Article
Biochemistry & Molecular Biology
Katja Kratz, Mariela Artola-Boran, Saho Kobayashi-Era, Gene Koh, Goncalo Oliveira, Shunsuke Kobayashi, Andreia Oliveira, Xueqing Zou, Julia Richter, Masataka Tsuda, Hiroyuki Sasanuma, Shunichi Takeda, Joanna Loizou, Alessandro A. Sartori, Serena Nik-Zainal, Josef Jiricny
Summary: A study revealed a new exonuclease, FAN1, which can efficiently substitute for EXO1 in the mismatch repair process, with its functional complementation modulated by its interaction with MLH1. Loss of FAN1 exacerbates the mutational profile of EXO1-deficient cells, suggesting redundant action of these two nucleases in the same antimutagenic pathway.
MOLECULAR AND CELLULAR BIOLOGY
(2021)
Article
Biology
Adi Amar-Schwartz, Vered Ben Hur, Amina Jbara, Yuval Cohen, Georgina D. Barnabas, Eliran Arbib, Zahava Siegfried, Bayan Mashahreh, Fouad Hassouna, Asaf Shilo, Mohammad Abu-Odeh, Michael Berger, Reuven Wiener, Rami Aqeilan, Tamar Geiger, Rotem Karni
Summary: In this study, we discovered a novel role for S6K1 in regulating DNA repair through the coordinated regulation of the cell cycle, homologous recombination (HR) DNA repair (HRR) and mismatch DNA repair (MMR) mechanisms. Moreover, abnormal function of S6K1 is associated with drug resistance and poor survival in breast cancer patients.
Review
Biochemistry & Molecular Biology
Yu-Young Tsai, Chun-Hao Su, Woan-Yuh Tarn
Summary: The tumor suppressor gene p53 plays a critical role in preventing tumor progression, but inappropriate activation of p53 can lead to various human inherited disorders. Genes related to these disorders are involved in transcriptional regulation, DNA damage-repair pathways, and other cellular processes, which may result in excessive p53 activation and developmental defects. Mouse models have shown that inactivation of p53 can alleviate disorder-related phenotypes, and potential therapeutic strategies for genetic disorders associated with p53 misactivation are being discussed.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2021)
Article
Cell Biology
Sayanta Dutta, Sushweta Mahalanobish, Sukanya Saha, Mullicka Mandal, Sanchari Begam, Pritam Sadhukhan, Sumit Ghosh, Goutam Brahmachari, Parames C. Sil
Summary: Selective initiation of programmed cell death in cancer cells was achieved by a synthetic bis-coumarin derivative 3 l, which demonstrated promising cytotoxic ability and apoptosis induction specifically in human renal carcinoma cells (SKRC-45). This compound modulated apoptotic pathways and inhibited NF-kappa B nuclear localization, resulting in reduced proliferation, survival, and migration ability of SKRC-45 cells. In an in vivo tumor model, 3 l exhibited an anticancer effect without affecting kidney function.
CELLULAR SIGNALLING
(2023)
Article
Oncology
Di Wu, Qingshan Chen, Jian Chen
Summary: This study presents a case of two siblings diagnosed with brain tumors. Whole-genome sequencing analysis revealed high somatic mutation loads in the tumor samples, along with pigmentation on the skin of one patient. Further investigation identified a causal link between the brain tumors and a biallelic mutation of the MSH6 gene, which is involved in DNA mismatch repair.
FRONTIERS IN ONCOLOGY
(2022)
Article
Cell Biology
Christoph Roser, Csaba Toth, Marcus Renner, Esther Herpel, Peter Schirmacher
Summary: The study found that both nuclear and cytoplasmic ARC are overexpressed in FAP adenomas in a homogenous manner. There is a significant correlation between nuclear ARC and nuclear beta-catenin, suggesting possible regulation by beta-catenin. Furthermore, nuclear ARC is associated with p53, Bcl-2, and COX-2, indicating a substantial role in both carcinomas and precursor lesions.
CELL COMMUNICATION AND SIGNALING
(2021)
Article
Biotechnology & Applied Microbiology
Martina Fiumara, Samuele Ferrari, Attya Omer-Javed, Stefano Beretta, Luisa Albano, Daniele Canarutto, Angelica Varesi, Chiara Gaddoni, Chiara Brombin, Federica Cugnata, Erika Zonari, Matteo Maria Naldini, Matteo Barcella, Bernhard Gentner, Ivan Merelli, Luigi Naldini
Summary: Base and prime editors have shown potential for precise genetic engineering, but their cellular responses and genotoxicity are not well understood. This study compared the efficiency, toxicity, and genotoxicity between base and prime editors and Cas9 in human hematopoietic cells. The findings suggest that these editors can induce harmful effects and genotoxicity, raising concerns for their clinical applications.
NATURE BIOTECHNOLOGY
(2023)
Article
Environmental Sciences
Hongli Wang, Min Zhang, Xiuduan Xu, Shaojun Hou, Zhihui Liu, Xuejiao Chen, Chongchong Zhang, Huan Xu, Lin Wu, Kun Liu, Lun Song
Summary: This study revealed that IKK alpha played a critical role in mediating UVB-induced apoptotic responses in UVB sensitive cells by regulating the activation of the p53 pathway. Targeting the IKK alpha/p53/PERP pathway could be a potential strategy to prevent skin photo-damages induced by sunlight.
ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY
(2021)
Article
Multidisciplinary Sciences
Suisui Hao, Jingshan Tong, Anupma Jha, Denise Risnik, Darleny Lizardo, Xinyan Lu, Ajay Goel, Patricia L. Opresko, Jian Yu, Lin Zhang
Summary: Synthetic lethality can be used to target oncogenic drivers in cancer, and in this study, it was found that WRN helicase is required for the survival of MSI CRC cells. Depletion of WRN induces p53 and PUMA, leading to apoptosis in MSI CRC cells. The vulnerability of MSI CRCs to WRN loss is mediated by p53/PUMA-dependent apoptosis. WRN depletion or treatment with ML216 suppresses the growth of MSI CRCs in vitro and in vivo in a p53/PUMA-dependent manner.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
(2022)
Review
Biochemistry & Molecular Biology
Cristina Carrato, Carolina Sanz, Ana Maria Munoz-Marmol, Ignacio Blanco, Marta Pineda, Jesus Del Valle, Estela Damaso, Manel Esteller, Eva Musulen
Summary: Biallelic germline mismatch repair gene mutations causing constitutional mismatch repair deficiency syndrome are rare and often present with pediatric malignant brain tumors. Immunohistochemical assessment of MMR protein expression is essential for diagnosis, while MSI analysis may be less reliable in brain tumors. Early diagnosis is crucial to identify cases of CMMRD for appropriate treatment.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2021)
Article
Multidisciplinary Sciences
Daniela de Freitas, Fernando Nalesso Aguiar, Cristina Anton, Danielle Cristina de Almeida, Carlos Eduardo Bacchi, Jesus Paula Carvalho, Filomena Marino Carvalho
Summary: DNA mismatch repair protein deficiency (MMRd) in endometrial carcinoma is associated with the risk of Lynch syndrome and response to immune checkpoint inhibitors. It is also related to microsatellite instability and corresponds to a molecular subtype of endometrial tumor with an unclear prognosis. The study evaluated the clinicopathological characteristics and prognosis of endometrial carcinoma cases, comparing MMRd and MMRp tumors and examining the effects of MMR protein loss type and L1CAM and p53 expression.
Article
Biochemistry & Molecular Biology
Maria J. J. Solares, Deborah F. F. Kelly
Summary: Genetic mutations in tumor suppressor genes can lead to cancer, with mutations in p53 potentially exacerbating toxic effects and impeding DNA interactions, emphasizing the need for new studies to assist in redesigning targeted therapies based on protein structure.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2022)
Article
Oncology
Adar Yaacov, Oriya Vardi, Britny Blumenfeld, Avraham Greenberg, Dashiell J. Massey, Amnon Koren, Sheera Adar, Itamar Simon, Shai Rosenberg
Summary: This study systematically analyzed the mutational landscape of tumors and identified the association between mutational processes and replication timing. A novel method was developed to improve understanding of the etiology of mutational signatures.
Article
Biochemistry & Molecular Biology
Gloria X. Reyes, Anna Kolodziejczak, Lovely Jael Paul Solomon Devakumar, Takashi Kubota, Richard D. Kolodner, Christopher D. Putnam, Hans Hombauer
Summary: Mismatch repair (MMR) is crucial for maintaining genome stability by recognizing and excising DNA replication errors. In this study, overexpression of DNA ligase I (Cdc9) in Saccharomyces cerevisiae was found to interfere with MMR by prematurely ligating replication-associated nicks, leading to increased mutation rates and accumulation of MMR intermediates. This study established a general mechanism by which MMR targets newly synthesized DNA, preventing the accumulation of mutations that can contribute to the development of human cancer.
Article
Oncology
Maria Letizia Calandrella, Simona Francesconi, Cecilia Caprera, Claudia Mosillo, Claudia Caserta, Diana Giannarelli, Matteo Corsi, Serena Macrini, Annalisa Guida, Stefano Ascani, Sergio Bracarda
Summary: This study evaluated the molecular profile of upper urinary tract urothelial carcinoma (UTUC) and found a possible correlation between Nectin-4 and DNA MMR protein expression, as well as a clinically significant correlation between defective MMR phenotype and genomic instability.
Article
Psychiatry
Rohit J. Lodhi, Salaj Masand, Amna Malik, Kuppuswami Shivakumar, Victoria D. M. McAllister, Veronica O'Keane, Leah C. Young, Adrian H. Heald, Roy A. Sherwood, Katherine J. Aitchison
SCHIZOPHRENIA RESEARCH
(2016)
Article
Pathology
Fang Wu, Peng Wang, Leah C. Young, Raymond Lai, Liang Li
AMERICAN JOURNAL OF PATHOLOGY
(2009)
Article
Pathology
Leah C. Young, Kathleen M. Bone, Peng Wang, Fang Wu, Benjamin A. Adam, Samar Hegazy, Pascal Gelebart, Jelena Holovati, Liang Li, Susan E. Andrew, Raymond Lai
AMERICAN JOURNAL OF PATHOLOGY
(2011)
Review
Biochemistry & Molecular Biology
Leah C. Young, Michael J. Hendzel
BIOCHEMISTRY AND CELL BIOLOGY
(2013)
Article
Hematology
Ping Shi, Raymond Lai, Quan Lin, Abid S. Iqbal, Leah C. Young, Larry W. Kwak, Richard J. Ford, Hesham M. Amin
Article
Oncology
Peng Wang, Fang Wu, Jingdong Zhang, Todd McMullen, Leah C. Young, Robert J. Ingham, Liang Li, Raymond Lai
Article
Cell Biology
Stuart Campbell, Ismail Hassan Ismail, Leah C. Young, Guy G. Poirier, Michael J. Hendzel
Article
Biochemistry & Molecular Biology
Frederick A. Mallette, Francesca Mattiroli, Gaofeng Cui, Leah C. Young, Michael J. Hendzel, Georges Mer, Titia K. Sixma, Stephane Richard
Article
Biochemistry & Molecular Biology
J. Dien Bard, P. Gelebart, H. M. Amin, L. C. Young, Y. Ma, R. Lai
Article
Biochemistry & Molecular Biology
Peng Wang, Fang Wu, Yupo Ma, Liang Li, Raymond Lai, Leah C. Young
JOURNAL OF BIOLOGICAL CHEMISTRY
(2010)
Article
Biochemistry & Molecular Biology
Leah C. Young, Darin W. McDonald, Michael J. Hendzel
JOURNAL OF BIOLOGICAL CHEMISTRY
(2013)
Article
Biochemical Research Methods
Fang Wu, Peng Wang, Jingdong Zhang, Leah C. Young, Raymond Lai, Liang Li
MOLECULAR & CELLULAR PROTEOMICS
(2010)
Meeting Abstract
Psychiatry
S. Masand, R. Sherwood, K. J. Aitchison
EUROPEAN PSYCHIATRY
(2011)
Article
Dermatology
L. C. Young, J. Listgarten, M. J. Trotter, S. E. Andrew, V. A. Tron
BRITISH JOURNAL OF DERMATOLOGY
(2008)
Article
Genetics & Heredity
Marit A. E. van Bueren, Aniek Janssen
Summary: Eukaryotic nuclei rely on multiple repair pathways to accurately repair DNA damage, particularly in chromatin domains enriched for repetitive DNA sequences. Tailored repair mechanisms are necessary to maintain genome stability in these domains.