Transcriptomic analysis of differential host gene expression upon uptake of symbionts: a case study with Symbiodinium and the major bioeroding sponge Cliona varians

Nearly Complete 28S rRNA Gene Sequences Confirm New Hypotheses of Sponge Evolution

(2013) Robert W. Thacker et al.   INTEGRATIVE AND COMPARATIVE BIOLOGY

Pheromone Evolution, Reproductive Genes, and Comparative Transcriptomics in Mediterranean Earthworms (Annelida, Oligochaeta, Hormogastridae)

(2013) Marta Novo et al.   MOLECULAR BIOLOGY AND EVOLUTION

A NGS approach to the encrusting Mediterranean spongeCrella elegans(Porifera, Demospongiae, Poecilosclerida): transcriptome sequencing, characterization and overview of the gene expression along three life cycle stages

(2013) A. R. Pérez-Porro et al.   Molecular Ecology Resources

Reconstruction of Family-Level Phylogenetic Relationships within Demospongiae (Porifera) Using Nuclear Encoded Housekeeping Genes

(2013) Malcolm S. Hill et al.   PLoS One

The magnesium inhibition and arrested phagosome hypotheses: new perspectives on the evolution and ecology ofSymbiodiniumsymbioses

(2012) Hill Malcolm et al.   BIOLOGICAL REVIEWS

Experimental manipulation of sponge/bacterial symbiont community composition with antibiotics: sponge cell aggregates as a unique tool to study animal/microorganism symbiosis

(2012) Crystal Richardson et al.   FEMS MICROBIOLOGY ECOLOGY

Landscape requirements of a primate population in a human-dominated environment

(2012) Tali S Hoffman et al.   Frontiers in Zoology

Heterotrophic feeding as a newly identified survival strategy of the dinoflagellate Symbiodinium

(2012) H. J. Jeong et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

RNA interference in marine and freshwater sponges: actin knockdown in Tethya wilhelma and Ephydatia muelleri by ingested dsRNA expressing bacteria

(2011) Ajna S Rivera et al.   BMC BIOTECHNOLOGY

The maternal and early embryonic transcriptome of the milkweed bug Oncopeltus fasciatus

(2011) Ben Ewen-Campen et al.   BMC GENOMICS

Symbiodinium diversity among host clionaid sponges from Caribbean and Pacific reefs: Evidence of heteroplasmy and putative host-specific symbiont lineages

(2011) Malcolm Hill et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms

(2011) Fran Supek et al.   PLoS One

Projecting Coral Reef Futures Under Global Warming and Ocean Acidification

(2011) J. M. Pandolfi et al.   SCIENCE

Complex Diel Cycles of Gene Expression in Coral-Algal Symbiosis

(2011) O. Levy et al.   SCIENCE

Adaptations to Endosymbiosis in a Cnidarian-Dinoflagellate Association: Differential Gene Expression and Specific Gene Duplications

(2011) Philippe Ganot et al.   PLoS Genetics

Is the coral-algae symbiosis really ‘mutually beneficial’ for the partners?

(2010) Scott A. Wooldridge   BIOESSAYS

Population-level transcriptome sequencing of nonmodel organisms Erynnis propertius and Papilio zelicaon

(2010) Shawn T O'Neil et al.   BMC GENOMICS

Symbiont genomics, our new tangled bank

(2010) M. Medina et al.   GENOMICS

Profiling Differential Gene Expression of Symbiotic and Aposymbiotic Corals Using a High Coverage Gene Expression Profiling (HiCEP) Analysis

(2010) Ikuko Yuyama et al.   MARINE BIOTECHNOLOGY

Coral host transcriptomic states are correlated withSymbiodiniumgenotypes

(2010) M. K. DeSALVO et al.   MOLECULAR ECOLOGY

A new Symbiodinium clade (Dinophyceae) from soritid foraminifera in Hawai’i

(2010) Xavier Pochon et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

HIGS: Host-Induced Gene Silencing in the Obligate Biotrophic Fungal PathogenBlumeria graminis

(2010) Daniela Nowara et al.   PLANT CELL

The Impact of Climate Change on the World's Marine Ecosystems

(2010) O. Hoegh-Guldberg et al.   SCIENCE

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Generation and analysis of transcriptomic resources for a model system on the rise: the sea anemone Aiptasia pallida and its dinoflagellate endosymbiont

(2009) Shinichi Sunagawa et al.   BMC GENOMICS

Disease incidence is related to bleaching extent in reef-building corals

(2009) Marilyn E. Brandt et al.   ECOLOGY

The host transcriptome remains unaltered during the establishment of coral-algal symbioses

(2009) CHRISTIAN R. VOOLSTRA et al.   MOLECULAR ECOLOGY

The molecular basis of allorecognition in ascidians

(2008) Rachel Ben-Shlomo   BIOESSAYS

Phylogenetic relationships among zooxanthellae (Symbiodinium) associated to excavating sponges (Cliona spp.) reveal an unexpected lineage in the Caribbean

(2008) C. Granados et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Cell biology in model systems as the key to understanding corals

(2008) Virginia M. Weis et al.   TRENDS IN ECOLOGY & EVOLUTION