Inference of dynamical gene-regulatory networks based on time-resolved multi-stimuli multi-experiment data applying NetGenerator V2.0

A computational framework for gene regulatory network inference that combines multiple methods and datasets

(2011) Rita Gupta et al.   BMC Systems Biology

On the way toward systems biology of Aspergillus fumigatus infection

(2011) Daniela Albrecht et al.   INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY

Regulatory network modelling of iron acquisition by a fungal pathogen in contact with epithelial cells

(2010) Jörg Linde et al.   BMC Systems Biology

Identification of SOX9 Interaction Sites in the Genome of Chondrocytes

(2010) Chun-do Oh et al.   PLoS One

Integrative modeling of transcriptional regulation in response to antirheumatic therapy

(2009) Michael Hecker et al.   BMC BIOINFORMATICS

BioMart – biological queries made easy

(2009) Damian Smedley et al.   BMC GENOMICS

Osteo-transcriptomics of human mesenchymal stem cells: Accelerated gene expression and osteoblast differentiation induced by vitamin D reveals c-MYC as an enhancer of BMP2-induced osteogenesis

(2009) Ester Piek et al.   BONE

Transcriptional networks controlling skeletal development

(2009) Christine Hartmann   CURRENT OPINION IN GENETICS & DEVELOPMENT

Sox9 directly promotes Bapx1 gene expression to repress Runx2 in chondrocytes

(2009) Satoshi Yamashita et al.   EXPERIMENTAL CELL RESEARCH

Gene regulatory network inference: Data integration in dynamic models—A review

(2008) Michael Hecker et al.   BIOSYSTEMS

Herpes Simplex Virus-Mediated Expression of Pax3 and MyoD in Embryoid Bodies Results in Lineage-Related Alterations in Gene Expression Profiles

(2008) April M. Craft et al.   STEM CELLS