4.5 Article

Rigidity and flexibility of biological networks

期刊

BRIEFINGS IN FUNCTIONAL GENOMICS
卷 11, 期 6, 页码 443-456

出版社

OXFORD UNIV PRESS
DOI: 10.1093/bfgp/els023

关键词

structural; combinatorial rigidity; protein structure; thermostability; cytoskeleton; functional flexibility; cellular networks

资金

  1. Hungarian National Science Foundation [OTKA K83314]
  2. Hungarian National Research Initiative [TAMOP-4.2.2/B-10/1-2010-0013]
  3. Rockefeller Foundation Bellagio Center

向作者/读者索取更多资源

The network approach became a widely used tool to understand the behaviour of complex systems in the last decade. We start from a short description of structural rigidity theory. A detailed account on the combinatorial rigidity analysis of protein structures, as well as local flexibility measures of proteins and their applications in explaining allostery and thermostability is given. We also briefly discuss the network aspects of cytoskeletal tensegrity. Finally, we show the importance of the balance between functional flexibility and rigidity in protein-protein interaction, metabolic, gene regulatory and neuronal networks. Our summary raises the possibility that the concepts of flexibility and rigidity can be generalized to all networks.

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