Random forest Gini importance favours SNPs with large minor allele frequency: impact, sources and recommendations

Letter to the Editor: On the stability and ranking of predictors from random forest variable importance measures

(2011) K. K. Nicodemus   BRIEFINGS IN BIOINFORMATICS

A genome-wide screen of gene–gene interactions for rheumatoid arthritis susceptibility

(2011) Chunyu Liu et al.   HUMAN GENETICS

Ranking causal variants and associated regions in genome-wide association studies by the support vector machine and random forest

(2011) Usman Roshan et al.   NUCLEIC ACIDS RESEARCH

On safari to Random Jungle: a fast implementation of Random Forests for high-dimensional data

(2010) Daniel F. Schwarz et al.   BIOINFORMATICS

Letter to the Editor: Stability of Random Forest importance measures

(2010) M. L. Calle et al.   BRIEFINGS IN BIOINFORMATICS

A screening methodology based on Random Forests to improve the detection of gene–gene interactions

(2010) Lizzy De Lobel et al.   EUROPEAN JOURNAL OF HUMAN GENETICS

Supervised machine learning and logistic regression identifies novel epistatic risk factors with PTPN22 for rheumatoid arthritis

(2010) F B S Briggs et al.   GENES AND IMMUNITY

Integrating common and rare genetic variation in diverse human populations

(2010)   NATURE

Molecular Reclassification of Crohn's Disease by Cluster Analysis of Genetic Variants

(2010) Isabelle Cleynen et al.   PLoS One

Conditional Variable Importance for Random Forests

(2008) Carolin Strobl et al.   BMC BIOINFORMATICS

Analysis of the individual and aggregate genetic contributions of previously identified serine peptidase inhibitor Kazal type 5 (SPINK5), kallikrein-related peptidase 7 (KLK7), and filaggrin (FLG) polymorphisms to eczema risk

(2008) Stephan Weidinger et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY