Analysis of two marine metagenomes reveals the diversity of plasmids in oceanic environments

Selection in Coastal Synechococcus (Cyanobacteria) Populations Evaluated from Environmental Metagenomes

(2011) Vera Tai et al.   PLoS One

Comparative metagenomic analysis of plasmid encoded functions in the human gut microbiome

(2010) Brian V Jones et al.   BMC GENOMICS

Ab initio gene identification in metagenomic sequences

(2010) Wenhan Zhu et al.   NUCLEIC ACIDS RESEARCH

Diversity and evolution ofrepABCtype plasmids inRhodobacterales

(2009) Jörn Petersen et al.   ENVIRONMENTAL MICROBIOLOGY

Temporal variation of Synechococcus clades at a coastal Pacific Ocean monitoring site

(2009) Vera Tai et al.   ISME Journal

Diverse circovirus-like genome architectures revealed by environmental metagenomics

(2009) K. Rosario et al.   JOURNAL OF GENERAL VIROLOGY

Variety--the Splice of Life--in Microbial Communities

(2009) J. F. Banfield et al.   SCIENCE

CoastalSynechococcusmetagenome reveals major roles for horizontal gene transfer and plasmids in population diversity

(2008) B. Palenik et al.   ENVIRONMENTAL MICROBIOLOGY

Comparative Genome Sequence Analysis of Multidrug-Resistant Acinetobacter baumannii

(2008) M. D. Adams et al.   JOURNAL OF BACTERIOLOGY

A Novel Family of Sequence-specific Endoribonucleases Associated with the Clustered Regularly Interspaced Short Palindromic Repeats

(2008) Natalia Beloglazova et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Genetic diversity and composition of a plasmid metagenome from a wastewater treatment plant

(2008) Andreas Schlüter et al.   JOURNAL OF BIOTECHNOLOGY

CDD: specific functional annotation with the Conserved Domain Database

(2008) A. Marchler-Bauer et al.   NUCLEIC ACIDS RESEARCH

The Sorcerer II Global Ocean Sampling Expedition: Metagenomic Characterization of Viruses within Aquatic Microbial Samples

(2008) Shannon J. Williamson et al.   PLoS One

Comparative Analysis of Acinetobacters: Three Genomes for Three Lifestyles

(2008) David Vallenet et al.   PLoS One

Virus Population Dynamics and Acquired Virus Resistance in Natural Microbial Communities

(2008) A. F. Andersson et al.   SCIENCE