4.4 Article

Hen Egg-White Lysozyme Crystallisation: Protein Stacking and Structure Stability Enhanced by a Tellurium(VI)-Centred Polyoxotungstate

期刊

CHEMBIOCHEM
卷 16, 期 2, 页码 233-241

出版社

WILEY-V C H VERLAG GMBH
DOI: 10.1002/cbic.201402597

关键词

Anderson-Evans; electrostatic interactions; hen egg-white lysozyme; polyoxometalates; protein structures

资金

  1. Fonds zur Forderung der wissenschaftlichen Forschung (FWF) [P23711-N19]
  2. European Community [283570]
  3. Jacobs University
  4. German Science Foundation (DFG)
  5. German Academic Exchange Service (DAAD)
  6. Austrian Science Fund (FWF) [P23711] Funding Source: Austrian Science Fund (FWF)
  7. Austrian Science Fund (FWF) [P 23711] Funding Source: researchfish

向作者/读者索取更多资源

As synchrotron radiation becomes more intense, detectors become faster and structure-solving software becomes more elaborate, obtaining single crystals suitable for data collection is now the bottleneck in macromolecular crystallography. Hence, there is a need for novel and advanced crystallisation agents with the ability to crystallise proteins that are otherwise challenging. Here, an Anderson-Evans-type polyoxometalate (POM), specifically Na-6[TeW6O24]center dot 22H(2)O (TEW), is employed as a crystallisation additive. Its effects on protein crystallisation are demonstrated with hen egg-white lysozyme (HEWL), which co-crystallises with TEW in the vicinity (or within) the liquid-liquid phase separation (LLPS) region. The X-ray structure (PDB ID: 4PHI) determination revealed that TEW molecules are part of the crystal lattice, thus demonstrating specific binding to HEWL with electrostatic interactions and hydrogen bonds. The negatively charged TEW polyoxotungstate binds to sites with a positive electrostatic potential located between two (or more) symmetry-related protein chains. Thus, TEW facilitates the formation of protein-protein interfaces of otherwise repulsive surfaces, and thereby the realisation of a stable crystal lattice. In addition to retaining the isomorphicity of the protein structure, the anomalous scattering of the POMs was used for macromolecular phasing. The results suggest that hexatungstotellurate(VI) has great potential as a crystallisation additive to promote both protein crystallisation and structure elucidation.

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.4
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

Review Chemistry, Inorganic & Nuclear

Polyoxidovanadates' interactions with proteins: An overview

Manuel Aureliano, Nadiia I. Gumerova, Giuseppe Sciortino, Eugenio Garribba, Craig C. McLauchlan, Annette Rompel, Debbie C. Crans

Summary: This review provides a detailed description of the interactions between polyoxidovanadates (POVs) and various proteins, as well as their pharmacological actions. X-ray crystallographic studies were used to investigate the interactions between POVs and specific proteins. Additionally, the interactions of POVs with proteins related to muscle contraction, serum, oxidative stress, and diabetes were discussed. The modes of interaction for POVs include H-bond, electrostatic, H-bond + electrostatic, van der Waals, and covalent binding.

COORDINATION CHEMISTRY REVIEWS (2022)

Article Chemistry, Multidisciplinary

Synthesis and characterization of the 'Japanese rice-ball'-shaped Molybdenum Blue Na4[Mo2O2(OH)4(C6H4NO2)2]2[Mo120Ce6O366-H12(OH)2(H2O)76]∼200H2O

Emir Al-Sayed, Elias Tanuhadi, Gerald Giester, Annette Rompel

Summary: In this study, the hybridization of lanthanide-containing molybdenum blue (Ln-MB) with 2-picolinic acid was achieved, resulting in the formation of Ln-MB molecules with a unique shape. The position of the carboxylic acid group was found to be crucial in obtaining single crystals of Ln-MB. Various experimental techniques were employed to confirm the structure and composition of the synthesized molecules.

ACTA CRYSTALLOGRAPHICA SECTION C-STRUCTURAL CHEMISTRY (2022)

Article Chemistry, Analytical

Quantifying up to 90 polyphenols simultaneously in human bio-fluids by LC-MS/MS

Ian Oesterle, Dominik Braun, Annette Rompel, Benedikt Warth

Summary: Establishing a targeted LC-MS/MS method for human biomonitoring of polyphenols allows for accurate quantification of various polyphenol classes and high-throughput sample processing in large-scale population studies. The method demonstrates high extraction efficiency and low detection limits across multiple sample types. In a validation and proof-of-principle study, the method successfully detected and studied the concentration changes of multiple polyphenols in urine after ingestion of a high polyphenol smoothie.

ANALYTICA CHIMICA ACTA (2022)

Article Plant Sciences

Biochemical Characterization of Black and Green Mutant Elderberry during Fruit Ripening

Maja Mikulic-Petkovsek, Anton Ivancic, Sasa Gacnik, Robert Veberic, Metka Hudina, Silvija Marinovic, Christian Molitor, Heidi Halbwirth

Summary: This study analyzed the changes in sugar content, organic acids, phenolic compounds, and selected enzyme activities in the anthocyanin pathway in NIGRA (Sambucus nigra var. nigra-black fruits) and VIRIDIS (S. nigra var. viridis-green fruits) fruits at four stages of ripening. The results showed that glucose and fructose content in green fruits were higher than in colored fruits, and sugar content increased significantly until the third developmental stage. NIGRA berries had a high content of anthocyanins and flavonols, while flavonols were the major phenolic group in VIRIDIS fruits. NIGRA fruits showed strong activation of the late anthocyanin pathway, while VIRIDIS fruits lacked anthocyanins and only had one flavanol.

PLANTS-BASEL (2023)

Article Chemistry, Inorganic & Nuclear

Synthesis, Characterization, and Antibacterial Activity of Ni-Substituted Krebs-type Sandwich-Tungstobismuthates Functionalized with Amino Acids

Morteza Rafieeshad, Nadiia I. Gumerova, Elias Tanuhadi, Gerald Giester, Hana Cipcic-Paljetak, Donatella Verbanac, Annette Rompel

Summary: Four new Ni-substituted Krebs-type sandwich-tungstobismuthates decorated with amino acids have been synthesized by one-pot solution methods. Only one compound showed antibacterial activity against four bacterial strains with minimum inhibitory concentration ranging from 8 to 256 μg/mL.

INORGANIC CHEMISTRY (2023)

Editorial Material Materials Science, Multidisciplinary

The Biological Applications of Metals and Metal Complexes

Manuel Aureliano, Nadiia I. Gumerova, Annette Rompel

METALS (2023)

Article Multidisciplinary Sciences

Speciation atlas of polyoxometalates in aqueous solutions

Nadiia I. Gumerova, Annette Rompel

Summary: This article introduces a method for studying the coordination phenomena of complex polyatomic ions and develops a speciation atlas containing 10 commonly used polyoxometalates. The atlas provides a database and predictive model for other polyoxometalates, revealing the potential of polyoxometalates in biological and catalytic applications.

SCIENCE ADVANCES (2023)

Article Chemistry, Analytical

Exposomic Biomonitoring of Polyphenols by Non-Targeted Analysis and Suspect Screening

Ian Oesterle, Manuel Pristner, Sabrina Berger, Mingxun Wang, Vinicius Verri Hernandes, Annette Rompel, Benedikt Warth

Summary: Polyphenols, abundant in plants and fungi, have beneficial bioactive properties. High-resolution mass spectrometry (HRMS) is favored for analyzing their complexity. This study evaluated the advantages of HRMS, using untargeted techniques and online resources, for annotating polyphenols and other molecules. Despite the sensitivity loss compared to low-resolution mass spectrometry (LRMS), HRMS is capable of comprehensively investigating human polyphenol exposure, linking it to human health effects and toxicological mixture effects with other xenobiotics.

ANALYTICAL CHEMISTRY (2023)

Article Chemistry, Physical

Immobilization of Agaricus bisporus Polyphenol Oxidase 4 on mesoporous silica: Towards mimicking key enzymatic processes in peat soils

Claudia Iriarte-Mesa, Matthias Pretzler, Cornelia von Baeckmann, Hanspeter Kahlig, Regina Kaehlig, Annette Rompel, Freddy Kleitz

Summary: This study demonstrates the efficient catalytic oxidation of various phenolic compounds by immobilizing functional mushroom tyrosinase on mesoporous SBA-15-type silica, while retaining the enzyme activity. This method shows potential for in situ identification of soil samples.

JOURNAL OF COLLOID AND INTERFACE SCIENCE (2023)

Review Chemistry, Multidisciplinary

Heterotrophy among Cyanobacteria

Ronald Stebegg, Georg Schmetterer, Annette Rompel

Summary: This review highlights that cyanobacteria are more than simple photoautotrophs and their flexibility towards different environmental conditions has been underestimated in the past. It provides a summary of known cyanobacterial strains capable of heterotrophy and lists the potential substrates for each strain. The review discusses the specific conditions that induce heterotrophic growth for each strain.

ACS OMEGA (2023)

Article Chemistry, Physical

Immobilization of a [CoIIICoII(H2O)W11O39]7- Polyoxoanion for the Photocatalytic Oxygen Evolution Reaction

Sreejith P. Nandan, Nadiia I. Gumerova, Jasmin S. Schubert, Hikaru Saito, Annette Rompel, Alexey Cherevan, Dominik Eder

Summary: This study successfully heterogenized a molecular all-inorganic polyoxometalate catalyst onto a TiO2 surface, creating a novel heterogeneous photosystem for efficient and stable light-driven water oxidation. The hybrid photosystem exhibited constant catalytic rate for at least 10 hours, demonstrating the stability provided by TiO2 and its role as a photosensitizer.

ACS MATERIALS AU (2022)

Article Chemistry, Multidisciplinary

Trisubstituted 4f-and 4d tungstoantimonates as artificial phosphoesterases for nerve agent degradation

Elias Tanuhadi, Annette Rompel

Summary: Three new trisubstituted 4f- and 4d tungstoantimonates were synthesized using a double-template synthetic approach. The compounds were characterized in the solid state and in solution, and shown to be highly active, recyclable, and stable Lewis-acid catalysts for the hydrolysis of the nerve agent simulant DMNP.

CHEMICAL COMMUNICATIONS (2022)

Review Nanoscience & Nanotechnology

Lanthanides Singing the Blues: Their Fascinating Role in the Assembly of Gigantic Molybdenum Blue Wheels

Emir Al-Sayed, Annette Rompel

Summary: This review discusses the classification, structural characteristics, and interactions with lanthanide ions of molybdenum blues. The focus is on wheel-shaped structures of molybdenum blues, including both organic and inorganic hybrid structures, and highlights the key factors and research methods in their synthesis. The unique behavior and potential applications of wheel-shaped Ln-MBs in catalysis, molecular recognition, and separation are emphasized.

ACS NANOSCIENCE AU (2022)

Article Food Science & Technology

Polyphenol oxidase and enzymatic browning in apricot (Prunus armeniaca L.): Effect on phenolic composition and deduction of main substrates

Ala Eddine Derardja, Matthias Pretzler, Ioannis Kampatsikas, Milena Radovic, Anna Fabisikova, Martin Zehl, Malika Barkat, Annette Rompel

Summary: In this study, the effect of enzymatic browning on the phenolic composition of apricot was investigated. The results showed that browning significantly decreased total phenolics and antioxidant capacity, with catechin, epicatechin, and B-type procyanidins being the most affected phenolics.

CURRENT RESEARCH IN FOOD SCIENCE (2022)

Article Crystallography

Crystal structure of hexasodium tetraserinolium paratungstate B decahydrate, [Na6{(CH2OH)2CHNH3}4][W12(OH)2]•10H2O

Kleanthi Sifaki, Nadiia Gumerova, Gerald Giester, Annette Rompel

Summary: The crystal structure of a polyoxometalate-based organic-inorganic hybrid compound is reported. The compound consists of a symmetrical hydroxyl-oxygen-octadeca-mu-oxido-octadecaoxidododecatungstate anion and is stabilized by sodium cations and water molecules, forming a three-dimensional framework structure.

ACTA CRYSTALLOGRAPHICA SECTION E-CRYSTALLOGRAPHIC COMMUNICATIONS (2022)

暂无数据