To Infinium, and Beyond!
CANCER CELL (2010)
期刊
CANCER CELL
卷 17, 期 5, 页码 419-420出版社
CELL PRESS
关键词
资金
- NCI NIH HHS [R01 CA129541, R01 CA129541-04] Funding Source: Medline
作者
我是这篇论文的作者
推荐
Prenatal exposure to triclosan assessed in multiple urine samples and placental DNA methylation
Paulina Jedynak, Lucile Broseus, Jorg Tost, Florence Busato, Stephan Gabet, Cathrine Thomsen, Amrit K. Sakhi, Isabelle Pin, Remy Slama, Johanna Lepeule, Claire Philippat
ENVIRONMENTAL POLLUTION (2023)
Navigating the hydroxymethylome: experimental biases and quality control tools for the tandem bisulfite and oxidative bisulfite Illumina microarrays
Ze Zhang, Min Kyung Lee, Laurent Perreard, Karl T. Kelsey, Brock C. Christensen, Lucas A. Salas
EPIGENOMICS (2022)
A systematic evaluation of normalization methods and probe replicability using infinium EPIC methylation data
H. Welsh, C. M. P. F. Batalha, W. Li, K. L. Mpye, N. C. Souza-Pinto, M. S. Naslavsky, E. J. Parra
CLINICAL EPIGENETICS (2023)
Batch-effect detection, correction and characterisation in Illumina HumanMethylation450 and MethylationEPIC BeadChip array data
Jason P. Ross, Susan van Dijk, Melinda Phang, Michael R. Skilton, Peter L. Molloy, Yalchin Oytam
CLINICAL EPIGENETICS (2022)
Reproducibility of the Infinium methylationEPIC BeadChip assay using low DNA amounts
Steffan Noe Christiansen, Jeppe Dyrberg Andersen, Marie-Louise Kampmann, Jing Liu, Mikkel Meyer Andersen, Jacob Tfelt-Hansen, Niels Morling
EPIGENETICS (2022)
Clinicopathological impacts of DNA methylation alterations on pancreatic ductal adenocarcinoma: prediction of early recurrence based on genome-wide DNA methylation profiling
Yutaka Endo, Mao Fujimoto, Nanako Ito, Yoriko Takahashi, Minoru Kitago, Masahiro Gotoh, Nobuyoshi Hiraoka, Teruhiko Yoshida, Yuko Kitagawa, Yae Kanai, Eri Arai
JOURNAL OF CANCER RESEARCH AND CLINICAL ONCOLOGY (2021)
RhoC in association with TET2/WDR5 regulates cancer stem cells by epigenetically modifying the expression of pluripotency genes
Pavana Thomas, Sweta Srivastava, Avinash H. Udayashankara, Samyuktha Damodaran, Lokendra Yadav, Boby Mathew, Srinag Bangalore Suresh, Amit Kumar Mandal, Nirmala Srikantia
CELLULAR AND MOLECULAR LIFE SCIENCES (2023)
Nanoparticles: From synthesis to applications and beyond
Atida Selmani, Davor Kovacevic, Klemen Bohinc
ADVANCES IN COLLOID AND INTERFACE SCIENCE (2022)
From NSAIDs to Glucocorticoids and Beyond
Ajantha Sinniah, Samia Yazid, Rod J. Flower
CELLS (2021)
A journey from phosphotyrosine to phosphohistidine and beyond
Tony Hunter
MOLECULAR CELL (2022)
AutoML to Date and Beyond: Challenges and Opportunities
Shubhra Kanti Karmaker (Santu), Md Mahadi Hassan, Micah J. Smith, Lei Xu, Chengxiang Zhai, Kalyan Veeramachaneni
ACM COMPUTING SURVEYS (2021)
The Role of Serotonergic Gene Methylation in Regulating Anxiety-Related Personality Traits in Chimpanzees
Nicky Staes, Elaine E. Guevara, William D. Hopkins, Steven J. Schapiro, Marcel Eens, Chet C. Sherwood, Brenda J. Bradley
BIOLOGY-BASEL (2022)
Genome-wide decrease in DNA methylation in adults with epilepsy treated with modified ketogenic diet: A prospective study
Sigrid Pedersen, Magnhild Kverneland, Karl Otto Nakken, Knut Rudi, Per Ole Iversen, Kristina Gervin, Kaja Kristine Selmer
EPILEPSIA (2022)
Abnormal methylation characteristics predict chemoresistance and poor prognosis in advanced high-grade serous ovarian cancer
Li-yuan Feng, Bing-bing Yan, Yong-zhi Huang, Li Li
CLINICAL EPIGENETICS (2021)
PM2.5-related DNA methylation and the association with lung function in non-smokers
Ge Mu, Xiuquan Nie, Shijie Yang, Zi Ye, Man Cheng, Lieyang Fan, Weihong Qiu, Qiyou Tan, Min Zhou, Yanjun Guo, Weihong Chen
ENVIRONMENTAL POLLUTION (2023)
cIMPACT-NOW update 7: advancing the molecular classification of ependymal tumors
David W. Ellison, Kenneth D. Aldape, David Capper, Maryam Fouladi, Mark R. Gilbert, Richard J. Gilbertson, Cynthia Hawkins, Thomas Merchant, Kristian Pajtler, Sriram Venneti, David N. Louis
BRAIN PATHOLOGY (2020)
DDX3X Suppresses the Susceptibility of Hindbrain Lineages to Medulloblastoma
Deanna M. Patmore, Amir Jassim, Erica Nathan, Reuben J. Gilbertson, Daniel Tahan, Nadin Hoffmann, Yiai Tong, Kyle S. Smith, Thirumala-Devi Kanneganti, Hiromichi Suzuki, Michael D. Taylor, Paul Northcott, Richard J. Gilbertson
DEVELOPMENTAL CELL (2020)
Comparison of tumor-associated YAP1 fusions identifies a recurrent set of functions critical for oncogenesis
Frank Szulzewsky, Sonali Arora, Pia Hoellerbauer, Claire King, Erica Nathan, Marina Chan, Patrick J. Cimino, Tatsuya Ozawa, Daisuke Kawauchi, Kristian W. Pajtler, Richard J. Gilbertson, Patrick J. Paddison, Valeri Vasioukhin, Taranjit S. Gujral, Eric C. Holland
GENES & DEVELOPMENT (2020)
Harnessing brain development to understand brain tumours
Silvia Marino, Richard J. Gilbertson
DEVELOPMENT (2021)
Outcomes by Clinical and Molecular Features in Children With Medulloblastoma Treated With Risk-Adapted Therapy: Results of an International Phase III Trial (SJMB03)
Amar Gajjar, Giles W. Robinson, Kyle S. Smith, Tong Lin, Thomas E. Merchant, Murali Chintagumpala, Anita Mahajan, Jack Su, Eric Bouffet, Ute Bartels, Tal Schechter, Tim Hassall, Thomas Robertson, Wayne Nicholls, Sridharan Gururangan, Kristin Schroeder, Michael Sullivan, Greg Wheeler, Jordan R. Hansford, Stewart J. Kellie, Geoffrey McCowage, Richard Cohn, Michael J. Fisher, Matthew J. Krasin, Clinton F. Stewart, Alberto Broniscer, Ivo Buchhalter, Ruth G. Tatevossian, Brent A. Orr, Geoff Neale, Paul Klimo, Frederick Boop, Ashok Srinivasan, Stefan M. Pfister, Richard J. Gilbertson, Arzu Onar-Thomas, David W. Ellison, Paul A. Northcott
JOURNAL OF CLINICAL ONCOLOGY (2021)
Maturation Block in Childhood Cancer
Sam Behjati, Richard J. Gilbertson, Stefan M. Pfister
CANCER DISCOVERY (2021)
ZFTA Translocations Constitute Ependymoma Chromatin Remodeling and Transcription Factors
Robert Kupp, Lisa Ruff, Sabrina Terranova, Erica Nathan, Stephane Ballereau, Rory Stark, Chandra Sekhar Reddy Chilamakuri, Nadin Hoffmann, Katherine Wickham-Rahrmann, Marcus Widdess, Amir Arabzade, Yanhua Zhao, Srinidhi Varadharajan, Tuyu Zheng, Mohankumar Murugesan, Stefan M. Pfister, Daisuke Kawauch, Kristian W. Pajtler, Benjamin Deneen, Stephen C. Mack, Katherine E. Masih, Berkley E. Gryder, Javed Khan, Richard J. Gilbertson
CANCER DISCOVERY (2021)
Cross-Species Genomics Reveals Oncogenic Dependencies in ZFTA/C11orf95 Fusion-Positive Supratentorial Ependymomas
Tuyu Zheng, David R. Ghasemi, Konstantin Okonechnikov, Andrey Korshunov, Martin Sill, Kendra K. Maass, Patricia Benites Goncalves da Silva, Marina Ryzhova, Johannes Gojo, Damian Stichel, Amir Arabzade, Robert Kupp, Julia Benzel, Shinichiro Taya, Toma Adachi, Ryo Shiraishi, Nicolas U. Gerber, Dominik Sturm, Jonas Ecker, Philipp Sievers, Florian Selt, Rebecca Chapman, Christine Haberler, Dominique Figarella-Branger, Guido Reifenberger, Gudrun Fleischhack, Stefan Rutkowski, Andrew M. Donson, Vijay Ramaswamy, David Capper, David W. Ellison, Christel C. Herold-Mende, Ulrich Schueller, Sebastian Brandner, Pablo Hernaiz Driever, Johan M. Kros, Matija Snuderl, Till Milde, Richard G. Grundy, Mikio Hoshino, Stephen C. Mack, Richard J. Gilbertson, David T. W. Jones, Marcel Kool, Andreas von Deimling, Stefan M. Pfister, Felix Sahm, Daisuke Kawauchi, Kristian W. Pajtler
CANCER DISCOVERY (2021)
ZFTA-RELA Dictates Oncogenic Transcriptional Programs to Drive Aggressive Supratentorial Ependymoma
Amir Arabzade, Yanhua Zhao, Srinidhi Varadharajan, Hsiao-Chi Chen, Selin Jessa, Bryan Rivas, Austin J. Stuckert, Minerva Solis, Alisha Kardian, Dana Tlais, Brian J. Golbourn, Ann-Catherine J. Stanton, Yuen San Chan, Calla Olson, Kristen L. Karlin, Kathleen Kong, Robert Kupp, Baoli Hu, Sarah G. Injac, Madeline Ngo, Peter R. Wang, Luz A. De Leon, Felix Sahm, Daisuke Kawauchi, Stefan M. Pfister, Charles Y. Lin, H. Courtney Hodges, Irtisha Singh, Thomas F. Westbrook, Murali M. Chintagumpala, Susan M. Blaney, Donald W. Parsons, Kristian W. Pajtler, Sameer Agnihotri, Richard J. Gilbertson, Joanna Yi, Nada Jabado, Claudia L. Kleinman, Kelsey C. Bertrand, Benjamin Deneen, Stephen C. Mack
CANCER DISCOVERY (2021)
Serial assessment of measurable residual disease in medulloblastoma liquid biopsies
Anthony P. Y. Liu, Kyle S. Smith, Rahul Kumar, Leena Paul, Laure Bihannic, Tong Lin, Kendra K. Maass, Kristian W. Pajtler, Murali Chintagumpala, Jack M. Su, Eric Bouffet, Michael J. Fisher, Sridharan Gururangan, Richard Cohn, Tim Hassall, Jordan R. Hansford, Paul Klimo, Frederick A. Boop, Clinton F. Stewart, Julie H. Harreld, Thomas E. Merchant, Ruth G. Tatevossian, Geoffrey Neale, Matthew Lear, Jeffery M. Klco, Brent A. Orr, David W. Ellison, Richard J. Gilbertson, Arzu Onar-Thomas, Amar Gajjar, Giles W. Robinson, Paul A. Northcott
CANCER CELL (2021)
Targeting integrated epigenetic and metabolic pathways in lethal childhood PFA ependymomas
Pooja Panwalkar, Benita Tamrazi, Derek Dang, Chan Chung, Stefan Sweha, Siva Kumar Natarajan, Matthew Pun, Jill Bayliss, Martin P. Ogrodzinski, Drew Pratt, Brendan Mullan, Debra Hawes, Fusheng Yang, Chao Lu, Benjamin R. Sabari, Abhinav Achreja, Jin Heon, Olamide Animasahun, Marcin Cieslik, Christopher Dunham, Stephen Yip, Juliette Hukin, Joanna J. Phillips, Miriam Bornhorst, Andrea M. Griesinger, Andrew M. Donson, Nicholas K. Foreman, Hugh J. L. Garton, Jason Heth, Karin Muraszko, Javad Nazarian, Carl Koschmann, Li Jiang, Mariella G. Filbin, Deepak Nagrath, Marcel Kool, Andrey Korshunov, Stefan M. Pfister, Richard J. Gilbertson, C. David Allis, Arul M. Chinnaiyan, Sophia Y. Lunt, Stefan Bluml, Alexander R. Judkins, Sriram Venneti
SCIENCE TRANSLATIONAL MEDICINE (2021)
The NALCN channel regulates metastasis and nonmalignant cell dissemination
Eric P. Rahrmann, David Shorthouse, Amir Jassim, Linda P. Hu, Mariaestela Ortiz, Betania Mahler-Araujo, Peter Vogel, Marta Paez-Ribes, Atefeh Fatemi, Gregory J. Hannon, Radhika Iyer, Jay A. Blundon, Filipe C. Lourenco, Jonathan Kay, Rosalynn M. Nazarian, Benjamin A. Hall, Stanislav S. Zakharenko, Douglas J. Winton, Liqin Zhu, Richard J. Gilbertson
NATURE GENETICS (2022)
Human fetal cerebellar cell atlas informs medulloblastoma origin and oncogenesis
Zaili Luo, Mingyang Xia, Wei Shi, Chuntao Zhao, Jiajia Wang, Dazhuan Xin, Xinran Dong, Yu Xiong, Feng Zhang, Kalen Berry, Sean Ogurek, Xuezhao Liu, Rohit Rao, Rui Xing, Lai Man Natalie Wu, Siying Cui, Lingli Xu, Yifeng Lin, Wenkun Ma, Shuaiwei Tian, Qi Xie, Li Zhang, Mei Xin, Xiaotao Wang, Feng Yue, Haizi Zheng, Yaping Liu, Charles B. Stevenson, Peter de Blank, John P. Perentesis, Richard J. Gilbertson, Hao Li, Jie Ma, Wenhao Zhou, Michael D. Taylor, Q. Richard Lu
NATURE (2022)
Cancers make their own luck: theories of cancer origins
Amir Jassim, Eric P. Rahrmann, Ben D. Simons, Richard J. Gilbertson
NATURE REVIEWS CANCER (2023)
SMAD4 and KCNQ3 alterations are associated with lymph node metastases in oesophageal adenocarcinoma
Kieran Foley, David Shorthouse, Eric Rahrmann, Lizhe Zhuang, Ginny Devonshire, Rebecca C. OCCAMS Consortium, Rebecca C. Fitzgerald, Benjamin A. Hall
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE (2024)