Human Epigenome Data Reveal Increased CpG Methylation in Alternatively Spliced Sites and Putative Exonic Splicing Enhancers

Intronic CpG content and alternative splicing in human genes containing a single cassette exon

(2010) Andigoni Malousi et al.   Epigenetics

Dynamic changes in the human methylome during differentiation

(2010) L. Laurent et al.   GENOME RESEARCH

Relationship between nucleosome positioning and DNA methylation

(2010) Ramakrishna K. Chodavarapu et al.   NATURE

The impact of intragenic CpG content on gene expression

(2010) Asli Petra Bauer et al.   NUCLEIC ACIDS RESEARCH

Lsh Mediated RNA Polymerase II Stalling at HoxC6 and HoxC8 Involves DNA Methylation

(2010) Yongguang Tao et al.   PLoS One

DNA methylation pattern changes upon long-term culture and aging of human mesenchymal stromal cells

(2009) Simone Bork et al.   AGING CELL

Antagonistic SR proteins regulate alternative splicing of tumor-related Rac1b downstream of the PI3-kinase and Wnt pathways

(2009) Vânia Gonçalves et al.   HUMAN MOLECULAR GENETICS

Li-Fraumeni and Li-Fraumeni-like syndrome mutations inp53are associated with exonic methylation and splicing regulatory elements

(2009) Sofia Kouidou et al.   MOLECULAR CARCINOGENESIS

Human DNA methylomes at base resolution show widespread epigenomic differences

(2009) Ryan Lister et al.   NATURE

Intrinsic variability of gene expression encoded in nucleosome positioning sequences

(2009) Jung Kyoon Choi et al.   NATURE GENETICS

Chromatin organization marks exon-intron structure

(2009) Schraga Schwartz et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

BioMart Central Portal—unified access to biological data

(2009) Syed Haider et al.   NUCLEIC ACIDS RESEARCH

A translational signature for nucleosome positioning in vivo

(2009) Micaela Caserta et al.   NUCLEIC ACIDS RESEARCH

Co-transcriptional splicing of constitutive and alternative exons

(2009) A. Pandya-Jones et al.   RNA

Characteristics of Nucleosome Core DNA and Their Applications in Predicting Nucleosome Positions

(2008) Hongde Liu et al.   BIOPHYSICAL JOURNAL

Splicing and splice factor SRp55 participate in the response to DNA damage by changing isoform ratios of target genes

(2008) Valery Filippov et al.   GENE

DNA conformations and their sequence preferences

(2008) Daniel Svozil et al.   NUCLEIC ACIDS RESEARCH

Identification of Nuclear and Cytoplasmic mRNA Targets for the Shuttling Protein SF2/ASF

(2008) Jeremy R. Sanford et al.   PLoS One