Rhizosphere interactions: root exudates, microbes, and microbial communities

Soil microbiomes vary in their ability to confer drought tolerance to Arabidopsis

(2013) Gaston Zolla et al.   APPLIED SOIL ECOLOGY

Comparative metatranscriptomics reveals kingdom level changes in the rhizosphere microbiome of plants

(2013) Thomas R Turner et al.   ISME Journal

Rhizosphere microbiome assemblage is affected by plant development

(2013) Jacqueline M Chaparro et al.   ISME Journal

Application of Natural Blends of Phytochemicals Derived from the Root Exudates ofArabidopsisto the Soil Reveal That Phenolic-related Compounds Predominantly Modulate the Soil Microbiome

(2013) Dayakar V. Badri et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Changes in Rice Allelopathy and Rhizosphere Microflora by Inhibiting Rice Phenylalanine Ammonia-lyase Gene Expression

(2013) Changxun Fang et al.   JOURNAL OF CHEMICAL ECOLOGY

Potential impact of soil microbiomes on the leaf metabolome and on herbivore feeding behavior

(2013) Dayakar V. Badri et al.   NEW PHYTOLOGIST

Phytochemical analysis of mature tree root exudates in situ and their role in shaping soil microbial communities in relation to tree N-acquisition strategy

(2013) Serge Michalet et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Root Exudation of Phytochemicals in Arabidopsis Follows Specific Patterns That Are Developmentally Programmed and Correlate with Soil Microbial Functions

(2013) Jacqueline M. Chaparro et al.   PLoS One

Activation of the Jasmonic Acid Plant Defence Pathway Alters the Composition of Rhizosphere Bacterial Communities

(2013) Lilia C. Carvalhais et al.   PLoS One

Root Exudates from Grafted-Root Watermelon Showed a Certain Contribution in Inhibiting Fusarium oxysporum f. sp. niveum

(2013) Ning Ling et al.   PLoS One

Diversity and heritability of the maize rhizosphere microbiome under field conditions

(2013) J. A. Peiffer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Arabinogalactan proteins in root–microbe interactions

(2013) Eric Nguema-Ona et al.   TRENDS IN PLANT SCIENCE

Manipulating the soil microbiome to increase soil health and plant fertility

(2012) Jacqueline M. Chaparro et al.   BIOLOGY AND FERTILITY OF SOILS

Artificially applied vanillic acid changed soil microbial communities in the rhizosphere of cucumber (Cucumis sativus L.)

(2012) Xingang Zhou et al.   CANADIAN JOURNAL OF SOIL SCIENCE

The major facilitator superfamily (MFS) revisited

(2012) Vamsee S. Reddy et al.   FEBS Journal

Fungal communities influence root exudation rates in pine seedlings

(2012) Ina C. Meier et al.   FEMS MICROBIOLOGY ECOLOGY

Mechanisms for cellular transport and release of allelochemicals from plant roots into the rhizosphere

(2012) L. A. Weston et al.   JOURNAL OF EXPERIMENTAL BOTANY

Identification of Chemotaxis Sensory Proteins for Amino Acids in Pseudomonas fluorescens Pf0-1 and Their Involvement in Chemotaxis to Tomato Root Exudate and Root Colonization

(2012) Shota Oku et al.   MICROBES AND ENVIRONMENTS

Effects of Bacterial ACC Deaminase on Brassica napus Gene Expression

(2012) Jennifer C. Stearns et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Defining the core Arabidopsis thaliana root microbiome

(2012) Derek S. Lundberg et al.   NATURE

Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota

(2012) Davide Bulgarelli et al.   NATURE

Harnessing the rhizosphere microbiome through plant breeding and agricultural management

(2012) Matthew G. Bakker et al.   PLANT AND SOIL

RhizobacteriaBacillus subtilisrestricts foliar pathogen entry through stomata

(2012) Amutha Sampath Kumar et al.   PLANT JOURNAL

Effect of Arabinogalactan Proteins from the Root Caps of Pea and Brassica napus on Aphanomyces euteiches Zoospore Chemotaxis and Germination

(2012) M. A. Cannesan et al.   PLANT PHYSIOLOGY

Benzoxazinoids in Root Exudates of Maize Attract Pseudomonas putida to the Rhizosphere

(2012) Andrew L. Neal et al.   PLoS One

p-Coumaric Acid Influenced Cucumber Rhizosphere Soil Microbial Communities and the Growth of Fusarium oxysporum f.sp. cucumerinum Owen

(2012) Xingang Zhou et al.   PLoS One

Carbon availability triggers fungal nitrogen uptake and transport in arbuscular mycorrhizal symbiosis

(2012) C. R. Fellbaum et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Endophytic Insect-Parasitic Fungi Translocate Nitrogen Directly from Insects to Plants

(2012) S. W. Behie et al.   SCIENCE

The rhizosphere microbiome and plant health

(2012) Roeland L. Berendsen et al.   TRENDS IN PLANT SCIENCE

Impact of root exudates and plant defense signaling on bacterial communities in the rhizosphere. A review

(2011) Rogier F. Doornbos et al.   Agronomy for Sustainable Development

Strigolactones regulate protonema branching and act as a quorum sensing-like signal in the moss Physcomitrella patens

(2011) H. Proust et al.   DEVELOPMENT

A Rice Phenolic Efflux Transporter Is Essential for Solubilizing Precipitated Apoplasmic Iron in the Plant Stele

(2011) Yasuhiro Ishimaru et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Soil and Cultivar Type Shape the Bacterial Community in the Potato Rhizosphere

(2011) Özgül İnceoğlu et al.   MICROBIAL ECOLOGY

A Plant Arabinogalactan-Like Glycoprotein Promotes a Novel Type of Polar Surface Attachment byRhizobium leguminosarum

(2011) Fang Xie et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Modulation of Host Immunity by Beneficial Microbes

(2011) Christos Zamioudis et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Comparative Analysis of Bacterial Communities in a Potato Field as Determined by Pyrosequencing

(2011) Özgül İnceoğlu et al.   PLoS One

Deciphering the Rhizosphere Microbiome for Disease-Suppressive Bacteria

(2011) R. Mendes et al.   SCIENCE

Reciprocal Rewards Stabilize Cooperation in the Mycorrhizal Symbiosis

(2011) E. T. Kiers et al.   SCIENCE

Evidence for leaf endophyte regulation of root symbionts: effect of Neotyphodium endophytes on the pre-infective state of mycorrhizal fungi

(2011) M. Victoria Novas et al.   SYMBIOSIS

Root Secretion of Defense-related Proteins Is Development-dependent and Correlated with Flowering Time

(2010) Clelia De-la-Peña et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Mrt, a Gene Unique to Fungi, Encodes an Oligosaccharide Transporter and Facilitates Rhizosphere Competency in Metarhizium robertsii

(2010) W. Fang et al.   PLANT PHYSIOLOGY

In situ dynamics of soil fungal communities under different genotypes of potato, including a genetically modified cultivar

(2010) S.E. Hannula et al.   SOIL BIOLOGY & BIOCHEMISTRY

Pathogenesis, parasitism and mutualism in the trophic space of microbe–plant interactions

(2010) Adrian C. Newton et al.   TRENDS IN MICROBIOLOGY

Plant-Growth-Promoting Rhizobacteria

(2009) Ben Lugtenberg et al.   Annual Review of Microbiology

Plant–microbe interactions promoting plant growth and health: perspectives for controlled use of microorganisms in agriculture

(2009) Gabriele Berg   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Response of alfalfa (Medicago sativa L.) to single and mixed inoculation with phosphate-solubilizing bacteria and Sinorhizobium meliloti

(2009) Lorena Belén Guiñazú et al.   BIOLOGY AND FERTILITY OF SOILS

Rhizosphere chemical dialogues: plant–microbe interactions

(2009) Dayakar V Badri et al.   CURRENT OPINION IN BIOTECHNOLOGY

Elevated CO2and nitrogen influence exudation of soluble organic compounds by ectomycorrhizal root systems

(2009) Petra M.A. Fransson et al.   FEMS MICROBIOLOGY ECOLOGY

Influence of Arabidopsis thaliana accessions on rhizobacterial communities and natural variation in root exudates

(2009) Shirley A. Micallef et al.   JOURNAL OF EXPERIMENTAL BOTANY

Plant lectins: the ties that bind in root symbiosis and plant defense

(2009) Peter L. De Hoff et al.   MOLECULAR GENETICS AND GENOMICS

Host legume-exuded antimetabolites optimize the symbiotic rhizosphere

(2009) Tao Cai et al.   MOLECULAR MICROBIOLOGY

Regulation and function of root exudates

(2009) DAYAKAR V. BADRI et al.   PLANT CELL AND ENVIRONMENT

An ABC Transporter Mutation Alters Root Exudation of Phytochemicals That Provoke an Overhaul of Natural Soil Microbiota

(2009) D. V. Badri et al.   PLANT PHYSIOLOGY

Plant growth-promoting bacteria in the rhizo- and endosphere of plants: Their role, colonization, mechanisms involved and prospects for utilization

(2009) Stéphane Compant et al.   SOIL BIOLOGY & BIOCHEMISTRY

Pseudomonas putida KT2440 causes induced systemic resistance and changes in Arabidopsis root exudation

(2009) Miguel A. Matilla et al.   Environmental Microbiology Reports

Influence of plant developmental stage on microbial community structure and activity in the rhizosphere of three field crops

(2008) Ashley Houlden et al.   FEMS MICROBIOLOGY ECOLOGY

Root-Microbe Communication through Protein Secretion

(2008) Clelia De-la-Peña et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Comparative proteomic studies of root–microbe interactions

(2008) Ulrike Mathesius   Journal of Proteomics

Strigolactones, host recognition signals for root parasitic plants and arbuscular mycorrhizal fungi, from Fabaceae plants

(2008) Kaori Yoneyama et al.   NEW PHYTOLOGIST

Inoculation with Pseudomonas spp. Containing ACC-Deaminase Partially Eliminates the Effects of Drought Stress on Growth, Yield, and Ripening of Pea (Pisum sativum L.)

(2008) M. ARSHAD et al.   PEDOSPHERE

Effect of soil type and soybean genotype on fungal community in soybean rhizosphere during reproductive growth stages

(2008) Guanghua Wang et al.   PLANT AND SOIL

The rhizosphere: a playground and battlefield for soilborne pathogens and beneficial microorganisms

(2008) Jos M. Raaijmakers et al.   PLANT AND SOIL

Aluminum-activated citrate and malate transporters from the MATE and ALMT families function independently to confer Arabidopsis aluminum tolerance

(2008) Jiping Liu et al.   PLANT JOURNAL

Flavones and flavonols play distinct critical roles during nodulation ofMedicago truncatulabySinorhizobium meliloti

(2008) Juan Zhang et al.   PLANT JOURNAL

Root-Secreted Malic Acid Recruits Beneficial Soil Bacteria

(2008) T. Rudrappa et al.   PLANT PHYSIOLOGY

Bacterial communities in soybean rhizosphere in response to soil type, soybean genotype, and their growth stage

(2008) Yanxia Xu et al.   SOIL BIOLOGY & BIOCHEMISTRY

Rhizosphere bacteria help plants tolerate abiotic stress

(2008) Jungwook Yang et al.   TRENDS IN PLANT SCIENCE