (2016) Anastassia Gorvitovskaia et al. Microbiome
- Species–function relationships shape ecological properties of the human gut microbiome
- (2016) Sara Vieira-Silva et al. Nature Microbiology
- Minor revision to V4 region SSU rRNA 806R gene primer greatly increases detection of SAR11 bacterioplankton
- (2015) A Apprill et al. AQUATIC MICROBIAL ECOLOGY
- dendextend: an R package for visualizing, adjusting and comparing trees of hierarchical clustering
- (2015) Tal Galili BIOINFORMATICS
- Every base matters: assessing small subunit rRNA primers for marine microbiomes with mock communities, time series and global field samples
- (2015) Alma E. Parada et al. ENVIRONMENTAL MICROBIOLOGY
- Gut biogeography of the bacterial microbiota
- (2015) Gregory P. Donaldson et al. NATURE REVIEWS MICROBIOLOGY
- Genetic determinants of in vivo fitness and diet responsiveness in multiple human gut Bacteroides
- (2015) M. Wu et al. SCIENCE
- Glycan complexity dictates microbial resource allocation in the large intestine
- (2015) Artur Rogowski et al. Nature Communications
- Microbial Degradation of Whole-Grain Complex Carbohydrates and Impact on Short-Chain Fatty Acids and Health
- (2015) Knud Erik Bach Knudsen Advances in Nutrition
- Microbial biofilms and the human intestinal microbiome
- (2015) Willem M de Vos npj Biofilms and Microbiomes
- The contribution of wheat to human diet and health
- (2015) Peter R. Shewry et al. Food and Energy Security
- Biomass Utilization by Gut Microbiomes
- (2014) Bryan A. White et al. Annual Review of Microbiology
- Impact of diet and individual variation on intestinal microbiota composition and fermentation products in obese men
- (2014) Anne Salonen et al. ISME Journal
- An integrated catalog of reference genes in the human gut microbiome
- (2014) Junhua Li et al. NATURE BIOTECHNOLOGY
- Gut Microbiota Signatures Predict Host and Microbiota Responses to Dietary Interventions in Obese Individuals
- (2014) Katri Korpela et al. PLoS One
- Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible
- (2014) Paul J. McMurdie et al. PLoS Computational Biology
- Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform
- (2013) James J. Kozich et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Experimental models of the gut microbiome
- (2013) Koen Venema et al. BEST PRACTICE & RESEARCH IN CLINICAL GASTROENTEROLOGY
- Different Human Gut Models Reveal the Distinct Fermentation Patterns of Arabinoxylan versus Inulin
- (2013) Pieter Van den Abbeele et al. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY
- 'Blooming' in the gut: how dysbiosis might contribute to pathogen evolution
- (2013) Bärbel Stecher et al. NATURE REVIEWS MICROBIOLOGY
- The abundance and variety of carbohydrate-active enzymes in the human gut microbiota
- (2013) Abdessamad El Kaoutari et al. NATURE REVIEWS MICROBIOLOGY
- Ribosomal Database Project: data and tools for high throughput rRNA analysis
- (2013) James R. Cole et al. NUCLEIC ACIDS RESEARCH
- A Comparison of Methods for Clustering 16S rRNA Sequences into OTUs
- (2013) Wei Chen et al. PLoS One
- Effects of Diet on Resource Utilization by a Model Human Gut Microbiota Containing Bacteroides cellulosilyticus WH2, a Symbiont with an Extensive Glycobiome
- (2013) Nathan P. McNulty et al. PLOS BIOLOGY
- Intestinal colonization resistance
- (2012) Trevor D. Lawley et al. IMMUNOLOGY
- Microbes inside—from diversity to function: the case of Akkermansia
- (2012) Clara Belzer et al. ISME Journal
- Butyrate-producing Clostridium cluster XIVa species specifically colonize mucins in an in vitro gut model
- (2012) Pieter Van den Abbeele et al. ISME Journal
- Diversity, stability and resilience of the human gut microbiota
- (2012) Catherine A. Lozupone et al. NATURE
- The role of the gut microbiota in nutrition and health
- (2012) Harry J. Flint et al. Nature Reviews Gastroenterology & Hepatology
- How glycan metabolism shapes the human gut microbiota
- (2012) Nicole M. Koropatkin et al. NATURE REVIEWS MICROBIOLOGY
- The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
- (2012) Christian Quast et al. NUCLEIC ACIDS RESEARCH
- Intestinal luminal nitrogen metabolism: Role of the gut microbiota and consequences for the host
- (2012) Anne-Marie Davila et al. PHARMACOLOGICAL RESEARCH
- How Do Bacteria Know They Are on a Surface and Regulate Their Response to an Adhering State?
- (2012) Henk J. Busscher et al. PLoS Pathogens
- Functional Analysis of Lactobacillus rhamnosus GG Pili in Relation to Adhesion and Immunomodulatory Interactions with Intestinal Epithelial Cells
- (2011) Sarah Lebeer et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Assessing and Improving Methods Used in Operational Taxonomic Unit-Based Approaches for 16S rRNA Gene Sequence Analysis
- (2011) Patrick D. Schloss et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- UCHIME improves sensitivity and speed of chimera detection
- (2011) Robert C. Edgar et al. BIOINFORMATICS
- High-throughput clone library analysis of the mucosa-associated microbiota reveals dysbiosis and differences between inflamed and non-inflamed regions of the intestine in inflammatory bowel disease
- (2011) Alan W Walker et al. BMC MICROBIOLOGY
- Composition and functional role of the mucus layers in the intestine
- (2011) Malin E. V. Johansson et al. CELLULAR AND MOLECULAR LIFE SCIENCES
- Human distal gut microbiome
- (2011) Julian R. Marchesi ENVIRONMENTAL MICROBIOLOGY
- Arabinoxylans and inulin differentially modulate the mucosal and luminal gut microbiota and mucin-degradation in humanized rats
- (2011) Pieter Van den Abbeele et al. ENVIRONMENTAL MICROBIOLOGY
- Secondary structure information does not improve OTU assignment for partial 16s rRNA sequences
- (2011) Xiaoyu Wang et al. ISME Journal
- In Vitro Fermentation of Bacterial Cellulose Composites as Model Dietary Fibers
- (2011) Deirdre Mikkelsen et al. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY
- Genetic analysis and morphological identification of pilus-like structures in members of the genus Bifidobacterium
- (2011) Elena Foroni et al. Microbial Cell Factories
- Relevance of protein fermentation to gut health
- (2011) Karen Windey et al. MOLECULAR NUTRITION & FOOD RESEARCH
- Enterotypes of the human gut microbiome
- (2011) Manimozhiyan Arumugam et al. NATURE
- Incorporating a mucosal environment in a dynamic gut model results in a more representative colonization by lactobacilli
- (2011) Pieter Van den Abbeele et al. Microbial Biotechnology
- The Human Gut Microbiome: Ecology and Recent Evolutionary Changes
- (2010) Jens Walter et al. Annual Review of Microbiology
- Microbial Community Development in a Dynamic Gut Model Is Reproducible, Colon Region Specific, and Selective for Bacteroidetes and Clostridium Cluster IX
- (2010) P. Van den Abbeele et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Spatial organization of intestinal microbiota in the mouse ascending colon
- (2010) Gerardo M Nava et al. ISME Journal
- Dominant and diet-responsive groups of bacteria within the human colonic microbiota
- (2010) Alan W Walker et al. ISME Journal
- Xylan degradation, a metabolic property shared by rumen and human colonic Bacteroidetes
- (2010) Dylan Dodd et al. MOLECULAR MICROBIOLOGY
- Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample
- (2010) J. G. Caporaso et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Testing the significance of canonical axes in redundancy analysis
- (2010) Pierre Legendre et al. Methods in Ecology and Evolution
- Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
- (2009) P. D. Schloss et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- In vitro model to study the modulation of the mucin-adhered bacterial community
- (2009) Pieter Van den Abbeele et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Development and application of the human intestinal tract chip, a phylogenetic microarray: analysis of universally conserved phylotypes in the abundant microbiota of young and elderly adults
- (2009) Mirjana Rajilić-Stojanović et al. ENVIRONMENTAL MICROBIOLOGY
- The role of pH in determining the species composition of the human colonic microbiota
- (2009) Sylvia H. Duncan et al. ENVIRONMENTAL MICROBIOLOGY
- Comparative genomic analysis of Lactobacillus rhamnosus GG reveals pili containing a human- mucus binding protein
- (2009) M. Kankainen et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The species composition of the human intestinal microbiota differs between particle-associated and liquid phase communities
- (2008) Alan W. Walker et al. ENVIRONMENTAL MICROBIOLOGY
- Biostructure of Fecal Microbiota in Healthy Subjects and Patients With Chronic Idiopathic Diarrhea
- (2008) Alexander Swidsinski et al. GASTROENTEROLOGY
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now