Crop monoculture rather than agriculture reduces the spatial turnover of soil bacterial communities at a regional scale

An Entomologist Guide to Demystify Pseudoreplication: Data Analysis of Field Studies With Design Constraints

(2015) Luis Fernando Chaves et al.   JOURNAL OF MEDICAL ENTOMOLOGY

The influence of soil properties on denitrifying bacterial communities and denitrification potential in no-till production farms under contrasting management in the Argentinean Pampas

(2013) Silvina M. Rosa et al.   APPLIED SOIL ECOLOGY

Temporal variability in soil microbial communities across land-use types

(2013) Christian L Lauber et al.   ISME Journal

Changes of Soil Bacterial Diversity as a Consequence of Agricultural Land Use in a Semi-Arid Ecosystem

(2013) Guo-Chun Ding et al.   PLoS One

Pesticides reduce regional biodiversity of stream invertebrates

(2013) M. A. Beketov et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Several scales of biodiversity affect ecosystem multifunctionality

(2013) J. R. Pasari et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Random Sampling Process Leads to Overestimation of  -Diversity of Microbial Communities

(2013) J. Zhou et al.   mBio

PCR Biases Distort Bacterial and Archaeal Community Structure in Pyrosequencing Datasets

(2012) Ameet J. Pinto et al.   PLoS One

Bacterial Indicator of Agricultural Management for Soil under No-Till Crop Production

(2012) Eva L. M. Figuerola et al.   PLoS One

Conversion of the Amazon rainforest to agriculture results in biotic homogenization of soil bacterial communities

(2012) J. L. M. Rodrigues et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Which sequencing depth is sufficient to describe patterns in bacterial α- and β-diversity?

(2012) Daniel Lundin et al.   Environmental Microbiology Reports

Preventing biotic homogenization of farmland bird communities: The role of High Nature Value farmland

(2011) Aggeliki Doxa et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

Reproducibility and quantitation of amplicon sequencing-based detection

(2011) Jizhong Zhou et al.   ISME Journal

Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients

(2011) Noah Fierer et al.   ISME Journal

Using network analysis to explore co-occurrence patterns in soil microbial communities

(2011) Albert Barberán et al.   ISME Journal

Disentangling the importance of ecological niches from stochastic processes across scales

(2011) J. M. Chase et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Reducing the Effects of PCR Amplification and Sequencing Artifacts on 16S rRNA-Based Studies

(2011) Patrick D. Schloss et al.   PLoS One

Bacterial community comparisons by taxonomy-supervised analysis independent of sequence alignment and clustering

(2011) W. J. Sul et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Local and regional factors influencing bacterial community assembly

(2011) Eva S. Lindström et al.   Environmental Microbiology Reports

Phylogenetic and Multivariate Analyses To Determine the Effects of Different Tillage and Residue Management Practices on Soil Bacterial Communities

(2010) J. A. Ceja-Navarro et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

UniFrac: an effective distance metric for microbial community comparison

(2010) Catherine Lozupone et al.   ISME Journal

Homogenization of lepidopteran communities in intensively cultivated agricultural landscapes

(2010) Johan Ekroos et al.   JOURNAL OF APPLIED ECOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

The ecological coherence of high bacterial taxonomic ranks

(2010) Laurent Philippot et al.   NATURE REVIEWS MICROBIOLOGY

Comparison of two next-generation sequencing technologies for resolving highly complex microbiota composition using tandem variable 16S rRNA gene regions

(2010) Marcus J. Claesson et al.   NUCLEIC ACIDS RESEARCH

Negative effects of no-till on soil macrofauna and litter decomposition in Argentina as compared with natural grasslands

(2010) Anahí Domínguez et al.   SOIL & TILLAGE RESEARCH

Changes in land use alter the structure of bacterial communities in Western Amazon soils

(2009) Ederson da C Jesus et al.   ISME Journal

Long-Term Phosphorus Fertilization Impacts Soil Fungal and Bacterial Diversity but not AM Fungal Community in Alfalfa

(2009) M. S. Beauregard et al.   MICROBIAL ECOLOGY

Soil microbial community, C, N, and P responses to long-term tillage and crop rotation

(2009) Ma. del Carmen A. González-Chávez et al.   SOIL & TILLAGE RESEARCH

LANDSCAPE CONSTRAINTS ON FUNCTIONAL DIVERSITY OF BIRDS AND INSECTS IN TROPICAL AGROECOSYSTEMS

(2008) Teja Tscharntke et al.   ECOLOGY

How does habitat diversity affect the species–area relationship?

(2008) Athanasios S. Kallimanis et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Resistance, resilience, and redundancy in microbial communities

(2008) S. D. Allison et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA