Technical and implementation issues in using next-generation sequencing of cancers in clinical practice
BRITISH JOURNAL OF CANCER (2013)
期刊
BRITISH JOURNAL OF CANCER
卷 109, 期 4, 页码 827-835出版社
NATURE PUBLISHING GROUP
关键词
类别
资金
- Wellcome Trust [090532] Funding Source: Medline
- Cancer Research UK [16459] Funding Source: researchfish
作者
我是这篇论文的作者
推荐
CRISPR/Cas9 and next generation sequencing in the personalized treatment of Cancer
Sushmaa Chandralekha Selvakumar, K. Auxzilia Preethi, Kehinde Ross, Deusdedit Tusubira, Mohd Wajid Ali Khan, Panagal Mani, Tentu Nageswara Rao, Durairaj Sekar
MOLECULAR CANCER (2022)
Integrative Analysis of Next-Generation Sequencing for Next-Generation Cancer Research toward Artificial Intelligence
Youngjun Park, Dominik Heider, Anne-Christin Hauschild
CANCERS (2021)
ModEst: Accurate estimation of genome size from next generation sequencing data
Markus Pfenninger, Philipp Schoennenbeck, Tilman Schell
MOLECULAR ECOLOGY RESOURCES (2022)
Computational pharmacogenotype extraction from clinical next-generation sequencing
Tyler Shugg, Reynold C. Ly, Wilberforce Osei, Elizabeth J. Rowe, Caitlin A. Granfield, Ty C. Lynnes, Elizabeth B. Medeiros, Jennelle C. Hodge, Amy M. Breman, Bryan P. Schneider, S. Cenk Sahinalp, Ibrahim Numanagic, Benjamin A. Salisbury, Steven M. Bray, Ryan Ratcliff, Todd C. Skaar
FRONTIERS IN ONCOLOGY (2023)
Current Status of Next-Generation Sequencing in Bone Genetic Diseases
Natsuko Aida, Akiko Saito, Toshifumi Azuma
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2023)
Application of next-generation sequencing in the diagnosis of gastric cancer
Narges Moradi, Solmaz Ohadian Moghadam, Siamak Heidarzadeh
SCANDINAVIAN JOURNAL OF GASTROENTEROLOGY (2022)
Identification of Kynurenic Acid-Induced Apoptotic Biomarkers in Gastric Cancer-Derived AGS Cells through Next-Generation Transcriptome Sequencing Analysis
Hun Hwan Kim, Sang Eun Ha, Min Yeong Park, Se Hyo Jeong, Pritam Bhagwan Bhosale, Abuyaseer Abusaliya, Chung Kil Won, Jeong Doo Heo, Meejung Ahn, Je Kyung Seong, Hyun Wook Kim, Gon Sup Kim
NUTRIENTS (2023)
The role of next-generation sequencing in the investigation of ultrasound-identified fetal structural anomalies
M. D. Kilby
BJOG-AN INTERNATIONAL JOURNAL OF OBSTETRICS AND GYNAECOLOGY (2021)
ESREEM: Efficient Short Reads Error Estimation Computational Model for Next-generation Genome Sequencing
Muhammad Tahir, Muhammad Sardaraz, Zahid Mehmood, Muhammad Saud Khan
CURRENT BIOINFORMATICS (2021)
Next Generation Sequencing Technology in Lung Cancer Diagnosis
Calin Cainap, Ovidiu Balacescu, Simona Sorana Cainap, Laura-Ancuta Pop
BIOLOGY-BASEL (2021)
Next Generation Sequencing after Invasive Prenatal Testing in Fetuses with Congenital Malformations: Prenatal or Neonatal Investigation
Alexandra Emms, James Castleman, Stephanie Allen, Denise Williams, Esther Kinning, Mark Kilby
GENES (2022)
Direct Diagnosis of Echovirus 12 Meningitis Using Metagenomic Next Generation Sequencing
Madjid Morsli, Christine Zandotti, Aurelie Morand, Philippe Colson, Michel Drancourt
PATHOGENS (2021)
Human Papillomavirus Detection by Whole-Genome Next-Generation Sequencing: Importance of Validation and Quality Assurance Procedures
Laila Sara Arroyo Muhr, Daniel Guerendiain, Kate Cuschieri, Karin Sundstrom
VIRUSES-BASEL (2021)
Next-generation cancer organoids
Bauer L. LeSavage, Riley A. Suhar, Nicolas Broguiere, Matthias P. Lutolf, Sarah C. Heilshorn
NATURE MATERIALS (2022)
Next generation sequencing in neonatology: what does it mean for the next generation?
Annie Janvier, Keith Barrington, John Lantos
HUMAN GENETICS (2022)
COVID-19 in children with haematological malignancies
Gerard Cathal Millen, Roland Arnold, Jean-Baptiste Cazier, Helen Curley, Richard Feltbower, Ashley Gamble, Adam Glaser, Richard G. Grundy, Laura Kirton, Lennard Y. W. Lee, Martin G. McCabe, Claire Palles, Bob Phillips, Charles A. Stiller, Csilla Varnai, Pamela Kearns
ARCHIVES OF DISEASE IN CHILDHOOD (2022)
Transposable element sequence fragments incorporated into coding and noncoding transcripts modulate the transcriptome of human pluripotent stem cells
Isaac A. Babarinde, Gang Ma, Yuhao Li, Boping Deng, Zhiwei Luo, Hao Liu, Mazid Md Abdul, Carl Ward, Minchun Chen, Xiuling Fu, Liyang Shi, Martha Duttlinger, Jiangping He, Li Sun, Wenjuan Li, Qiang Zhuang, Guoqing Tong, Jon Frampton, Jean-Baptiste Cazier, Jiekai Chen, Ralf Jauch, Miguel A. Esteban, Andrew P. Hutchins
NUCLEIC ACIDS RESEARCH (2021)
Key findings from the UKCCMP cohort of 877 patients with haematological malignancy and COVID-19: disease control as an important factor relative to recent chemotherapy or anti-CD20 therapy
Stephen Booth, Helen M. Curley, Csilla Varnai, Roland Arnold, Lennard Y. W. Lee, Naomi A. Campton, Gordon Cook, Karin Purshouse, James Aries, Andrew Innes, Lucy B. Cook, Oliver Tomkins, Helen S. Oram, Michael Tilby, Austin Kulasekararaj, David Wrench, Saoirse Dolly, Tom Newsom-Davies, Ruth Pettengell, Abigail Gault, Sam Moody, Sajjan Mittal, Mohammed Altohami, Tania Tillet, Jack Illingworth, Leena Mukherjee, Jane Apperly, John Ashcroft, Neil Rabin, Jonathan Carmichael, Jean-Baptiste Cazier, Rachel Kerr, Gary Middleton, Graham P. Collins, Claire Palles
BRITISH JOURNAL OF HAEMATOLOGY (2022)
Recurrence of Papillary Thyroid Cancer: A Systematic Appraisal of Risk Factors
Hannah R. Nieto, Caitlin E. M. Thornton, Katie Brookes, Albert Nobre de Menezes, Alice Fletcher, Mohammed Alshahrani, Merve Kocbiyik, Neil Sharma, Kristien Boelaert, Jean-Baptiste Cazier, Hisham Mehanna, Vicki E. Smith, Martin L. Read, Christopher J. McCabe
JOURNAL OF CLINICAL ENDOCRINOLOGY & METABOLISM (2022)
Targeting Asparagine and Serine Metabolism in Germinal Centre-Derived B Cells Non-Hodgkin Lymphomas (B-NHL)
Zuhal Eraslan, Grigorios Papatzikas, Jean-Baptiste Cazier, Farhat L. Khanim, Ulrich L. Guenther
CELLS (2021)
Mortality Among Adults With Cancer Undergoing Chemotherapy or Immunotherapy and Infected With COVID-19
Csilla Varnai, Claire Palles, Roland Arnold, Helen M. Curley, Karin Purshouse, Vinton W. T. Cheng, Stephen Booth, Naomi A. Campton, Graham P. Collins, Daniel J. Hughes, Austin G. Kulasekararaj, Alvin J. X. Lee, Anna C. Olsson-Brown, Archana Sharma-Oates, Mieke Van Hemelrijck, Lennard Y. W. Lee, Rachel Kerr, Gary Middleton, Jean-Baptiste Cazier
JAMA NETWORK OPEN (2022)
Prognostic Significance of DNA Methylation Profiles at MRI Enhancing Tumor Recurrence: a Report from the EORTC 26091 TAVAREC Trial
Kaspar Draaisma, C. Mircea S. Tesileanu, Iris de Heer, Martin Klein, Marion Smits, Jaap C. Reijneveld, Paul M. Clement, Filip Y. F. de Vos, Antje Wick, Paul J. Mulholland, Martin J. B. Taphoorn, Michael Weller, Olivier L. Chinot, Johan M. Kros, Tina Verschuere, Corneel Coens, Vassilis Golfinopoulos, Thierry Gorlia, Ahmed Idbaih, Pierre A. Robe, Martin J. van den Bent, Pim J. French
CLINICAL CANCER RESEARCH (2022)
TKTL1 Knockdown Impairs Hypoxia-Induced Glucose-6-phosphate Dehydrogenase and Glyceraldehyde-3-phosphate Dehydrogenase Overexpression
Ines Baptista, Effrosyni Karakitsou, Jean-Baptiste Cazier, Ulrich L. Guenther, Silvia Marin, Marta Cascante
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2022)
Radiotherapy combined with nivolumab or temozolomide for newly diagnosed glioblastoma with unmethylated MGMT promoter: An international randomized phase III trial
Antonio Omuro, Alba A. Brandes, Antoine F. Carpentier, Ahmed Idbaih, David A. Reardon, Timothy Cloughesy, Ashley Sumrall, Joachim Baehring, Martin van den Bent, Oliver Bahr, Giuseppe Lombardi, Paul Mulholland, Ghazaleh Tabatabai, Ulrik Lassen, Juan Manuel Sepulveda, Mustafa Khasraw, Elodie Vauleon, Yoshihiro Muragaki, Anna Maria Di Giacomo, Nicholas Butowski, Patrick Roth, Xiaozhong Qian, Alex Z. Fu, Yanfang Liu, Von Potter, Alexandros-Georgios Chalamandaris, Kay Tatsuoka, Michael Lim, Michael Weller
NEURO-ONCOLOGY (2023)
Combined exome and transcriptome sequencing of non-muscle-invasive bladder cancer: associations between genomic changes, expression subtypes, and clinical outcomes
Anshita Goel, Douglas G. Ward, Boris Noyvert, Minghao Yu, Naheema S. Gordon, Ben Abbotts, John K. Colbourne, Stephen Kissane, Nicholas D. James, Maurice P. Zeegers, Kar Keung Cheng, Jean-Baptiste Cazier, Celina M. Whalley, Andrew D. Beggs, Claire Palles, Roland Arnold, Richard T. Bryan
GENOME MEDICINE (2022)
Survival Outcomes and Prognostic Factors in Glioblastoma
Nicholas F. Brown, Diego Ottaviani, John Tazare, John Gregson, Neil Kitchen, Sebastian Brandner, Naomi Fersht, Paul Mulholland
CANCERS (2022)
Crosstalk between AML and stromal cells triggers acetate secretion through the metabolic rewiring of stromal cells
Nuria Vilaplana-Lopera, Vincent Cuminetti, Ruba Almaghrabi, Grigorios Papatzikas, Ashok Kumar Rout, Mark Jeeves, Elena Gonzalez, Yara Alyahyawi, Alan Cunningham, Aysegul Erdem, Frank Schnutgen, Manoj Raghavan, Sandeep Potluri, Jean-Baptiste Cazier, Jan Jacob Schuringa, Michelle A. C. Reed, Lorena Arranz, Ulrich L. Guenther, Paloma Garcia
ELIFE (2022)
Metabolic-imaging of human glioblastoma live tumors: A new precision-medicine approach to predict tumor treatment response early
Mariangela Morelli, Francesca Lessi, Serena Barachini, Romano Liotti, Nicola Montemurro, Paolo Perrini, Orazio Santo Santonocito, Carlo Gambacciani, Matija Snuderl, Francesco Pieri, Filippo Aquila, Azzurra Farnesi, Antonio Giuseppe Naccarato, Paolo Viacava, Francesco Cardarelli, Gianmarco Ferri, Paul Mulholland, Diego Ottaviani, Fabiola Paiar, Gaetano Liberti, Francesco Pasqualetti, Michele Menicagli, Paolo Aretini, Giovanni Signore, Sara Franceschi, Chiara Maria Mazzanti
FRONTIERS IN ONCOLOGY (2022)
Association of Autologous Tumor Lysate-Loaded Dendritic Cell Vaccination With Extension of Survival Among Patients With Newly Diagnosed and Recurrent Glioblastoma A Phase 3 Prospective Externally Controlled Cohort Trial
Linda M. Liau, Keyoumars Ashkan, Steven Brem, Jian L. Campian, John E. Trusheim, Fabio M. Iwamoto, David D. Tran, George Ansstas, Charles S. Cobbs, Jason A. Heth, Michael E. Salacz, Stacy D'Andre, Robert D. Aiken, Yaron A. Moshel, Joo Y. Nam, Clement P. Pillainayagam, Stephanie A. Wagner, Kevin A. Walter, Rekha Chaudary, Samuel A. Goldlust, Ian Y. Lee, Daniela A. Bota, Heinrich Elinzano, Jai Grewal, Kevin Lillehei, Tom Mikkelsen, Tobias Walbert, Steven Abram, Andrew J. Brenner, Matthew G. Ewend, Simon Khagi, Darren S. Lovick, Jana Portnow, Lyndon Kim, William G. Loudon, Nina L. Martinez, Reid C. Thompson, David E. Avigan, Karen L. Fink, Francois J. Geoffroy, Pierre Giglio, Oleg Gligich, Dietmar Krex, Scott M. Lindhorst, Jose Lutzky, Hans-Jorg Meisel, Minou Nadji-Ohl, Lhagva Sanchin, Andrew Sloan, Lynne P. Taylor, Julian K. Wu, Erin M. Dunbar, Arnold B. Etame, Santosh Kesari, David Mathieu, David E. Piccioni, David S. Baskin, Michel Lacroix, Sven-Axel May, Pamela Z. New, Timothy J. Pluard, Steven A. Toms, Victor Tse, Scott Peak, John L. Villano, James D. Battiste, Paul J. Mulholland, Michael L. Pearlman, Kevin Petrecca, Michael Schulder, Robert M. Prins, Alton L. Boynton, Marnix L. Bosch
JAMA ONCOLOGY (2023)
Interdisciplinary and Transferable Concepts in Bioinformatics Education: Observations and Approaches From a UK MSc Course
Iain G. G. Johnston, Mark Slater, Jean-Baptiste Cazier
FRONTIERS IN EDUCATION (2022)