4.5 Article

Using Information Theory to Determine Optimum Pixel Size and Shape for Ecological Studies: Aggregating Land Surface Characteristics in Arctic Ecosystems

期刊

ECOSYSTEMS
卷 12, 期 4, 页码 574-589

出版社

SPRINGER
DOI: 10.1007/s10021-009-9243-7

关键词

information content; Kullback-Liebler divergence; leaf area index; Shannon entropy; spatial averaging; triangulated irregular network; tundra; upscaling

类别

资金

  1. US National Science Foundation [OPP-0096523, OPP-0352897, DEB-0087046, DEB-00895825]
  2. University of Edinburgh
  3. Natural Environment Research Council
  4. NERC [NE/D005795/1] Funding Source: UKRI
  5. Natural Environment Research Council [ceh010023, NE/D005795/1] Funding Source: researchfish

向作者/读者索取更多资源

Quantifying vegetation structure and function is critical for modeling ecological processes, and an emerging challenge is to apply models at multiple spatial scales. Land surface heterogeneity is commonly characterized using rectangular pixels, whose length scale reflects that of remote sensing measurements or ecological models rather than the spatial scales at which vegetation structure and function varies. We investigated the 'optimum' pixel size and shape for averaging leaf area index (LAI) measurements in relatively large (85 m(2) estimates on a 600 x 600-m(2) grid) and small (0.04 m(2) measurements on a 40 x 40-m(2) grid) patches of sub-Arctic tundra near Abisko, Sweden. We define the optimum spatial averaging operator as that which preserves the information content (IC) of measured LAI, as quantified by the normalized Shannon entropy (E (S,n)) and Kullback-Leibler divergence (D (KL)), with the minimum number of pixels. Based on our criterion, networks of Voronoi polygons created from triangulated irregular networks conditioned on hydrologic and topographic indices are often superior to rectangular shapes for averaging LAI at some, frequently larger, spatial scales. In order to demonstrate the importance of information preservation when upscaling, we apply a simple, validated ecosystem carbon flux model at the landscape level before and after spatial averaging of land surface characteristics. Aggregation errors are minimal due to the approximately linear relationship between flux and LAI, but large errors of approximately 45% accrue if the normalized difference vegetation index (NDVI) is averaged without preserving IC before conversion to LAI due to the nonlinear NDVI-LAI transfer function.

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.5
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

Article Agronomy

Combining Process Modelling and LAI Observations to Diagnose Winter Wheat Nitrogen Status and Forecast Yield

Andrew Revill, Vasileios Myrgiotis, Anna Florence, Stephen Hoad, Robert Rees, Alasdair MacArthur, Mathew Williams

Summary: Climate, nitrogen, and leaf area index are key factors affecting crop yield. By combining climate and LAI data with a model, researchers successfully estimated leaf nitrogen content and crop yield. The model calibration showed accurate results, providing a valuable tool for crop studies.

AGRONOMY-BASEL (2021)

Article Environmental Sciences

Using satellite estimates of aboveground biomass to assess carbon stocks in a mixed-management, semi-deciduous tropical forest in the Yucatan Peninsula

Stephanie P. George-Chacon, David T. Milodowski, Juan Manuel Dupuy, Jean-Francois Mas, Mathew Williams, Miguel Angel Castillo-Santiago, Jose Luis Hernandez-Stefanoni

Summary: Machine learning was successfully used to upscale forest aboveground biomass from field data to remote sensing data, while uncertainty was effectively propagated and the relative contributions of each sensor were explored. Sentinel-2 outperformed ALOS-PALSAR in the model performance, but the combination of both sensors provided the best fit.

GEOCARTO INTERNATIONAL (2022)

Article Geosciences, Multidisciplinary

It's the Heat and the Humidity: The Complementary Roles of Temperature and Specific Humidity to Recent Changes in the Energy Content of the Near-Surface Atmosphere

P. C. Stoy, J. Roh, G. T. Bromley

Summary: Global climate change refers to a change in the planetary energy balance, in which specific humidity plays a critical role. The study found that from 1980 to 2014, the change in global near-surface air temperature (T-a) is influenced not only by the energy change due to T-a (E-T), but also by the energy change due to specific humidity (E-SH).

GEOPHYSICAL RESEARCH LETTERS (2022)

Article Biodiversity Conservation

Uncovering the critical soil moisture thresholds of plant water stress for European ecosystems

Zheng Fu, Philippe Ciais, David Makowski, Ana Bastos, Paul C. Stoy, Andreas Ibrom, Alexander Knohl, Mirco Migliavacca, Matthias Cuntz, Ladislav Sigut, Matthias Peichl, Denis Loustau, Tarek S. El-Madany, Nina Buchmann, Mana Gharun, Ivan Janssens, Christian Markwitz, Thomas Gruenwald, Corinna Rebmann, Meelis Molder, Andrej Varlagin, Ivan Mammarella, Pasi Kolari, Christian Bernhofer, Michal Heliasz, Caroline Vincke, Andrea Pitacco, Edoardo Cremonese, Lenka Foltynova, Jean-Pierre Wigneron

Summary: Understanding the critical soil moisture threshold is crucial for evaluating drought impacts and improving climate models. In Europe, estimating this threshold is challenging, but analyzing relationships between evaporative fraction, vapor pressure deficit, and gross primary production can provide valuable insights. Variations in surface energy partitioning and sensitivities to soil moisture were observed across different vegetation types.

GLOBAL CHANGE BIOLOGY (2022)

Article Multidisciplinary Sciences

The spatial variability of NDVI within a wheat field: Information content and implications for yield and grain protein monitoring

Paul C. Stoy, Anam M. Khan, Aaron Wipf, Nick Silverman, Scott L. Powell

Summary: This study investigated the variability of wheat yield and grain protein content at different spatial scales, predicting these indicators using UAV and Landsat. It concluded the information content and variance change of NDVI observations at different scales.

PLOS ONE (2022)

Article Environmental Sciences

Challenges in Scaling Up Greenhouse Gas Fluxes: Experience From the UK Greenhouse Gas Emissions and Feedbacks Program

Peter Levy, Robert Clement, Nick Cowan, Ben Keane, Vasilis Myrgiotis, Marcel van Oijen, T. Luke Smallman, Sylvia Toet, Mathew Williams

Summary: The role of greenhouse gases in global climate change and the verification of mitigation measures require accurate estimation and quantification of emissions at large and long time scales. However, translating short-term observations into long-term estimates poses a challenge. This review explores approaches such as instrumentation developments, geostatistical methods, more rigorous statistical methods, and the use of remote sensing data to address this problem.

JOURNAL OF GEOPHYSICAL RESEARCH-BIOGEOSCIENCES (2022)

Article Environmental Sciences

Climate Sensitivities of Carbon Turnover Times in Soil and Vegetation: Understanding Their Effects on Forest Carbon Sequestration

Rong Ge, Honglin He, Li Zhang, Xiaoli Ren, Mathew Williams, Guirui Yu, T. Luke Smallman, Tao Zhou, Pan Li, Zongqiang Xie, Silong Wang, Huimin Wang, Guoyi Zhou, Qibin Zhang, Anzhi Wang, Zexin Fan, Yiping Zhang, Weijun Shen, Huajun Yin, Luxiang Lin

Summary: The high uncertainty associated with the response of terrestrial carbon (C) cycle to climate is dominated by the ecosystem C turnover time. The differences in climate sensitivities of turnover time in major biomass and soil pools are poorly understood, and their effects on vegetation and soil C sequestration under climate change remain unclear. This study conducted observations and model-data fusion in Chinese forests to explore the relationship between climate and turnover time. It was found that both vegetation and soil turnover time decreased with increasing temperature and precipitation, and soil turnover time was more sensitive than vegetation turnover time. The smaller balance between soil C input and exit rate under warm and humid conditions suggests a relatively lower contribution from soil C sequestration.

JOURNAL OF GEOPHYSICAL RESEARCH-BIOGEOSCIENCES (2022)

Article Environmental Sciences

The Diurnal Dynamics of Gross Primary Productivity Using Observations From the Advanced Baseline Imager on the Geostationary Operational Environmental Satellite-R Series at an Oak Savanna Ecosystem

A. M. Khan, P. C. Stoy, J. Joiner, D. Baldocchi, J. Verfaillie, M. Chen, J. A. Otkin

Summary: This study used satellite data to explore the diurnal variability of GPP and its relationship with environmental conditions. By comparing three methods, it was found that the LRC-NIRvP model provided relatively accurate estimates of GPP and revealed the characteristic of the peak of GPP shifting towards the morning hours during summer in relation to incoming solar radiation.

JOURNAL OF GEOPHYSICAL RESEARCH-BIOGEOSCIENCES (2022)

Article Environmental Sciences

Ecosystem Gross Primary Productivity After Autumn Snowfall and Melt Events in a Mountain Meadow

P. C. Stoy, A. M. Khan, K. Van Dorsten, P. Sauer, T. Weaver, E. N. J. Brookshire

Summary: Vegetation productivity is increasing in the U.S. Northern Great Plains but decreasing in nearby Northern Rocky Mountain grasslands due to increased aridity. It is unclear if the decrease in productivity can be offset by late-season green-ups after precipitation events.

JOURNAL OF GEOPHYSICAL RESEARCH-BIOGEOSCIENCES (2022)

Article Agronomy

Climate mitigation potential and soil microbial response of cyanobacteria-fertilized bioenergy crops in a cool semi-arid cropland

Justin D. Gay, Hannah M. Goemann, Bryce Currey, Paul C. Stoy, Jesper Riis Christiansen, Perry R. Miller, Benjamin Poulter, Brent M. Peyton, E. N. Jack Brookshire

Summary: This study examines the effects of different fertilizer strategies on biomass, greenhouse gas fluxes, soil organic carbon, and soil microbiome of perennial grasses in a semi-arid agroecosystem. The results show that the C3 grass had higher productivity and nitrogen use efficiency compared to the C4 grass when fertilized. The C4 grass resulted in a net loss of soil organic carbon, while the C3 grass had a net gain. Additionally, the two crops showed different soil microbiome compositions.

GLOBAL CHANGE BIOLOGY BIOENERGY (2022)

Editorial Material Environmental Sciences

Incorporating dead material in ecosystem assessments and projections

Kelsey Archer Barnhill, J. Murray Roberts, Isla Myers-Smith, Mathew Williams, Kyle G. Dexter, Casey Ryan, Uwe Wolfram, Sebastian J. Hennige

Summary: The importance of dead matter in climate change and its role in ecosystem form and function has been overlooked. It is crucial to explicitly include its persistence or degradation in models considering ecosystem futures in a rapidly changing world.

NATURE CLIMATE CHANGE (2023)

Article Meteorology & Atmospheric Sciences

Investigating the Diurnal Radiative, Turbulent, and Biophysical Processes in the Amazonian Canopy-Atmosphere Interface by Combining LES Simulations and Observations

X. Pedruzo-Bagazgoitia, E. G. Patton, A. F. Moene, H. G. Ouwersloot, T. Gerken, L. A. T. Machado, S. T. Martin, M. Sorgel, P. C. Stoy, M. A. Yamasoe, Vila-Guerau de Arellano

Summary: We investigated the diurnal variability of the atmosphere inside and above the Amazonian rainforest. Using high-resolution simulations and comprehensive observations, we found that the variability of photosynthesis drivers is larger for sunlit leaves compared to shaded leaves. Wind-related variables show good agreement between the model and observations. However, there are discrepancies in evaporation, CO2 assimilation, and soil efflux.

JOURNAL OF ADVANCES IN MODELING EARTH SYSTEMS (2023)

Article Multidisciplinary Sciences

Critical soil moisture thresholds of plant water stress in terrestrial ecosystems

Zheng Fu, Philippe Ciais, Andrew F. Feldman, Pierre Gentine, David Makowski, I. Colin Prentice, Paul C. Stoy, Ana Bastos, Jean-Pierre Wigneron

Summary: This study quantifies plant water stress using global eddy covariance observations and identifies differences in water stress across different biomes. The results contribute to future climate and water resource projections, highlighting the importance of understanding the spatial distribution of plant water stress.

SCIENCE ADVANCES (2022)

Article Environmental Sciences

The Rate of Canopy Development Modulates the Link Between the Timing of Spring Leaf Emergence and Summer Moisture

Sander O. Denham, Mallory L. Barnes, Qing Chang, Mitchell Korolev, Jeffery D. Wood, A. Christopher Oishi, Kathryn O. Shay, Paul C. Stoy, Jiquan Chen, Kimberly A. Novick

Summary: Shifts in phenological timing, specifically spring leaf emergence, have important implications for ecosystem processes and summer soil water availability. Delayed spring-onset leads to more rapid canopy development and increases in gross primary production and evapotranspiration. However, when early spring leaf emergence coincides with meteorological conditions that contribute to soil water deficits, summer soil moisture deficits are exacerbated.

JOURNAL OF GEOPHYSICAL RESEARCH-BIOGEOSCIENCES (2023)

Article Environmental Sciences

Arctic warming-induced cold damage to East Asian terrestrial ecosystems

Jin-Soo Kim, Jong-Seong Kug, Sujong Jeong, Jin-Ho Yoon, Ning Zeng, Jinkyu Hong, Jee-Hoon Jeong, Yuan Zhao, Xiaoqiu Chen, Mathew Williams, Kazuhito Ichii, Gabriela Schaepman-Strub

Summary: The study found that winter warming in the Barents-Kara Sea region has led to negative temperature anomalies and leaf area index anomalies in most areas of East Asia, especially in the subtropical evergreen forests of southern China. These anomalies have also impacted spring vegetation activity and gross primary productivity.

COMMUNICATIONS EARTH & ENVIRONMENT (2022)

暂无数据