4.5 Article

Role of the jelly-roll fold in substrate binding by 2-oxoglutarate oxygenases

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CURRENT OPINION IN STRUCTURAL BIOLOGY
卷 22, 期 6, 页码 691-700

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CURRENT BIOLOGY LTD
DOI: 10.1016/j.sbi.2012.10.001

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  1. Biotechnology and Biological Sciences Research Council
  2. Wellcome Trust
  3. British Heart Foundation
  4. European Research Council

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2-Oxoglutarate (2OG) and ferrous iron dependent oxygenases catalyze two-electron oxidations of a range of small and large molecule substrates, including proteins/peptides/amino acids, nucleic acids/bases, and lipids, as well as natural products including antibiotics and signaling molecules. 2OG oxygenases employ variations of a core double-stranded beta-helix (DSBH; a.k.a. jelly-roll, cupin or jumonji C (JmjC)) fold to enable binding of Fe(II) and 2OG in a subfamily conserved manner. The topology of the DSBH limits regions directly involved in substrate binding: commonly the first, second and eighth strands, loops between the second/third and fourth/fifth DSBH strands, and the N-terminal and C-terminal regions are involved in primary substrate, co-substrate and cofactor binding. Insights into substrate recognition by 2OG oxygenases will help to enable selective inhibition and bioengineering studies.

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