RNA-Seq analysis of the multipartite genome of Rhizobium etli CE3 shows different replicon contributions under heat and saline shock

Global mapping of transcription start sites and promoter motifs in the symbiotic α-proteobacterium Sinorhizobium meliloti 1021

(2013) Jan-Philip Schlüter et al.   BMC GENOMICS

Canonical and non-canonical EcfG sigma factors control the general stress response inRhizobium etli

(2013) Ann Jans et al.   MicrobiologyOpen

Proteomic profiling of Rhizobium tropici PRF 81: identification of conserved and specific responses to heat stress

(2012) Douglas Gomes et al.   BMC MICROBIOLOGY

Dual RpoH Sigma Factors and Transcriptional Plasticity in a Symbiotic Bacterium

(2012) Melanie J. Barnett et al.   JOURNAL OF BACTERIOLOGY

Convergence of the Transcriptional Responses to Heat Shock and Singlet Oxygen Stresses

(2012) Yann S. Dufour et al.   PLoS Genetics

Differential expression in RNA-seq: A matter of depth

(2011) S. Tarazona et al.   GENOME RESEARCH

Small RNA-mediated control of the Agrobacterium tumefaciens GABA binding protein

(2011) Ina Wilms et al.   MOLECULAR MICROBIOLOGY

From RNA-seq reads to differential expression results

(2011) Alicia Oshlack et al.   GENOME BIOLOGY

Genome-wide detection of predicted non-coding RNAs in Rhizobium etli expressed during free-living and host-associated growth using a high-resolution tiling array

(2010) Maarten Vercruysse et al.   BMC GENOMICS

Overlapping Alternative Sigma Factor Regulons in the Response to Singlet Oxygen in Rhodobacter sphaeroides

(2010) A. M. Nuss et al.   JOURNAL OF BACTERIOLOGY

Spatial organization of the flow of genetic information in bacteria

(2010) Paula Montero Llopis et al.   NATURE

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Activation of gene expression by small RNA

(2009) Kathrin S. Fröhlich et al.   CURRENT OPINION IN MICROBIOLOGY

The nodC, nodG, and glgX genes of Rhizobium tropici strain PRF 81

(2009) Luciana Ruano Oliveira et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Role of the Extracytoplasmic Function Sigma Factor RpoE4 in Oxidative and Osmotic Stress Responses in Rhizobium etli

(2009) J. M. Martinez-Salazar et al.   JOURNAL OF BACTERIOLOGY

The PhyR-σEcfGsignalling cascade is involved in stress response and symbiotic efficiency inBradyrhizobium japonicum

(2009) Benjamin Gourion et al.   MOLECULAR MICROBIOLOGY

The structural biology of type IV secretion systems

(2009) Rémi Fronzes et al.   NATURE REVIEWS MICROBIOLOGY

A Strand-Specific RNA–Seq Analysis of the Transcriptome of the Typhoid Bacillus Salmonella Typhi

(2009) Timothy T. Perkins et al.   PLoS Genetics

Molecular Basis for Regulation of the Heat Shock Transcription Factor σ32 by the DnaK and DnaJ Chaperones

(2008) Fernanda Rodriguez et al.   MOLECULAR CELL