期刊
COMPUTERIZED MEDICAL IMAGING AND GRAPHICS
卷 35, 期 7-8, 页码 579-591出版社
PERGAMON-ELSEVIER SCIENCE LTD
DOI: 10.1016/j.compmedimag.2010.11.009
关键词
Digitized histopathology; Breast cancer grading; Whole slide image; Multi-scale analysis; Dynamic sampling; Virtual microscopy; Graphics processing unit
资金
- MMedWeb (MMedWeb A*STAR/SERC) [A*STAR SERC 052 101 0103, NUS R-252-000-319-305]
- ONCO-MEDIA
Histopathological examination is a powerful standard for the prognosis of critical diseases. But, despite significant advances in high-speed and high-resolution scanning devices or in virtual exploration capabilities, the clinical analysis of whole slide images (WSI) largely remains the work of human experts. We propose an innovative platform in which multi-scale computer vision algorithms perform fast analysis of a histopathological WSI. It relies on application-driven for high-resolution and generic for low-resolution image analysis algorithms embedded in a multi-scale framework to rapidly identify the high power fields of interest used by the pathologist to assess a global grading. GPU technologies as well speed up the global time-efficiency of the system. Sparse coding and dynamic sampling constitute the keystone of our approach. These methods are implemented within a computer-aided breast biopsy analysis application based on histopathology images and designed in collaboration with a pathology department. The current ground truth slides correspond to about 36,000 high magnification (40x) high power fields. The processing time to achieve automatic WSI analysis is on a par with the pathologist's performance (about ten minutes a WSI), which constitutes by itself a major contribution of the proposed methodology. (C) 2010 Elsevier Ltd. All rights reserved.
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