RNA-seq analyses of gene expression in the microsclerotia of Verticillium dahliae

Identification of Pathogenicity-Related Genes in the Vascular Wilt Fungus Verticillium dahliae by Agrobacterium tumefaciens-Mediated T-DNA Insertional Mutagenesis

(2011) K. Maruthachalam et al.   MOLECULAR BIOTECHNOLOGY

Comparative Genomics Yields Insights into Niche Adaptation of Plant Vascular Wilt Pathogens

(2011) Steven J. Klosterman et al.   PLoS Pathogens

High diversity of polyketide synthase genes and the melanin biosynthesis gene cluster in Penicillium marneffei

(2010) Patrick C. Y. Woo et al.   FEBS Journal

Hydrogen peroxide is involved in the sclerotial differentiation of filamentous phytopathogenic fungi

(2010) I. Papapostolou et al.   JOURNAL OF APPLIED MICROBIOLOGY

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

A Glutamic Acid-Rich Protein Identified in Verticillium dahliae from an Insertional Mutagenesis Affects Microsclerotial Formation and Pathogenicity

(2010) Feng Gao et al.   PLoS One

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

Melanin synthesis by Sclerotinia sclerotiorum

(2009) Michael J. Butler et al.   MYCOLOGIA

Microsclerotia development in Verticillium dahliae: Regulation and differential expression of the hydrophobin gene VDH1

(2008) Anna Klimes et al.   FUNGAL GENETICS AND BIOLOGY

Alternative isoform regulation in human tissue transcriptomes

(2008) Eric T. Wang et al.   NATURE

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS