nifHpyrosequencing reveals the potential for location-specific soil chemistry to influence N2-fixing community dynamics

Soil metagenomics reveals differences under conventional and no-tillage with crop rotation or succession

(2013) Renata Carolini Souza et al.   APPLIED SOIL ECOLOGY

Analysis of organic fractions as indicators of soil quality under natural and cultivated systems

(2013) Matias E. Duval et al.   SOIL & TILLAGE RESEARCH

Phylogenetic diversity of nitrogen-fixing bacteria and the nifH gene from mangrove rhizosphere soil

(2012) Jianyin Liu et al.   CANADIAN JOURNAL OF MICROBIOLOGY

Diverse and highly active diazotrophic assemblages inhabit ephemerally wetted soils of the Antarctic Dry Valleys

(2012) Thomas D. Niederberger et al.   FEMS MICROBIOLOGY ECOLOGY

Unlocking the potential of metagenomics through replicated experimental design

(2012) Rob Knight et al.   NATURE BIOTECHNOLOGY

PCR Biases Distort Bacterial and Archaeal Community Structure in Pyrosequencing Datasets

(2012) Ameet J. Pinto et al.   PLoS One

Bacterial Indicator of Agricultural Management for Soil under No-Till Crop Production

(2012) Eva L. M. Figuerola et al.   PLoS One

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

A global census of nitrogenase diversity

(2011) John Christian Gaby et al.   ENVIRONMENTAL MICROBIOLOGY

Reproducibility and quantitation of amplicon sequencing-based detection

(2011) Jizhong Zhou et al.   ISME Journal

Nitrogenase Gene Amplicons from Global Marine Surface Waters Are Dominated by Genes of Non-Cyanobacteria

(2011) Hanna Farnelid et al.   PLoS One

Reducing the Effects of PCR Amplification and Sequencing Artifacts on 16S rRNA-Based Studies

(2011) Patrick D. Schloss et al.   PLoS One

Abundance and diversity of nitrogen-fixing bacteria in rhizosphere and bulk paddy soil under different duration of organic management

(2011) Wang Shu et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

CD-HIT Suite: a web server for clustering and comparing biological sequences

(2010) Ying Huang et al.   BIOINFORMATICS

Ecological and environmental footprint of 50 years of agricultural expansion in Argentina

(2010) ERNESTO F. VIGLIZZO et al.   GLOBAL CHANGE BIOLOGY

Tillage and drainage impact on soil quality: II. Tensile strength of aggregates, moisture retention and water infiltration

(2009) Muhammad Abid et al.   SOIL & TILLAGE RESEARCH

Evidence for the functional significance of diazotroph community structure in soil

(2008) Shi-Fang Hsu et al.   ISME Journal

High Diversity of Diazotrophs in the Forefield of a Receding Alpine Glacier

(2008) Laurence Duc et al.   MICROBIAL ECOLOGY

15N2–DNA–stable isotope probing of diazotrophic methanotrophs in soil

(2007) Daniel H. Buckley et al.   SOIL BIOLOGY & BIOCHEMISTRY