AlgaePath: comprehensive analysis of metabolic pathways using transcript abundance data from next-generation sequencing in green algae

Three Acyltransferases and Nitrogen-responsive Regulator Are Implicated in Nitrogen Starvation-induced Triacylglycerol Accumulation inChlamydomonas

(2012) Nanette R. Boyle et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Impact of Oxidative Stress on Ascorbate Biosynthesis inChlamydomonasvia Regulation of theVTC2Gene Encoding a GDP-l-galactose Phosphorylase

(2012) Eugen I. Urzica et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Oil accumulation is controlled by carbon precursor supply for fatty acid synthesis in Chlamydomonas reinhardtii

(2012) Jilian Fan et al.   PLANT AND CELL PHYSIOLOGY

Transcriptome-Wide Changes in Chlamydomonas reinhardtii Gene Expression Regulated by Carbon Dioxide and the CO2-Concentrating Mechanism Regulator CIA5/CCM1

(2012) W. Fang et al.   PLANT CELL

SINGLET OXYGEN RESISTANT 1 links reactive electrophile signaling to singlet oxygen acclimation in Chlamydomonas reinhardtii

(2012) B. B. Fischer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome and low-iron response of an oceanic diatom adapted to chronic iron limitation

(2012) Markus Lommer et al.   GENOME BIOLOGY

Transcriptome sequencing and annotation of the microalgae Dunaliella tertiolecta: Pathway description and gene discovery for production of next-generation biofuels

(2011) Hamid Rismani-Yazdi et al.   BMC GENOMICS

First generation biofuels compete

(2010) Marshall A. Martin   New Biotechnology

RNA-Seq Analysis of Sulfur-DeprivedChlamydomonasCells Reveals Aspects of Acclimation Critical for Cell Survival

(2010) David González-Ballester et al.   PLANT CELL

Changes in Transcript Abundance in Chlamydomonas reinhardtii following Nitrogen Deprivation Predict Diversion of Metabolism

(2010) R. Miller et al.   PLANT PHYSIOLOGY

Algal Lipid Bodies: Stress Induction, Purification, and Biochemical Characterization in Wild-Type and StarchlessChlamydomonas reinhardtii

(2009) Zi Teng Wang et al.   EUKARYOTIC CELL

Exploring the human genome with functional maps

(2009) C. Huttenhower et al.   GENOME RESEARCH