Genomics of Cold Hardiness in Woody Plants

Isolation and expression of a cold-responsive gene PtCBF in Poncirus trifoliata and isolation of citrus CBF promoters

(2012) L. G. He et al.   BIOLOGIA PLANTARUM

Identification of the dehydrin gene family from grapevine species and analysis of their responsiveness to various forms of abiotic and biotic stress

(2012) Yazhou Yang et al.   BMC PLANT BIOLOGY

The cold-induced basic helix-loop-helix transcription factor gene MdCIbHLH1 encodes an ICE-like protein in apple

(2012) Xiao-Ming Feng et al.   BMC PLANT BIOLOGY

Generation and analysis of blueberry transcriptome sequences from leaves, developing fruit, and flower buds from cold acclimation through deacclimation

(2012) Lisa J Rowland et al.   BMC PLANT BIOLOGY

Transcriptome survey reveals increased complexity of the alternative splicing landscape inArabidopsis

(2012) Yamile Marquez et al.   GENOME RESEARCH

Unraveling the roles of CBF1, CBF4 and dehydrin 1 genes in the response of table grapes to high CO2 levels and low temperature

(2012) Carlos Fernandez-Caballero et al.   JOURNAL OF PLANT PHYSIOLOGY

Characterization of grape C-repeat-binding factor 2 and B-box-type zinc finger protein in transgenic Arabidopsis plants under stress conditions

(2012) Masayuki Kobayashi et al.   MOLECULAR BIOLOGY REPORTS

Overexpression of a blueberry-derived CBF gene enhances cold tolerance in a southern highbush blueberry cultivar

(2012) Aaron E. Walworth et al.   MOLECULAR BREEDING

Genome-wide analysis and expression profiling of the DREB transcription factor gene family in Malus under abiotic stress

(2012) Tao Zhao et al.   MOLECULAR GENETICS AND GENOMICS

Low-temperature perception leading to gene expression and cold tolerance in higher plants

(2012) Marc R. Knight et al.   NEW PHYTOLOGIST

Understanding plant cold hardiness: an opinion

(2012) Lawrence V. Gusta et al.   PHYSIOLOGIA PLANTARUM

The Arabidopsis E3 Ubiquitin Ligase HOS1 Negatively Regulates CONSTANS Abundance in the Photoperiodic Control of Flowering

(2012) A. Lazaro et al.   PLANT CELL

Clinal variation in the non-acclimated and cold-acclimated freezing tolerance of Arabidopsis thaliana accessions

(2012) ELLEN ZUTHER et al.   PLANT CELL AND ENVIRONMENT

Plum (Prunus domestica) Trees Transformed with Poplar FT1 Result in Altered Architecture, Dormancy Requirement, and Continuous Flowering

(2012) Chinnathambi Srinivasan et al.   PLoS One

Photoperiodic regulation of the C-repeat binding factor (CBF) cold acclimation pathway and freezing tolerance in Arabidopsis thaliana

(2012) C.-M. Lee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The peach genome

(2012) Pere Arús et al.   Tree Genetics & Genomes

Citrus genomics

(2012) Fred G. Gmitter et al.   Tree Genetics & Genomes

Progress in Myrtaceae genetics and genomics: Eucalyptus as the pivotal genus

(2012) Dario Grattapaglia et al.   Tree Genetics & Genomes

Functional characterization of two almond C-repeat-binding factors involved in cold response

(2012) P. M. Barros et al.   TREE PHYSIOLOGY

Photoperiod, temperature and water deficit differentially regulate the expression of four dehydrin genes from Eucalyptus globulus

(2012) Marta Fernández et al.   TREES-STRUCTURE AND FUNCTION

AP2/ERF family transcription factors in plant abiotic stress responses

(2011) Junya Mizoi et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Role of miRNAs and siRNAs in biotic and abiotic stress responses of plants

(2011) Basel Khraiwesh et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Genomic and transcriptomic analysis of the AP2/ERF superfamily in Vitis vinifera

(2011) Francesco Licausi et al.   BMC GENOMICS

Identification of tissue-specific, abiotic stress-responsive gene expression patterns in wine grape (Vitis vinifera L.) based on curation and mining of large-scale EST data sets

(2011) Richard L Tillett et al.   BMC PLANT BIOLOGY

Gene Expression Profiling of Plants under Salt Stress

(2011) A. Jamil et al.   CRITICAL REVIEWS IN PLANT SCIENCES

Cold-induced dehydrins from Poncirus trifoliata localized in the nucleus

(2011) Mehtap Şahin-Çevik et al.   JOURNAL OF PLANT BIOCHEMISTRY AND BIOTECHNOLOGY

Expression analysis of phytochromes A, B and floral integrator genes during the entry and exit of grapevine-buds from endodormancy

(2011) Francisco J. Pérez et al.   JOURNAL OF PLANT PHYSIOLOGY

Histone modifications and expression of DAM6 gene in peach are modulated during bud dormancy release in a cultivar-dependent manner

(2011) Carmen Leida et al.   NEW PHYTOLOGIST

Phytozome: a comparative platform for green plant genomics

(2011) David M. Goodstein et al.   NUCLEIC ACIDS RESEARCH

Achievements and Challenges in Understanding Plant Abiotic Stress Responses and Tolerance

(2011) F. Qin et al.   PLANT AND CELL PHYSIOLOGY

Analysis of global changes in gene expression during activity-dormancy cycle in hybrid aspen apex

(2011) Anna Karlberg et al.   Plant Biotechnology

Rice homologs of inducer of CBF expression (OsICE) are involved in cold acclimation

(2011) Junya Nakamura et al.   Plant Biotechnology

The Vitis vinifera C-repeat binding protein 4 (VvCBF4) transcriptional factor enhances freezing tolerance in wine grape

(2011) Richard L. Tillett et al.   PLANT BIOTECHNOLOGY JOURNAL

Induction of Dormancy in Arabidopsis Summer Annuals Requires Parallel Regulation of DOG1 and Hormone Metabolism by Low Temperature and CBF Transcription Factors

(2011) S. L. Kendall et al.   PLANT CELL

Vitis CBF1 and Vitis CBF4 differ in their effect on Arabidopsis abiotic stress tolerance, development and gene expression

(2011) MAHBUBA SIDDIQUA et al.   PLANT CELL AND ENVIRONMENT

Overexpression of FTL1/DDF1, an AP2 transcription factor, enhances tolerance to cold, drought, and heat stresses in Arabidopsis thaliana

(2011) Hong-Gyu Kang et al.   PLANT SCIENCE

Ectopic expression of a novel peach (Prunus persica) CBF transcription factor in apple (Malus × domestica) results in short-day induced dormancy and increased cold hardiness

(2011) Michael Wisniewski et al.   PLANTA

Genetic structure and domestication history of the grape

(2011) Sean Myles et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Isolation and characterization of three cold acclimation-responsive dehydrin genes from Eucalyptus globulus

(2011) Marta Fernandez et al.   Tree Genetics & Genomes

Poplar as a feedstock for biofuels: A review of compositional characteristics

(2010) Poulomi Sannigrahi et al.   Biofuels Bioproducts & Biorefining-Biofpr

Low-temperature-induced transcription factors in grapevine enhance cold tolerance in transgenic Arabidopsis plants

(2010) Yuki Takuhara et al.   JOURNAL OF PLANT PHYSIOLOGY

Calcium-Regulated Transcription in Plants

(2010) Yael Galon et al.   Molecular Plant

The genome of the domesticated apple (Malus × domestica Borkh.)

(2010) Riccardo Velasco et al.   NATURE GENETICS

Two EguCBF1 genes overexpressed in Eucalyptus display a different impact on stress tolerance and plant development

(2010) Marie Navarro et al.   PLANT BIOTECHNOLOGY JOURNAL

Isolation, Phylogeny and Expression Patterns of AP2-Like Genes in Apple (Malus × domestica Borkh)

(2010) Jing Zhuang et al.   PLANT MOLECULAR BIOLOGY REPORTER

Characterization of Transcriptional Complexity during Berry Development in Vitis vinifera Using RNA-Seq

(2010) S. Zenoni et al.   PLANT PHYSIOLOGY

Circadian Clock Components Regulate Entry and Affect Exit of Seasonal Dormancy as Well as Winter Hardiness in Populus Trees

(2010) C. Ibanez et al.   PLANT PHYSIOLOGY

Molecular Basis of Plant Cold Acclimation: Insights Gained from Studying the CBF Cold Response Pathway

(2010) M. F. Thomashow   PLANT PHYSIOLOGY

The CBFs: Three arabidopsis transcription factors to cold acclimate

(2010) Joaquín Medina et al.   PLANT SCIENCE

Dwarf apple MbDREB1 enhances plant tolerance to low temperature, drought, and salt stress via both ABA-dependent and ABA-independent pathways

(2010) Wei Yang et al.   PLANTA

Rapid Genomic Characterization of the Genus Vitis

(2010) Sean Myles et al.   PLoS One

CLASSIFICATION OF GENOTYPES OF EUCALYPTUS GLOBULUS UNDER COLD CONDITIONS USING THEIR FREE AMINO ACIDS CONTENT ON LEAVES AND REGULARIZED DISCRIMINANT ANALYSIS (RDA)

(2010) ROSARIO DEL P CASTILLO et al.   JOURNAL OF THE CHILEAN CHEMICAL SOCIETY

Molecular cloning, characterization and expression analysis of PtrHOS1, a novel gene of cold responses from trifoliate orange [Poncirus trifoliata (L.) Raf.]

(2009) De-Chun Liu et al.   ACTA PHYSIOLOGIAE PLANTARUM

DNA binding by the Arabidopsis CBF1 transcription factor requires the PKKP/RAGRxKFxETRHP signature sequence

(2009) Donatella Canella et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

cDNA cloning and expression analysis of a Poncirus trifoliata CBF gene

(2009) H. L. Wang et al.   BIOLOGIA PLANTARUM

Environmental regulation of stomatal development

(2009) Stuart A Casson et al.   CURRENT OPINION IN PLANT BIOLOGY

Complementary regulation of four Eucalyptus CBF genes under various cold conditions

(2009) M. Navarro et al.   JOURNAL OF EXPERIMENTAL BOTANY

Overexpression of the CBF2 transcriptional activator in Arabidopsis delays leaf senescence and extends plant longevity

(2009) Michal Sharabi-Schwager et al.   JOURNAL OF EXPERIMENTAL BOTANY

Isolation and expression analysis of low temperature-induced genes in white poplar (Populus alba)

(2009) Pierluigi Maestrini et al.   JOURNAL OF PLANT PHYSIOLOGY

DEAR1, a transcriptional repressor of DREB protein that mediates plant defense and freezing stress responses in Arabidopsis

(2009) Tomokazu Tsutsui et al.   JOURNAL OF PLANT RESEARCH

Improve freezing tolerance in transgenic poplar by overexpressing a ω-3 fatty acid desaturase gene

(2009) Z. Zhou et al.   MOLECULAR BREEDING

Cold stress and acclimation - what is important for metabolic adjustment?

(2009) A. Janská et al.   PLANT BIOLOGY

Roles for Arabidopsis CAMTA Transcription Factors in Cold-Regulated Gene Expression and Freezing Tolerance

(2009) C. J. Doherty et al.   PLANT CELL

DNA binding of citrus dehydrin promoted by zinc ion

(2009) MASAKAZU HARA et al.   PLANT CELL AND ENVIRONMENT

A moderate decrease in temperature inducesCOR15aexpression through the CBF signaling cascade and enhances freezing tolerance

(2009) Yi Wang et al.   PLANT JOURNAL

Metabolic Pathways Involved in Cold Acclimation Identified by Integrated Analysis of Metabolites and Transcripts Regulated by DREB1A and DREB2A

(2009) K. Maruyama et al.   PLANT PHYSIOLOGY

The Phytochrome-Interacting Factor PIF7 Negatively Regulates DREB1 Expression under Circadian Control in Arabidopsis

(2009) S. Kidokoro et al.   PLANT PHYSIOLOGY

The 2007 Eastern US Spring Freeze: Increased Cold Damage in a Warming World?

(2008) Lianhong Gu et al.   BIOSCIENCE

Generation and analysis of an Eucalyptus globulus cDNA library constructed from seedlings subjected to low temperature conditions

(2008) Susana Rasmussen-Poblete et al.   ELECTRONIC JOURNAL OF BIOTECHNOLOGY

Identification of ICE2, a gene involved in cold acclimation which determines freezing tolerance in Arabidopsis thaliana

(2008) Oksana V. Fursova et al.   GENE

Multivariate strategies for classification ofEucalyptus globulus genotypes using carbohydrates content and NIR spectra for evaluation of their cold resistance

(2008) Rosario Castillo et al.   JOURNAL OF CHEMOMETRICS

Sucrose helps regulate cold acclimation of Arabidopsis thaliana

(2008) I. Rekarte-Cowie et al.   JOURNAL OF EXPERIMENTAL BOTANY

Modular gene expression in Poplar: a multilayer network approach

(2008) Andreas Grönlund et al.   NEW PHYTOLOGIST

Expressed sequence tag analysis of the response of apple (Malus x domestica ‘Royal Gala’) to low temperature and water deficit

(2008) Michael Wisniewski et al.   PHYSIOLOGIA PLANTARUM

Structure and Functional Analysis of Wheat ICE (Inducer of CBF Expression) Genes

(2008) Mohamed Badawi et al.   PLANT AND CELL PHYSIOLOGY

Arabidopsis DREB2A-Interacting Proteins Function as RING E3 Ligases and Negatively Regulate Plant Drought Stress-Responsive Gene Expression

(2008) F. Qin et al.   PLANT CELL

SCREAM/ICE1 and SCREAM2 Specify Three Cell-State Transitional Steps Leading to Arabidopsis Stomatal Differentiation

(2008) M. M. Kanaoka et al.   PLANT CELL

The Cold-Inducible CBF1 Factor-Dependent Signaling Pathway Modulates the Accumulation of the Growth-Repressing DELLA Proteins via Its Effect on Gibberellin Metabolism

(2008) P. Achard et al.   PLANT CELL

The DDF1 transcriptional activator upregulates expression of a gibberellin-deactivating gene,GA2ox7, under high-salinity stress in Arabidopsis

(2008) Hiroshi Magome et al.   PLANT JOURNAL

An in silico strategy identified the target gene candidates regulated by dehydration responsive element binding proteins (DREBs) in Arabidopsis genome

(2008) Shichen Wang et al.   PLANT MOLECULAR BIOLOGY

Involvement of CBF Transcription Factors in Winter Hardiness in Birch

(2008) A. Welling et al.   PLANT PHYSIOLOGY

Sequencing and annotation of the evergrowing locus in peach [Prunus persica (L.) Batsch] reveals a cluster of six MADS-box transcription factors as candidate genes for regulation of terminal bud formation

(2008) Douglas Gary Bielenberg et al.   Tree Genetics & Genomes

Development and functional annotation of an 11,303-EST collection from Eucalyptus for studies of cold tolerance

(2008) Guylaine Keller et al.   Tree Genetics & Genomes

Interaction of photoperiod and temperature in the control of growth and dormancy of Prunus species

(2007) Ola M. Heide   SCIENTIA HORTICULTURAE