4.6 Article

Proteomic profiling of Pseudomonas aeruginosa AES-1R, PAO1 and PA14 reveals potential virulence determinants associated with a transmissible cystic fibrosis-associated strain

期刊

BMC MICROBIOLOGY
卷 12, 期 -, 页码 -

出版社

BIOMED CENTRAL LTD
DOI: 10.1186/1471-2180-12-16

关键词

-

资金

  1. National Health and Medical Research Council of Australia [NHMRC 632788]
  2. NHMRC
  3. Australian Cystic Fibrosis Research Trust (ACFRT)
  4. Australian Postgraduate Award

向作者/读者索取更多资源

Background: Pseudomonas aeruginosa is an opportunistic pathogen that is the major cause of morbidity and mortality in patients with cystic fibrosis (CF). While most CF patients are thought to acquire P. aeruginosa from the environment, person-person transmissible strains have been identified in CF clinics worldwide. The molecular basis for transmissibility and colonization of the CF lung remains poorly understood. Results: A dual proteomics approach consisting of gel-based and gel-free comparisons were undertaken to analyse protein profiles in a transmissible, early (acute) isolate of the Australian epidemic strain 1 (AES-1R), the virulent burns/wound isolate PA14, and the poorly virulent, laboratory-associated strain PAO1. Over 1700 P. aeruginosa proteins were confidently identified. AES-1R protein profiles revealed elevated abundance of proteins associated with virulence and siderophore biosynthesis and acquisition, antibiotic resistance and lipopolysaccharide and fatty acid biosynthesis. The most abundant protein in AES-1R was confirmed as a previously hypothetical protein with sequence similarity to carbohydrate-binding proteins and database search revealed this gene is only found in the CF-associated strain PA2192. The link with CF infection may suggest that transmissible strains have acquired an ability to rapidly interact with host mucosal glycoproteins. Conclusions: Our data suggest that AES-1R expresses higher levels of proteins, such as those involved in antibiotic resistance, iron acquisition and virulence that may provide a competitive advantage during early infection in the CF lung. Identification of novel proteins associated with transmissibility and acute infection may aid in deciphering new strategies for intervention to limit P. aeruginosa infections in CF patients.

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.6
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

Article Psychology, Clinical

The effect of sertraline on emotional processing: secondary analyses of the PANDA randomised controlled trial

Norin Ahmed, Jessica K. Bone, Gemma Lewis, Nick Freemantle, Catherine J. Harmer, Larisa Duffy, Glyn Lewis

Summary: The study did not find evidence that sertraline alters positive or negative recall in patients with depressive symptoms early in treatment, challenging assumptions of the cognitive neuropsychological model of antidepressant action.

PSYCHOLOGICAL MEDICINE (2022)

Article Biochemistry & Molecular Biology

A translational perspective on the anti-anhedonic effect of ketamine and its neural underpinnings

Erdem Pulcu, Calum Guinea, Philip J. Cowen, Susannah E. Murphy, Catherine J. Harmer

Summary: This article summarizes the role of the habenula in regulating the expression of anhedonia and discusses the modulatory effect of ketamine on this circuitry. It suggests that experimental paradigms based on reinforcement learning and value-based decision-making can be useful in exploring this network to elucidate the mechanisms underlying ketamine's rapid antidepressant action.

MOLECULAR PSYCHIATRY (2022)

Article Neurosciences

Associations Between Statin Use and Negative Affective Bias During COVID-19: An Observational, Longitudinal UK Study Investigating Depression Vulnerability

Amy L. Gillespie, Chloe Wigg, Indra Van Assche, Susannah E. Murphy, Catherine J. Harmer

Summary: This study found an association between statin use and reduced psychological vulnerability to depression. Long-term use of statins may be a potential prophylactic treatment for depression.

BIOLOGICAL PSYCHIATRY (2022)

Article Infectious Diseases

Complete genome of the extensively antibiotic-resistant GC1 Acinetobacter baumannii isolate MRSN 56 reveals a novel route to fluoroquinolone resistance

Christopher J. Harmer, Francois Lebreton, Jason Stam, Patrick T. McGann, Ruth M. Hall

Summary: This study examines the causes of antibiotic resistance in the extensively resistant global clone 1 (GC1) Acinetobacter baumannii isolate MRSN 56. The study identified acquired resistance genes at different locations in the chromosome and discovered a new sublineage of GC1 lineage 1 with novel features. The involvement of the mar operon in fluoroquinolone resistance was also noted for the first time.

JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2022)

Article Genetics & Heredity

Evolution of Acinetobacter baumannii plasmids carrying the oxa58 carbapenemase resistance gene via plasmid fusion, IS26-mediated events and dif module shuffling

Naomi I. Jones, Christopher J. Harmer, Mohammad Hamidian, Ruth M. Hall

Summary: The plasmids from global clone isolates in Greece and Italy were found to have a common ancestor through gene recombination. Factors such as IS26-mediated events, recombination between pdif sites, and homologous recombination have contributed to the evolution and divergence of these plasmids. Gene duplications and losses have been detected, and experimental evidence supports these events.

PLASMID (2022)

Article Multidisciplinary Sciences

Simultaneous monitoring of eight human respiratory viruses including SARS-CoV-2 using liquid chromatography-tandem mass spectrometry

Christopher Hodgkins, Laura K. Buckton, Gregory J. Walker, Ben Crossett, Stuart J. Cordwell, Andrea R. Horvath, William D. Rawlinson

Summary: Diagnosis of SARS-CoV-2 infection has primarily relied on RT-PCR and serology, but LC-MS/MS has the potential to provide supplemental data about the presence of viral proteins and improve the diagnosis of viral infection. Researchers developed a proteomics workflow using serum-free culture conditions and successfully detected target virus peptides in clinical samples using LC-MS/MS. This method is an important step towards the use of LC-MS/MS in viral infection diagnosis.

SCIENTIFIC REPORTS (2022)

Article Multidisciplinary Sciences

Positive and negative personality descriptors: UK dataset of self-referential valence, imageability and subjective frequency ratings of 300 adjectives for use in cognitive-emotional tasks

Andreea Raslescu, Sophie Kreicker, Amy L. Gillespie, William Berners-Lee, Susannah E. Murphy, Catherine J. Harmer

Summary: This study provides a dataset of subjective ratings for 150 positive and 150 negative adjectives describing personality characteristics, in order to facilitate word selection and matching in the development of cognitive-emotional tasks. Representative samples of 200 UK-based, English-speaking adults rated the 300 words on self-referential valence, imageability, and subjective frequency through online surveys. Data cleaning and statistical analysis were performed in R. The findings may be particularly relevant for researchers using self-referential cognitive tasks with UK-based samples.

DATA IN BRIEF (2023)

Article Infectious Diseases

Characterisation of an early South African multiply antibiotic-resistant global clone 1 Acinetobacter baumannii isolate

Stephanie J. Ambrose, Pierre Ibri, Christopher J. Harmer, Carol H. Pong, Ruth M. Hall

Summary: The study aimed to characterize an early clinical multiply antibiotic resistant Acinetobacter baumannii global clone 1 (GC1) isolate from Africa. The draft genome sequence of LUH6050 isolate was determined and compared to other early GC1 isolates, revealing the presence of multiple antibiotic resistance genes and plasmids. These data contribute to the understanding of the emergence, evolution, and dissemination of the A. baumannii GC1 clonal complex.

JOURNAL OF GLOBAL ANTIMICROBIAL RESISTANCE (2023)

Article Genetics & Heredity

Insertion sequences related to ISAjo2 target pdif and dif sites and belong to a new IS family, the IS1202 family

Christopher J. Harmer, Carol H. Pong, Ruth M. Hall

Summary: Several insertion sequences (IS) showing target specificity were found in various Acinetobacter species. These IS are located near dif modules in plasmids and chromosomal dif sites, and encode a transposase that generates target site duplications (TSDs). The IS identified in the IS1202 group form a distinct family, and other IS in this group have different TSD lengths and may also target dif-like sites.

MICROBIAL GENOMICS (2023)

Article Microbiology

Identification of an Outbreak Cluster of Extensively Antibiotic-Resistant GC1 Acinetobacter baumannii Isolates in US Military Treatment Facilities

Ting L. Luo, Christopher J. Harmer, Francois Lebreton, Jason Stam, Jason W. Bennett, Ruth M. Hall, Patrick T. Mc Gann

Summary: A. baumannii is a significant nosocomial pathogen, especially when resistant to carbapenems. Outbreaks linked to this pathogen are reported globally, especially during times of societal upheaval. This study identified an outbreak of extensively antibiotic-resistant A. baumannii strain in three military treatment facilities.

MICROBIOLOGY SPECTRUM (2023)

Article Biochemical Research Methods

Global Acetylomics of Campylobacter jejuni Shows Lysine Acetylation Regulates CadF Adhesin Processing and Human Fibronectin Binding

Ashleigh L. Dale, Lok Man, Stuart J. Cordwell

Summary: Lysine acetylation is a reversible post-translational modification that plays a dynamic role in bile resistance and bacterial protein function. The study identified a large number of acetylated lysines in the gastrointestinal pathogen Campylobacter jejuni, with potential implications for its interaction with fibronectin.

JOURNAL OF PROTEOME RESEARCH (2023)

Article Microbiology

Acinetobacter baumannii GC2 Sublineage Carrying the aac(6')-Im Amikacin, Netilmicin, and Tobramycin Resistance Gene Cassette

Christopher J. J. Harmer, Steven J. J. Nigro, Ruth M. M. Hall

Summary: The aminoglycoside resistance gene aac(6')-Im is prevalent in the globally distributed resistant clones of Acinetobacter baumannii. It commonly coexists with the gene aacC1 in the global clone 2 (GC2) of A. baumannii. Understanding the dissemination and evolution of aac(6')-Im gene is important for tracking specific lineages and sublineages formation.

MICROBIOLOGY SPECTRUM (2023)

Article Microbiology

The RuvABC Holliday Junction Processing System Is Not Required for IS26-Mediated Targeted Conservative Cointegrate Formation

Carol H. Pong, Jade E. Peace, Christopher J. Harmer, Ruth M. Hall

Summary: In Gram-negative bacteria, the contribution of IS26 to the spread of antibiotic resistance and other genes is significant due to its unique mechanistic features, such as causing deletion of adjacent DNA segments and using two distinct reaction modes for cointegrate formation. The high frequency of the targeted conservative reaction mode is also crucial for its spread. However, the detailed mechanism of this reaction and the role of the RuvABC system in HJ resolution still need further investigation.

MICROBIOLOGY SPECTRUM (2023)

Article Biochemistry & Molecular Biology

Viral Biomarker Detection and Validation Using MALDI Mass Spectrometry Imaging (MSI)

Matthew B. O'Rourke, Ben R. Roediger, Christopher J. Jolly, Ben Crossett, Matthew P. Padula, Phillip M. Hansbro

Summary: In this study, a hybrid bioinformatic/image-based method was developed for the identification and validation of viral biomarkers. This method leverages the power of mass spectrometry imaging and provides confident identifications for viral proteins without requiring MS/MS.

PROTEOMES (2022)

Article Microbiology

Variants of Tn6924, a Novel Tn7 Family Transposon Carrying the blaNDM Metallo-β-Lactamase and 14 Copies of the aphA6 Amikacin Resistance Genes Found in Acinetobacter baumannii

Riti Mann, Rayane Rafei, Cindy Gunawan, Christopher J. Harmer, Mohammad Hamidian

Summary: Carbapenem resistance in Acinetobacter baumannii is primarily due to the global spread of two main clones that carry oxa23, oxa24, and oxa58. However, new carbapenem-resistant clones are emerging that are also resistant to a wide range of antibiotics.

MICROBIOLOGY SPECTRUM (2022)

暂无数据