Nanomolar fluorescent detection of c-di-GMP using a modular aptamer strategy

Engineered Allosteric Ribozymes That Sense the Bacterial Second Messenger Cyclic Diguanosyl 5′-Monophosphate

(2012) Hongzhou Gu et al.   ANALYTICAL CHEMISTRY

Malachite Green Derivatives for Two-Photon RNA Detection

(2012) Jacques Lux et al.   CHEMBIOCHEM

You’ve come a long way: c-di-GMP signaling

(2012) Holger Sondermann et al.   CURRENT OPINION IN MICROBIOLOGY

A C-di-GMP–proflavine–hemin supramolecular complex has peroxidase activity—implication for a simple colorimetric detection

(2012) Shizuka Nakayama et al.   Molecular BioSystems

Fluorescence Imaging of Cellular Metabolites with RNA

(2012) Jeremy S. Paige et al.   SCIENCE

Structural and Biochemical Characterization of Linear Dinucleotide Analogues Bound to the c-di-GMP-I Aptamer

(2011) Kathryn D. Smith et al.   BIOCHEMISTRY

Facile conversion of RNA aptamers to modular fluorescent sensors with tunable detection wavelengths

(2011) Shun Nakano et al.   BIOORGANIC & MEDICINAL CHEMISTRY LETTERS

Small-molecule fluorescent probes for specific RNA targets

(2011) Asako Murata et al.   CHEMICAL COMMUNICATIONS

Thiazole Orange-Induced c-di-GMP Quadruplex Formation Facilitates a Simple Fluorescent Detection of This Ubiquitous Biofilm Regulating Molecule

(2011) Shizuka Nakayama et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

RNA Mimics of Green Fluorescent Protein

(2011) J. S. Paige et al.   SCIENCE

A c-di-GMP Effector System Controls Cell Adhesion by Inside-Out Signaling and Surface Protein Cleavage

(2011) Peter D. Newell et al.   PLOS BIOLOGY

Combining SELEX Screening and Rational Design to Develop Light-Up Fluorophore−RNA Aptamer Pairs for RNA Tagging

(2010) Jungjoon Lee et al.   ACS Chemical Biology

A binary Cy3 aptamer probe composed of folded modules

(2010) Kei Endo et al.   ANALYTICAL BIOCHEMISTRY

Structural and Biochemical Determinants of Ligand Binding by the c-di-GMP Riboswitch,

(2010) Kathryn D. Smith et al.   BIOCHEMISTRY

A liquid chromatography-coupled tandem mass spectrometry method for quantitation of cyclic di-guanosine monophosphate

(2010) Christian Spangler et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Modular blue fluorescent RNA sensors for label-free detection of target molecules

(2010) Chika Furutani et al.   Molecular BioSystems

Asymmetrical Distribution of the Second Messenger c-di-GMP upon Bacterial Cell Division

(2010) M. Christen et al.   SCIENCE

Label-Free Fluorescent Aptamer Sensor Based on Regulation of Malachite Green Fluorescence

(2009) Weichen Xu et al.   ANALYTICAL CHEMISTRY

Recognition of the bacterial second messenger cyclic diguanylate by its cognate riboswitch

(2009) Nadia Kulshina et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Structural basis of ligand binding by a c-di-GMP riboswitch

(2009) Kathryn D Smith et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Transcription monitoring using fused RNA with a dye-binding light-up aptamer as a tag: a blue fluorescent RNA

(2008) Shinsuke Sando et al.   CHEMICAL COMMUNICATIONS

Synthesis of New Fluorogenic Cyanine Dyes and Incorporation into RNA Fluoromodules

(2008) Tudor P. Constantin et al.   ORGANIC LETTERS

Riboswitches in Eubacteria Sense the Second Messenger Cyclic Di-GMP

(2008) N. Sudarsan et al.   SCIENCE