CognitionMaster: an object-based image analysis framework

Icy: an open bioimage informatics platform for extended reproducible research

(2012) Fabrice de Chaumont et al.   NATURE METHODS

Fiji: an open-source platform for biological-image analysis

(2012) Johannes Schindelin et al.   NATURE METHODS

NIH Image to ImageJ: 25 years of image analysis

(2012) Caroline A Schneider et al.   NATURE METHODS

Detection and Segmentation of Cell Nuclei in Virtual Microscopy Images: A Minimum-Model Approach

(2012) Stephan Wienert et al.   Scientific Reports

A supervised visual model for finding regions of interest in basal cell carcinoma images

(2011) Ricardo Gutiérrez et al.   Diagnostic Pathology

Interactive and automated application of virtual microscopy

(2011) Klaus Kayser et al.   Diagnostic Pathology

Learning regions of interest from low level maps in virtual microscopy

(2011) David Romo et al.   Diagnostic Pathology

Distributed computing in image analysis using open source frameworks and application to image sharpness assessment of histological whole slide images

(2011) Norman Zerbe et al.   Diagnostic Pathology

How to measure diagnosis-associated information in virtual slides

(2011) Klaus Kayser et al.   Diagnostic Pathology

Erratum: Sphingosine-1-phosphate mobilizes osteoclast precursors and regulates bone homeostasis

(2010) Masaru Ishii et al.   NATURE

Quantifying cellular interaction dynamics in 3D fluorescence microscopy data

(2009) Frederick Klauschen et al.   Nature Protocols

CellProfiler Analyst: data exploration and analysis software for complex image-based screens

(2008) Thouis R Jones et al.   BMC BIOINFORMATICS